BacMap

Definition	Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession	NC_010397
Length	5,067,172

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The map label for this gene is hflB [C]

Identifier: 169627451

GI number: 169627451

Start: 344374

End: 345588

Strand: Direct

Name: hflB [C]

Synonym: MAB_0347

Alternate gene names: 169627451

Gene position: 344374-345588 (Clockwise)

Preceding gene: 169627450

Following gene: 169627452

Centisome position: 6.8

GC content: 63.62

Gene sequence:

>1215_bases
GTGGCCAACGACGCCGTGATCACCGAGATGCTGGCCGCGGTGGAGGCCAGTCCCGACGTTCTCGCGCTGCGATTGCGTGT
CATCGAGCTGCTGATCTCAAGCCGCCGCTTTGCCGAGGCGCTGAATCACTGCACCGTGGCGTTGCAGCAGGCGCCGGGAG
ACGCCAGGGCGCTGGAATTGCTCGCCGCATGTTCGGCCGGCCTGAACTCTCCGGCTCCTGAGCCGGTAGCGGCCTCGGCG
GGCTTTGACTGGTCGGCGGCCGAGGATCAAGTGGCCGATATCGTCCGGCCCGCCTTCGTCGAGGAAGAGCCCGAACCATT
GGGGCCGAACGATGTGGGGGCGTTGGAGAAATCCGATGTGCGGCTCGCGGACGTCGGCGGTATGGCCGATGTCAAACGAC
AGTTGGACCTCTCATTGTTCGGGCCGCTCCGCAATCCCGAGTTGGTCAAGGCCTTTGGCGTCTCGGCCAGAGGCGGCCTG
CTGCTGTATGGGCCGCCGGGATGCGGCAAGACCTTCCTGGCCCGTGCGGTGGCCGGTGAACTGGGCGCCAATTTCTATCC
CGTCGGTATCGCGGATGTCATGCATCCGATCTTTGGCCAGAGCGAACAACGGATGCATGAGATCTTTGAGATCGCACGGC
GCAATGCGCCGTGTGTGCTGTTCTTCGATGAACTGGACGCTCTGGGGCATCGCCGTTCGCAGCTGTCGGGAAGTTCGGGG
CTGCGGCCGCTGGTGAATCAGCTTCTGGCAGAGCTAGACCCGGCGACTGAGAGTAACGAGGGGCTTTACGTCCTGGGTGC
TACCAACCACCCATGGGATGTGGACGCCGCGCTGCGCAGGCCCGGACGGTTCGACCGGATGATCTTGGTGGCGTTGCCTG
ACGAGGAGGCGCGGATCGCCATCGTCAAGTACCACCTGCGAGATCGGCCGCTTGAAGGCATCAATCTGAAATCAATCGCC
AAGCGCACCGAGGGGCGCTCGGGCGCCGACCTGGCCCATATCTGCAACACCGCTACTCAATTCGCGATGGCCGACTCGAT
CAGTACCGGGCAGGTGCGGCCGGTACGGATGGCAGATATCGACACGGCCATCGCACAGGTGGGTGCCAGTGCGGGCGGCT
GGTTCGACACCGCGCGCAATGTTGTCGAATTCTCCAACTCGGACGGCACCTATGATGAGTTGGCAAAGTATCTGCGCCAT
AGGCGATCTCGGTGA

Upstream 100 bases:

>100_bases
AGACGATAGCGCGTGCTTACGTCTTCCAACGCTGCCCGGTGCGGAACGCAGGAACGCGCGGTCATATCGTCACCGAGCGA
ACTAACGCAGGGGGAATTCC

Downstream 100 bases:

>100_bases
CTTCAGCTGACGATACCCCGTTGGCTCGTGCGCTGATGATCGAAGAGCTGATCGGGATACGCCAGTACGACACCGCACGG
ATTCAACTTGCCGAGGCGCT

Product: cell division control protein 48 CDC48

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MANDAVITEMLAAVEASPDVLALRLRVIELLISSRRFAEALNHCTVALQQAPGDARALELLAACSAGLNSPAPEPVAASA
GFDWSAAEDQVADIVRPAFVEEEPEPLGPNDVGALEKSDVRLADVGGMADVKRQLDLSLFGPLRNPELVKAFGVSARGGL
LLYGPPGCGKTFLARAVAGELGANFYPVGIADVMHPIFGQSEQRMHEIFEIARRNAPCVLFFDELDALGHRRSQLSGSSG
LRPLVNQLLAELDPATESNEGLYVLGATNHPWDVDAALRRPGRFDRMILVALPDEEARIAIVKYHLRDRPLEGINLKSIA
KRTEGRSGADLAHICNTATQFAMADSISTGQVRPVRMADIDTAIAQVGASAGGWFDTARNVVEFSNSDGTYDELAKYLRH
RRSR

Sequences:

>Translated_404_residues
MANDAVITEMLAAVEASPDVLALRLRVIELLISSRRFAEALNHCTVALQQAPGDARALELLAACSAGLNSPAPEPVAASA
GFDWSAAEDQVADIVRPAFVEEEPEPLGPNDVGALEKSDVRLADVGGMADVKRQLDLSLFGPLRNPELVKAFGVSARGGL
LLYGPPGCGKTFLARAVAGELGANFYPVGIADVMHPIFGQSEQRMHEIFEIARRNAPCVLFFDELDALGHRRSQLSGSSG
LRPLVNQLLAELDPATESNEGLYVLGATNHPWDVDAALRRPGRFDRMILVALPDEEARIAIVKYHLRDRPLEGINLKSIA
KRTEGRSGADLAHICNTATQFAMADSISTGQVRPVRMADIDTAIAQVGASAGGWFDTARNVVEFSNSDGTYDELAKYLRH
RRSR
>Mature_403_residues
ANDAVITEMLAAVEASPDVLALRLRVIELLISSRRFAEALNHCTVALQQAPGDARALELLAACSAGLNSPAPEPVAASAG
FDWSAAEDQVADIVRPAFVEEEPEPLGPNDVGALEKSDVRLADVGGMADVKRQLDLSLFGPLRNPELVKAFGVSARGGLL
LYGPPGCGKTFLARAVAGELGANFYPVGIADVMHPIFGQSEQRMHEIFEIARRNAPCVLFFDELDALGHRRSQLSGSSGL
RPLVNQLLAELDPATESNEGLYVLGATNHPWDVDAALRRPGRFDRMILVALPDEEARIAIVKYHLRDRPLEGINLKSIAK
RTEGRSGADLAHICNTATQFAMADSISTGQVRPVRMADIDTAIAQVGASAGGWFDTARNVVEFSNSDGTYDELAKYLRHR
RSR

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI6005942, Length=231, Percent_Identity=42.8571428571429, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI45643125, Length=231, Percent_Identity=40.2597402597403, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI45643123, Length=231, Percent_Identity=40.2597402597403, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI157671927, Length=236, Percent_Identity=37.7118644067797, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI300192933, Length=240, Percent_Identity=39.1666666666667, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI195539395, Length=249, Percent_Identity=37.7510040160643, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI7019569, Length=223, Percent_Identity=37.6681614349776, Blast_Score=155, Evalue=7e-38,
Organism=Homo sapiens, GI24497435, Length=248, Percent_Identity=36.6935483870968, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI21327685, Length=235, Percent_Identity=38.2978723404255, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI7657689, Length=235, Percent_Identity=38.2978723404255, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI17865802, Length=245, Percent_Identity=33.8775510204082, Blast_Score=148, Evalue=8e-36,
Organism=Homo sapiens, GI229577436, Length=255, Percent_Identity=34.1176470588235, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI5901990, Length=274, Percent_Identity=31.7518248175182, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI14149767, Length=270, Percent_Identity=31.8518518518519, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI62177112, Length=270, Percent_Identity=31.8518518518519, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI4506209, Length=231, Percent_Identity=36.7965367965368, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI24497618, Length=238, Percent_Identity=38.2352941176471, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI4505725, Length=227, Percent_Identity=36.5638766519824, Blast_Score=138, Evalue=7e-33,
Organism=Homo sapiens, GI226371754, Length=233, Percent_Identity=34.3347639484979, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI24430155, Length=234, Percent_Identity=34.1880341880342, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI5729991, Length=234, Percent_Identity=34.1880341880342, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI89064750, Length=234, Percent_Identity=34.1880341880342, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI194018488, Length=237, Percent_Identity=39.662447257384, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI4507173, Length=225, Percent_Identity=37.7777777777778, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI24430151, Length=224, Percent_Identity=34.8214285714286, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI153792536, Length=235, Percent_Identity=36.1702127659575, Blast_Score=132, Evalue=8e-31,
Organism=Homo sapiens, GI21361144, Length=231, Percent_Identity=32.034632034632, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI156564401, Length=227, Percent_Identity=34.8017621145374, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI310125280, Length=227, Percent_Identity=34.8017621145374, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI31742536, Length=261, Percent_Identity=30.2681992337165, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI112789543, Length=261, Percent_Identity=30.2681992337165, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI40806170, Length=261, Percent_Identity=31.8007662835249, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI310125282, Length=218, Percent_Identity=35.3211009174312, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI11875211, Length=261, Percent_Identity=31.8007662835249, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI31377644, Length=269, Percent_Identity=28.996282527881, Blast_Score=118, Evalue=8e-27,
Organism=Homo sapiens, GI64084766, Length=267, Percent_Identity=29.9625468164794, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI116292174, Length=293, Percent_Identity=31.740614334471, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI40806173, Length=140, Percent_Identity=38.5714285714286, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI75677353, Length=211, Percent_Identity=31.2796208530806, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI283436222, Length=222, Percent_Identity=29.2792792792793, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI283436220, Length=222, Percent_Identity=29.2792792792793, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI283436224, Length=222, Percent_Identity=29.2792792792793, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI194018490, Length=211, Percent_Identity=30.3317535545024, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI1789568, Length=249, Percent_Identity=40.1606425702811, Blast_Score=163, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17532375, Length=236, Percent_Identity=41.5254237288136, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17531535, Length=304, Percent_Identity=36.8421052631579, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17537217, Length=232, Percent_Identity=41.3793103448276, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17508053, Length=235, Percent_Identity=38.7234042553192, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI71987364, Length=229, Percent_Identity=40.6113537117904, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI71987372, Length=229, Percent_Identity=40.6113537117904, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI25153574, Length=290, Percent_Identity=34.8275862068965, Blast_Score=151, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI25144278, Length=222, Percent_Identity=38.2882882882883, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17554786, Length=222, Percent_Identity=38.2882882882883, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI25144281, Length=222, Percent_Identity=38.2882882882883, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI193209502, Length=229, Percent_Identity=38.4279475982533, Blast_Score=148, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI71994521, Length=237, Percent_Identity=37.5527426160338, Blast_Score=145, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI25146157, Length=287, Percent_Identity=32.7526132404181, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17554264, Length=205, Percent_Identity=39.0243902439024, Blast_Score=141, Evalue=6e-34,
Organism=Caenorhabditis elegans, GI17562804, Length=246, Percent_Identity=37.8048780487805, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17563248, Length=231, Percent_Identity=36.7965367965368, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI86561515, Length=227, Percent_Identity=33.4801762114537, Blast_Score=137, Evalue=7e-33,
Organism=Caenorhabditis elegans, GI17508421, Length=284, Percent_Identity=34.5070422535211, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI32563584, Length=287, Percent_Identity=34.1463414634146, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17563250, Length=224, Percent_Identity=34.8214285714286, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17505546, Length=253, Percent_Identity=32.0158102766798, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI193206114, Length=245, Percent_Identity=36.734693877551, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI133931034, Length=245, Percent_Identity=36.734693877551, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI193206116, Length=245, Percent_Identity=36.734693877551, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17541226, Length=264, Percent_Identity=31.8181818181818, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17541224, Length=264, Percent_Identity=31.8181818181818, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI115534323, Length=298, Percent_Identity=30.8724832214765, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17508701, Length=231, Percent_Identity=30.7359307359307, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17554784, Length=226, Percent_Identity=33.1858407079646, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17560432, Length=252, Percent_Identity=32.5396825396825, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI133901662, Length=220, Percent_Identity=34.5454545454545, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI133901658, Length=220, Percent_Identity=34.5454545454545, Blast_Score=113, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6320077, Length=264, Percent_Identity=40.9090909090909, Blast_Score=192, Evalue=7e-50,
