| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627452
Identifier: 169627452
GI number: 169627452
Start: 345585
End: 346640
Strand: Direct
Name: 169627452
Synonym: MAB_0348
Alternate gene names: NA
Gene position: 345585-346640 (Clockwise)
Preceding gene: 169627451
Following gene: 169627454
Centisome position: 6.82
GC content: 64.3
Gene sequence:
>1056_bases GTGACTTCAGCTGACGATACCCCGTTGGCTCGTGCGCTGATGATCGAAGAGCTGATCGGGATACGCCAGTACGACACCGC ACGGATTCAACTTGCCGAGGCGCTGACTACCTGGCCCGATGAGCCGGATCTGTTGTCGACCGGCGCATACCTGGATCTGC AGCTCGGGCACTACGCCGGGGCGATGTGGTACGCGGATAACGCGTTGCGTTTCGATCCCGGTAACGGCCAGGCCCAGCGG ATCCGCATTTCGGTGCTGCTTCGCGGCTGGAACAAGATGCCGGCCATGGCGGCCGCGCAACACCTGGTGCGGACACACCC GAATCGGGCATCGAGCCACTACATGATGGCGGTGGTGCTGTACGCCCGACGGCACAAACGTGCGGCGCTGGCTGCTATCG ACGAGGCGCTGCGCATCGATCCGGACGACTCGTCCTACCGGAACCTCCGAGGTCAGATTGTCGGGATGCGCAGTTGGAAA GGTAAGGCGCTCAAGGAGTTCCGAACGGCCCTGCGAATAGACCCGGGCAATGCCTCGGCGATGGAGAACGTTGGCAAGGC GCAGTCGCGCCGATGGCGGTTGTCGAGTGCGCTGCGTGCATACCTGGATCTGGGTGCCATGGACATCCGGCGGGCCGATG ATGTCCGGGCCGGAGTTTCCGAGGTATTCAACCGCGTGGTCAGTGTGATGATGCCGGTGAATTTCCTGGCGTTGGTGATT CTCGGCGCGTCCGCGGGGGTTGCCACGCGGTATGGCAATCATCAGCTGCCCATACCCGCGCAAGTGATCGCGGCCCTGCT GGCGATCGGCGTGATCGCGCTGCCCGTGTGGATGGTGCTGACCGTCCCGCAGCGCTCGGCTAACGCGCTGTGGGCCAGCC TGCGGCGATCGAAACTGATCAGCCTGTGCGTGGTGCTGGGTATGGCGATCGCGCTTTCTCTGCTGGTCGTCGCGGTCATC GGGTCGCGGGCCGCTGCCGAGGCCGCCTTGCCGCTCATCGCATTGCCGGTACTGATCGTCTTCGCGCTGCGCCTGGTCGC GGATTTCGTGGGTTAG
Upstream 100 bases:
>100_bases CGGGCGGCTGGTTCGACACCGCGCGCAATGTTGTCGAATTCTCCAACTCGGACGGCACCTATGATGAGTTGGCAAAGTAT CTGCGCCATAGGCGATCTCG
Downstream 100 bases:
>100_bases TCCTCGATCGGGTGCCGTTTGAGGAAGTCGTCGATCAGGGCATTGACCTCTTCGGGGCGCTCCAGCGCCGCGAGATGCCC CGTGTTCTCCATGATCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTSADDTPLARALMIEELIGIRQYDTARIQLAEALTTWPDEPDLLSTGAYLDLQLGHYAGAMWYADNALRFDPGNGQAQR IRISVLLRGWNKMPAMAAAQHLVRTHPNRASSHYMMAVVLYARRHKRAALAAIDEALRIDPDDSSYRNLRGQIVGMRSWK GKALKEFRTALRIDPGNASAMENVGKAQSRRWRLSSALRAYLDLGAMDIRRADDVRAGVSEVFNRVVSVMMPVNFLALVI LGASAGVATRYGNHQLPIPAQVIAALLAIGVIALPVWMVLTVPQRSANALWASLRRSKLISLCVVLGMAIALSLLVVAVI GSRAAAEAALPLIALPVLIVFALRLVADFVG
Sequences:
>Translated_351_residues MTSADDTPLARALMIEELIGIRQYDTARIQLAEALTTWPDEPDLLSTGAYLDLQLGHYAGAMWYADNALRFDPGNGQAQR IRISVLLRGWNKMPAMAAAQHLVRTHPNRASSHYMMAVVLYARRHKRAALAAIDEALRIDPDDSSYRNLRGQIVGMRSWK GKALKEFRTALRIDPGNASAMENVGKAQSRRWRLSSALRAYLDLGAMDIRRADDVRAGVSEVFNRVVSVMMPVNFLALVI LGASAGVATRYGNHQLPIPAQVIAALLAIGVIALPVWMVLTVPQRSANALWASLRRSKLISLCVVLGMAIALSLLVVAVI GSRAAAEAALPLIALPVLIVFALRLVADFVG >Mature_350_residues TSADDTPLARALMIEELIGIRQYDTARIQLAEALTTWPDEPDLLSTGAYLDLQLGHYAGAMWYADNALRFDPGNGQAQRI RISVLLRGWNKMPAMAAAQHLVRTHPNRASSHYMMAVVLYARRHKRAALAAIDEALRIDPDDSSYRNLRGQIVGMRSWKG KALKEFRTALRIDPGNASAMENVGKAQSRRWRLSSALRAYLDLGAMDIRRADDVRAGVSEVFNRVVSVMMPVNFLALVIL GASAGVATRYGNHQLPIPAQVIAALLAIGVIALPVWMVLTVPQRSANALWASLRRSKLISLCVVLGMAIALSLLVVAVIG SRAAAEAALPLIALPVLIVFALRLVADFVG
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38232; Mature: 38101
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSADDTPLARALMIEELIGIRQYDTARIQLAEALTTWPDEPDLLSTGAYLDLQLGHYAG CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHC AMWYADNALRFDPGNGQAQRIRISVLLRGWNKMPAMAAAQHLVRTHPNRASSHYMMAVVL CCEEECCEEEECCCCCCHHHEEEEHEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH YARRHKRAALAAIDEALRIDPDDSSYRNLRGQIVGMRSWKGKALKEFRTALRIDPGNASA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCHHH MENVGKAQSRRWRLSSALRAYLDLGAMDIRRADDVRAGVSEVFNRVVSVMMPVNFLALVI HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGASAGVATRYGNHQLPIPAQVIAALLAIGVIALPVWMVLTVPQRSANALWASLRRSKLI HCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH SLCVVLGMAIALSLLVVAVIGSRAAAEAALPLIALPVLIVFALRLVADFVG HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSADDTPLARALMIEELIGIRQYDTARIQLAEALTTWPDEPDLLSTGAYLDLQLGHYAG CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHC AMWYADNALRFDPGNGQAQRIRISVLLRGWNKMPAMAAAQHLVRTHPNRASSHYMMAVVL CCEEECCEEEECCCCCCHHHEEEEHEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH YARRHKRAALAAIDEALRIDPDDSSYRNLRGQIVGMRSWKGKALKEFRTALRIDPGNASA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCHHH MENVGKAQSRRWRLSSALRAYLDLGAMDIRRADDVRAGVSEVFNRVVSVMMPVNFLALVI HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGASAGVATRYGNHQLPIPAQVIAALLAIGVIALPVWMVLTVPQRSANALWASLRRSKLI HCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH SLCVVLGMAIALSLLVVAVIGSRAAAEAALPLIALPVLIVFALRLVADFVG HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA