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The map label for this gene is appB [H]

Identifier: 169825256

GI number: 169825256

Start: 1730182

End: 1731132

Strand: Direct

Name: appB [H]

Synonym: FMG_1559

Alternate gene names: 169825256

Gene position: 1730182-1731132 (Clockwise)

Preceding gene: 169825255

Following gene: 169825257

Centisome position: 96.25

GC content: 37.01

Gene sequence:

>951_bases
ATGACAAGACTTATACTTAGACGACTTTTACAAACCATACCTATGATAATAACTATTTCCATAGTTTCCTTTTTGCTTGT
AAGAATCGCACCATCTGACCCAGTTAGGGCAATGATAACACCTGAGTCTACAGTGGAAGACATAGAAAGAGTCAGAGAGA
ACATGGGCCTTAATGACAGTTACTTTGTTCAGTACAAAAGATGGGCAGGAGATATTTTAAAAGGCGACTTTGGCTACTCA
TTTTCAAATCACAGACCTGTGCTGGATCAGGTTACCGAAAGACTACCGGCAACTTTAGGACTTATGGGAAGTGCGTTTTT
AATTTCAATTATAGTCGGTACAATTATCGGTATTATTTCAGGAATGAGCAAAGGAGGTATAGTAGATAAGATTTTTACAC
TGCTTTCCTACATAGGAATATCCATACCTTCATTCTGGTTTGCAATGATGCTTGTGCATCTTTTTTCATTAAAATTAGGG
CTTCTTCCATCAATTGGAATGAGAACTCTTGGTGTTGAAACAACAGCAGACCTAATAAAGCACTCCATCCTACCAGTACT
TACTTTAAGCATCGGTGATACAGCTGTAATTAGTAGATATGTAAGAGCAAGGGTGATGGATCAATTAAAAGAAGATTATG
TAATGACAGAACTTGCCCAAGGTAGTTCAAAGAAAGAGCTTTTCTTTAAAAGTATTCTTAAAAACTCTCTCCTTCCACTT
ATCACGCTAGTTGGAATGAGCTTACCAAGACTTGTTTCAGGTGCCTTTATAACTGAAAGCATCTTTGGATGGCCAGGCCT
TGGACAACTTGGTATGAACTCAATCTTTACAGCAGACTACCCTCTAATAATGGCAACTACTATGTTTGCATCTGTATTAT
TAATTCTTGGAAACTTAATCTCAGATATACTTTACGGAATTGTAGACCCAAGAATAAAGGAGATGAATTAA

Upstream 100 bases:

>100_bases
CACCTATTCACATGTTTGATTACTTCAACAAGATTGAATCAAAATAATTAACTAATGAACAGTCCCTTTTTAGGGATTGT
TCATTTATTTAGGAGATAAT

Downstream 100 bases:

>100_bases
TGAAAAAACTTTTTAAAAATTTTAAATTAAGTCCCCTTAGGGTCAAATTTTCTGTTACACTTCTTCTACTCTTCATATTA
GCTGCTGTATTAGCAGACCT

Product: oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MTRLILRRLLQTIPMIITISIVSFLLVRIAPSDPVRAMITPESTVEDIERVRENMGLNDSYFVQYKRWAGDILKGDFGYS
FSNHRPVLDQVTERLPATLGLMGSAFLISIIVGTIIGIISGMSKGGIVDKIFTLLSYIGISIPSFWFAMMLVHLFSLKLG
LLPSIGMRTLGVETTADLIKHSILPVLTLSIGDTAVISRYVRARVMDQLKEDYVMTELAQGSSKKELFFKSILKNSLLPL
ITLVGMSLPRLVSGAFITESIFGWPGLGQLGMNSIFTADYPLIMATTMFASVLLILGNLISDILYGIVDPRIKEMN

Sequences:

>Translated_316_residues
MTRLILRRLLQTIPMIITISIVSFLLVRIAPSDPVRAMITPESTVEDIERVRENMGLNDSYFVQYKRWAGDILKGDFGYS
FSNHRPVLDQVTERLPATLGLMGSAFLISIIVGTIIGIISGMSKGGIVDKIFTLLSYIGISIPSFWFAMMLVHLFSLKLG
LLPSIGMRTLGVETTADLIKHSILPVLTLSIGDTAVISRYVRARVMDQLKEDYVMTELAQGSSKKELFFKSILKNSLLPL
ITLVGMSLPRLVSGAFITESIFGWPGLGQLGMNSIFTADYPLIMATTMFASVLLILGNLISDILYGIVDPRIKEMN
>Mature_315_residues
TRLILRRLLQTIPMIITISIVSFLLVRIAPSDPVRAMITPESTVEDIERVRENMGLNDSYFVQYKRWAGDILKGDFGYSF
SNHRPVLDQVTERLPATLGLMGSAFLISIIVGTIIGIISGMSKGGIVDKIFTLLSYIGISIPSFWFAMMLVHLFSLKLGL
LPSIGMRTLGVETTADLIKHSILPVLTLSIGDTAVISRYVRARVMDQLKEDYVMTELAQGSSKKELFFKSILKNSLLPLI
TLVGMSLPRLVSGAFITESIFGWPGLGQLGMNSIFTADYPLIMATTMFASVLLILGNLISDILYGIVDPRIKEMN

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=313, Percent_Identity=35.4632587859425, Blast_Score=218, Evalue=4e-58,
Organism=Escherichia coli, GI1789888, Length=317, Percent_Identity=34.384858044164, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI1789965, Length=341, Percent_Identity=31.6715542521994, Blast_Score=185, Evalue=3e-48,
Organism=Escherichia coli, GI1787497, Length=316, Percent_Identity=31.6455696202532, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1787761, Length=331, Percent_Identity=30.5135951661631, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=32.2344322344322, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1788504, Length=360, Percent_Identity=26.1111111111111, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34926; Mature: 34795

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLILRRLLQTIPMIITISIVSFLLVRIAPSDPVRAMITPESTVEDIERVRENMGLNDS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCH
YFVQYKRWAGDILKGDFGYSFSNHRPVLDQVTERLPATLGLMGSAFLISIIVGTIIGIIS
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMSKGGIVDKIFTLLSYIGISIPSFWFAMMLVHLFSLKLGLLPSIGMRTLGVETTADLIK
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHH
HSILPVLTLSIGDTAVISRYVRARVMDQLKEDYVMTELAQGSSKKELFFKSILKNSLLPL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ITLVGMSLPRLVSGAFITESIFGWPGLGQLGMNSIFTADYPLIMATTMFASVLLILGNLI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH
SDILYGIVDPRIKEMN
HHHHHHHHCCHHHCCC
>Mature Secondary Structure 
TRLILRRLLQTIPMIITISIVSFLLVRIAPSDPVRAMITPESTVEDIERVRENMGLNDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCH
YFVQYKRWAGDILKGDFGYSFSNHRPVLDQVTERLPATLGLMGSAFLISIIVGTIIGIIS
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMSKGGIVDKIFTLLSYIGISIPSFWFAMMLVHLFSLKLGLLPSIGMRTLGVETTADLIK
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHH
HSILPVLTLSIGDTAVISRYVRARVMDQLKEDYVMTELAQGSSKKELFFKSILKNSLLPL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ITLVGMSLPRLVSGAFITESIFGWPGLGQLGMNSIFTADYPLIMATTMFASVLLILGNLI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH
SDILYGIVDPRIKEMN
HHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]