Organism=Saccharomyces cerevisiae, GI6322994, Length=298, Percent_Identity=35.9060402684564, Blast_Score=173, Evalue=4e-44,
Organism=Saccharomyces cerevisiae, GI6323429, Length=240, Percent_Identity=39.5833333333333, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6324000, Length=275, Percent_Identity=34.5454545454545, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6325431, Length=249, Percent_Identity=34.9397590361446, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6322651, Length=237, Percent_Identity=37.1308016877637, Blast_Score=153, Evalue=6e-38,
Organism=Saccharomyces cerevisiae, GI6325281, Length=227, Percent_Identity=38.3259911894273, Blast_Score=152, Evalue=9e-38,
Organism=Saccharomyces cerevisiae, GI6324833, Length=247, Percent_Identity=34.8178137651822, Blast_Score=145, Evalue=8e-36,
Organism=Saccharomyces cerevisiae, GI6321390, Length=224, Percent_Identity=36.1607142857143, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6322704, Length=231, Percent_Identity=36.7965367965368, Blast_Score=144, Evalue=4e-35,
Organism=Saccharomyces cerevisiae, GI6323736, Length=229, Percent_Identity=38.8646288209607, Blast_Score=143, Evalue=5e-35,
Organism=Saccharomyces cerevisiae, GI6321709, Length=239, Percent_Identity=35.9832635983264, Blast_Score=138, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6320197, Length=224, Percent_Identity=33.9285714285714, Blast_Score=129, Evalue=6e-31,
Organism=Saccharomyces cerevisiae, GI6325183, Length=293, Percent_Identity=29.6928327645051, Blast_Score=129, Evalue=9e-31,
Organism=Saccharomyces cerevisiae, GI6324691, Length=257, Percent_Identity=33.0739299610895, Blast_Score=129, Evalue=9e-31,
Organism=Saccharomyces cerevisiae, GI6321465, Length=225, Percent_Identity=35.5555555555556, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6320854, Length=240, Percent_Identity=35.8333333333333, Blast_Score=127, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6320602, Length=179, Percent_Identity=36.3128491620112, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6320887, Length=281, Percent_Identity=27.0462633451957, Blast_Score=117, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6319554, Length=274, Percent_Identity=30.2919708029197, Blast_Score=114, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6320583, Length=153, Percent_Identity=33.9869281045752, Blast_Score=78, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17137560, Length=236, Percent_Identity=41.5254237288136, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI161076488, Length=236, Percent_Identity=41.5254237288136, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI161076486, Length=236, Percent_Identity=41.5254237288136, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI45552965, Length=244, Percent_Identity=39.7540983606557, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI281365776, Length=244, Percent_Identity=39.7540983606557, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI24660075, Length=244, Percent_Identity=39.7540983606557, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI24652279, Length=192, Percent_Identity=45.3125, Blast_Score=168, Evalue=5e-42,
Organism=Drosophila melanogaster, GI24656825, Length=246, Percent_Identity=39.0243902439024, Blast_Score=163, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24656820, Length=248, Percent_Identity=38.7096774193548, Blast_Score=163, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24640100, Length=249, Percent_Identity=38.9558232931727, Blast_Score=158, Evalue=6e-39,
Organism=Drosophila melanogaster, GI24644145, Length=323, Percent_Identity=31.8885448916409, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI19921202, Length=296, Percent_Identity=33.1081081081081, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI281360142, Length=304, Percent_Identity=31.9078947368421, Blast_Score=151, Evalue=7e-37,
Organism=Drosophila melanogaster, GI21357333, Length=304, Percent_Identity=31.9078947368421, Blast_Score=151, Evalue=7e-37,
Organism=Drosophila melanogaster, GI281360146, Length=304, Percent_Identity=31.9078947368421, Blast_Score=151, Evalue=9e-37,
Organism=Drosophila melanogaster, GI281360138, Length=304, Percent_Identity=31.9078947368421, Blast_Score=151, Evalue=9e-37,
Organism=Drosophila melanogaster, GI281360144, Length=304, Percent_Identity=31.9078947368421, Blast_Score=151, Evalue=1e-36,
Organism=Drosophila melanogaster, GI281360140, Length=304, Percent_Identity=31.9078947368421, Blast_Score=151, Evalue=1e-36,
Organism=Drosophila melanogaster, GI281360136, Length=304, Percent_Identity=31.9078947368421, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24644411, Length=304, Percent_Identity=31.9078947368421, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI18859657, Length=231, Percent_Identity=35.9307359307359, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24651451, Length=223, Percent_Identity=38.1165919282511, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI19920408, Length=247, Percent_Identity=37.246963562753, Blast_Score=149, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24658770, Length=256, Percent_Identity=37.890625, Blast_Score=149, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24663015, Length=232, Percent_Identity=38.3620689655172, Blast_Score=148, Evalue=8e-36,
Organism=Drosophila melanogaster, GI24665814, Length=243, Percent_Identity=37.8600823045267, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI28574878, Length=243, Percent_Identity=37.8600823045267, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI281363136, Length=246, Percent_Identity=38.6178861788618, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI78707192, Length=246, Percent_Identity=38.6178861788618, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24639391, Length=227, Percent_Identity=38.3259911894273, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI18860063, Length=326, Percent_Identity=29.7546012269939, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI17137738, Length=231, Percent_Identity=35.4978354978355, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24649446, Length=224, Percent_Identity=35.7142857142857, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI281361487, Length=234, Percent_Identity=32.4786324786325, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24581396, Length=261, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=5e-30,
Organism=Drosophila melanogaster, GI20129423, Length=235, Percent_Identity=32.3404255319149, Blast_Score=128, Evalue=6e-30,
Organism=Drosophila melanogaster, GI21355121, Length=240, Percent_Identity=35, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI17738151, Length=258, Percent_Identity=31.3953488372093, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI28571849, Length=226, Percent_Identity=36.283185840708, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI28571847, Length=226, Percent_Identity=36.283185840708, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI20129529, Length=245, Percent_Identity=28.9795918367347, Blast_Score=114, Evalue=9e-26,
Organism=Drosophila melanogaster, GI28573010, Length=213, Percent_Identity=33.8028169014084, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI17864540, Length=213, Percent_Identity=35.6807511737089, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24639486, Length=189, Percent_Identity=32.8042328042328, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI45554047, Length=167, Percent_Identity=34.7305389221557, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR001984
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 43511; Mature: 43380

