| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627235
Identifier: 169627235
GI number: 169627235
Start: 127948
End: 128628
Strand: Direct
Name: 169627235
Synonym: MAB_0130
Alternate gene names: NA
Gene position: 127948-128628 (Clockwise)
Preceding gene: 169627229
Following gene: 169627237
Centisome position: 2.53
GC content: 65.49
Gene sequence:
>681_bases GTGGTGAGCATTGCGCGTTACGTGGCCGCACCTGACGGGGTGCGGCTGAGCGTGACGGTGTCGGGTACCGGACCGTCACT GGTGTTGGTGCACGGCAGTTTGCAATCCGGTTCGAGCTGGGCCGGTGTCGTCTCTGAGCTCGAGAGTGACTTCACCTGTT TCGCCGTCGACCGGCGCGGACACGGTGCGAGTTCGGACGCTGAGGAACACAGCCTGCAGCGTGAGGCCGACGATGTCATC GCGGTCGCCGCGGAGGTCGGTCCCGACGCGGTGATCGTGGCGCATTCGTACGGAGCCGTCGTCGTATTGGAGGCCGTACG TCGCGGCGCGGACGTGGCAGCTGTTGTGCTCTACGAACCGCCGCTGCCGATTTCAGAGCGAGTGGCTAGTGCGAATCGGG ACGCGAGTGCCGCGTTGCGCGGTCGATCCACGGTGGTCACCCGGGAATGGATGGCTGTGAATCGATCCGTCGAGTCGATC GGCGAGTACACGCGGGCGGCGACTCCGATGTACCTGCTGGAAGGCGCGAATTCGCCGCCTCAGTTTCGGGATCCGGTGGG CTACCTGGCTCGTCGCGTTCCTGGAGTACGAGTGAAAGAGCTTGTTGGGCAGGACCATTTCGCGCACCGCGAGGCGCCCG CGGTGTTCGCCCAGGCGCTCCGCGAACTGTTGCTGAGCTAG
Upstream 100 bases:
>100_bases GGCCAGCACAATCGCGATCTCGAGGCGGATTGTGCGCGCTGACATCTCCGATTCGGCCACGGCGCTCATTCTGGCTGGTA TTGGTGGAAGAGTGTCCGAT
Downstream 100 bases:
>100_bases ATCTTGCGGGCGCGTAGCCCGTTGAGGAACGGGCAGCCTGCCAGGATGCGCAGGGCTTGGCTCAGTCCGGCGGTGTCGTT GACGGGCTCATTGAACGGCA
Product: putative hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MVSIARYVAAPDGVRLSVTVSGTGPSLVLVHGSLQSGSSWAGVVSELESDFTCFAVDRRGHGASSDAEEHSLQREADDVI AVAAEVGPDAVIVAHSYGAVVVLEAVRRGADVAAVVLYEPPLPISERVASANRDASAALRGRSTVVTREWMAVNRSVESI GEYTRAATPMYLLEGANSPPQFRDPVGYLARRVPGVRVKELVGQDHFAHREAPAVFAQALRELLLS
Sequences:
>Translated_226_residues MVSIARYVAAPDGVRLSVTVSGTGPSLVLVHGSLQSGSSWAGVVSELESDFTCFAVDRRGHGASSDAEEHSLQREADDVI AVAAEVGPDAVIVAHSYGAVVVLEAVRRGADVAAVVLYEPPLPISERVASANRDASAALRGRSTVVTREWMAVNRSVESI GEYTRAATPMYLLEGANSPPQFRDPVGYLARRVPGVRVKELVGQDHFAHREAPAVFAQALRELLLS >Mature_226_residues MVSIARYVAAPDGVRLSVTVSGTGPSLVLVHGSLQSGSSWAGVVSELESDFTCFAVDRRGHGASSDAEEHSLQREADDVI AVAAEVGPDAVIVAHSYGAVVVLEAVRRGADVAAVVLYEPPLPISERVASANRDASAALRGRSTVVTREWMAVNRSVESI GEYTRAATPMYLLEGANSPPQFRDPVGYLARRVPGVRVKELVGQDHFAHREAPAVFAQALRELLLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23970; Mature: 23970
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00036 BZIP_BASIC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSIARYVAAPDGVRLSVTVSGTGPSLVLVHGSLQSGSSWAGVVSELESDFTCFAVDRRG CCCHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCC HGASSDAEEHSLQREADDVIAVAAEVGPDAVIVAHSYGAVVVLEAVRRGADVAAVVLYEP CCCCCCHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEEECC PLPISERVASANRDASAALRGRSTVVTREWMAVNRSVESIGEYTRAATPMYLLEGANSPP CCCHHHHHHHCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC QFRDPVGYLARRVPGVRVKELVGQDHFAHREAPAVFAQALRELLLS CCCCHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVSIARYVAAPDGVRLSVTVSGTGPSLVLVHGSLQSGSSWAGVVSELESDFTCFAVDRRG CCCHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCC HGASSDAEEHSLQREADDVIAVAAEVGPDAVIVAHSYGAVVVLEAVRRGADVAAVVLYEP CCCCCCHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEEECC PLPISERVASANRDASAALRGRSTVVTREWMAVNRSVESIGEYTRAATPMYLLEGANSPP CCCHHHHHHHCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC QFRDPVGYLARRVPGVRVKELVGQDHFAHREAPAVFAQALRELLLS CCCCHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA