| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627450
Identifier: 169627450
GI number: 169627450
Start: 343042
End: 344208
Strand: Direct
Name: 169627450
Synonym: MAB_0346
Alternate gene names: NA
Gene position: 343042-344208 (Clockwise)
Preceding gene: 169627449
Following gene: 169627451
Centisome position: 6.77
GC content: 67.44
Gene sequence:
>1167_bases GTGGCGCCGGGTGGTGCCGGACGGGAGACGCGCGTGCGGCTGGTCGCGGTGTTGGTAACCGCCGCAACGCTTGTCGTCGC CGAGCTGTTGGGTGACGCATCGGCATCGGCGGACCCGCTGCGCCCCGTTTCGCCACCGCTTGATCCCGGCGAGGTGGTGC GCATCGGGCCCGTCGCGGGCACCGGCACCGCGACCGCCGAGTACAACCTGGGTGCGACCGATTTATGCGAGTTCATGGTC TTCACCGGCGGCATGCTGCAGGTCTGTGGTGACAGCTTCGCCGGTCAGGGCGTGGGGTATGGCGGGTGGCACTCGCCCGT CGCGCTGCGTGTGGACACCGAGTCCGTGCCGGACGCCACCGGCGTCCGGCACTCCGGCGTCCTGGGCACCGACCGGCCGC TGCTGGCCGACGCGGCCCCGCCGGGATTCTCCCAGCTGCCTTCGGGTGTGATCGATATCAACGGAACCAACTGGTTGTTG GTCGCCGTCACCAAGAATCTGGTTCCGCAGTCGACACGCTTGGTCAAGCCTGACCCATTTCGGGCCGGATGGGCGACCGT ACCCGGGTCGGTGCGTCCGGGTGACTATGAGGGCGGCCGGCAGACACAGATCAGCGGCTACTACGACCCGCTGTGGACCC AGGACTCGCCCAAGGGCTGGGTGTACATCGTCAGCGATGGATTCGACCGTAGTCATCCCGCGGTGCTGTATCGGGCCAAG CCGGACACCTTCACCGACCGTGCGACGTGGCAGGGCTGGGGCGTGGACGCGCAGGGTAAGGGAGCGTGGGGGCGTCCCCC GACGCCGCTGTGGGGCGATCACCTGGGTGAGATGAGCATGAAGCTGGTCGATGGACAGGCGGTGCTGTCGTACTTCAACC AGACCACCGGCAACGTCGAGGTGCGGGTCGCCGACAGCCCGACACGACTCGGCGCGGTACCGGTGACGACAGTGGTCAAT GCCGGGGCCTGGCCCGCCGTCGCCGACGAACTACCGGAGTCTTGGGATAACACCCTGGCTCAGCCCTATGGCGGCTACAT CGGTCCGGATTCCACTCTGGACCGTCTCAGCATCTACGTCAGCCAGTGGAACACCGACTCGCGTGACCATGCCCCCTATC GGGTGATCGAATTCGCAGTGAACCCGCTGCGTGCCGGTGTGGGCTAA
Upstream 100 bases:
>100_bases CCCGGCCCGGGGCTGGGTACGCCGCCTCCGCCCCGGCCGTAGTTGGCCCGTAGCGACCCGCGCCCGGTGCCACTGACTAC CCTGTGAGCTTTGAGGCTCA
Downstream 100 bases:
>100_bases CTAATACTCACGTGAGATCGATGTTCTCGACGTCGGTACGACCGCCTGGTTACGATGGCATCCGCAGACGATAGCGCGTG CTTACGTCTTCCAACGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MAPGGAGRETRVRLVAVLVTAATLVVAELLGDASASADPLRPVSPPLDPGEVVRIGPVAGTGTATAEYNLGATDLCEFMV FTGGMLQVCGDSFAGQGVGYGGWHSPVALRVDTESVPDATGVRHSGVLGTDRPLLADAAPPGFSQLPSGVIDINGTNWLL VAVTKNLVPQSTRLVKPDPFRAGWATVPGSVRPGDYEGGRQTQISGYYDPLWTQDSPKGWVYIVSDGFDRSHPAVLYRAK PDTFTDRATWQGWGVDAQGKGAWGRPPTPLWGDHLGEMSMKLVDGQAVLSYFNQTTGNVEVRVADSPTRLGAVPVTTVVN AGAWPAVADELPESWDNTLAQPYGGYIGPDSTLDRLSIYVSQWNTDSRDHAPYRVIEFAVNPLRAGVG
Sequences:
>Translated_388_residues MAPGGAGRETRVRLVAVLVTAATLVVAELLGDASASADPLRPVSPPLDPGEVVRIGPVAGTGTATAEYNLGATDLCEFMV FTGGMLQVCGDSFAGQGVGYGGWHSPVALRVDTESVPDATGVRHSGVLGTDRPLLADAAPPGFSQLPSGVIDINGTNWLL VAVTKNLVPQSTRLVKPDPFRAGWATVPGSVRPGDYEGGRQTQISGYYDPLWTQDSPKGWVYIVSDGFDRSHPAVLYRAK PDTFTDRATWQGWGVDAQGKGAWGRPPTPLWGDHLGEMSMKLVDGQAVLSYFNQTTGNVEVRVADSPTRLGAVPVTTVVN AGAWPAVADELPESWDNTLAQPYGGYIGPDSTLDRLSIYVSQWNTDSRDHAPYRVIEFAVNPLRAGVG >Mature_387_residues APGGAGRETRVRLVAVLVTAATLVVAELLGDASASADPLRPVSPPLDPGEVVRIGPVAGTGTATAEYNLGATDLCEFMVF TGGMLQVCGDSFAGQGVGYGGWHSPVALRVDTESVPDATGVRHSGVLGTDRPLLADAAPPGFSQLPSGVIDINGTNWLLV AVTKNLVPQSTRLVKPDPFRAGWATVPGSVRPGDYEGGRQTQISGYYDPLWTQDSPKGWVYIVSDGFDRSHPAVLYRAKP DTFTDRATWQGWGVDAQGKGAWGRPPTPLWGDHLGEMSMKLVDGQAVLSYFNQTTGNVEVRVADSPTRLGAVPVTTVVNA GAWPAVADELPESWDNTLAQPYGGYIGPDSTLDRLSIYVSQWNTDSRDHAPYRVIEFAVNPLRAGVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41065; Mature: 40934
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPGGAGRETRVRLVAVLVTAATLVVAELLGDASASADPLRPVSPPLDPGEVVRIGPVAG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCC TGTATAEYNLGATDLCEFMVFTGGMLQVCGDSFAGQGVGYGGWHSPVALRVDTESVPDAT CCCCEEECCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC GVRHSGVLGTDRPLLADAAPPGFSQLPSGVIDINGTNWLLVAVTKNLVPQSTRLVKPDPF CCCCCCCCCCCCCCEECCCCCCHHHCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCC RAGWATVPGSVRPGDYEGGRQTQISGYYDPLWTQDSPKGWVYIVSDGFDRSHPAVLYRAK CCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEC PDTFTDRATWQGWGVDAQGKGAWGRPPTPLWGDHLGEMSMKLVDGQAVLSYFNQTTGNVE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECHHHHHHHHHCCCCCEE VRVADSPTRLGAVPVTTVVNAGAWPAVADELPESWDNTLAQPYGGYIGPDSTLDRLSIYV EEECCCCCCCCCEEHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEE SQWNTDSRDHAPYRVIEFAVNPLRAGVG EECCCCCCCCCCEEEEEEHHHHHHCCCC >Mature Secondary Structure APGGAGRETRVRLVAVLVTAATLVVAELLGDASASADPLRPVSPPLDPGEVVRIGPVAG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCC TGTATAEYNLGATDLCEFMVFTGGMLQVCGDSFAGQGVGYGGWHSPVALRVDTESVPDAT CCCCEEECCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC GVRHSGVLGTDRPLLADAAPPGFSQLPSGVIDINGTNWLLVAVTKNLVPQSTRLVKPDPF CCCCCCCCCCCCCCEECCCCCCHHHCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCC RAGWATVPGSVRPGDYEGGRQTQISGYYDPLWTQDSPKGWVYIVSDGFDRSHPAVLYRAK CCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEC PDTFTDRATWQGWGVDAQGKGAWGRPPTPLWGDHLGEMSMKLVDGQAVLSYFNQTTGNVE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECHHHHHHHHHCCCCCEE VRVADSPTRLGAVPVTTVVNAGAWPAVADELPESWDNTLAQPYGGYIGPDSTLDRLSIYV EEECCCCCCCCCEEHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEE SQWNTDSRDHAPYRVIEFAVNPLRAGVG EECCCCCCCCCCEEEEEEHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7910936 [H]