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00674 AAA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANDAVITEMLAAVEASPDVLALRLRVIELLISSRRFAEALNHCTVALQQAPGDARALEL
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAACSAGLNSPAPEPVAASAGFDWSAAEDQVADIVRPAFVEEEPEPLGPNDVGALEKSDV
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE
RLADVGGMADVKRQLDLSLFGPLRNPELVKAFGVSARGGLLLYGPPGCGKTFLARAVAGE
EEECCCCHHHHHHHHCHHHCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHH
LGANFYPVGIADVMHPIFGQSEQRMHEIFEIARRNAPCVLFFDELDALGHRRSQLSGSSG
HCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCC
LRPLVNQLLAELDPATESNEGLYVLGATNHPWDVDAALRRPGRFDRMILVALPDEEARIA
CHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCEEEEEECCCCCEEE
IVKYHLRDRPLEGINLKSIAKRTEGRSGADLAHICNTATQFAMADSISTGQVRPVRMADI
EEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHH
DTAIAQVGASAGGWFDTARNVVEFSNSDGTYDELAKYLRHRRSR
HHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANDAVITEMLAAVEASPDVLALRLRVIELLISSRRFAEALNHCTVALQQAPGDARALEL
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAACSAGLNSPAPEPVAASAGFDWSAAEDQVADIVRPAFVEEEPEPLGPNDVGALEKSDV
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE
RLADVGGMADVKRQLDLSLFGPLRNPELVKAFGVSARGGLLLYGPPGCGKTFLARAVAGE
EEECCCCHHHHHHHHCHHHCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHH
LGANFYPVGIADVMHPIFGQSEQRMHEIFEIARRNAPCVLFFDELDALGHRRSQLSGSSG
HCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCC
LRPLVNQLLAELDPATESNEGLYVLGATNHPWDVDAALRRPGRFDRMILVALPDEEARIA
CHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCEEEEEECCCCCEEE
IVKYHLRDRPLEGINLKSIAKRTEGRSGADLAHICNTATQFAMADSISTGQVRPVRMADI
EEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHH
DTAIAQVGASAGGWFDTARNVVEFSNSDGTYDELAKYLRHRRSR
HHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]