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The map label for this gene is ugpA [H]

Identifier: 169823951

GI number: 169823951

Start: 299716

End: 300582

Strand: Direct

Name: ugpA [H]

Synonym: FMG_0254

Alternate gene names: 169823951

Gene position: 299716-300582 (Clockwise)

Preceding gene: 169823950

Following gene: 169823952

Centisome position: 16.67

GC content: 29.64

Gene sequence:

>867_bases
ATGAAAAAATCAAAAATGTTACCATATTTATTATTACTACCATGCTTTTTGGTAGTAATAATTCTATATGGCTATCCTAT
GGTGTTAACGTTTATTAACTCTTTCAATAAAGTTAATTTACTTACAGGTAGTTCGGATTTTATAGGATTGGCGAATTACA
AATCTATTTTTAATGATCCGCAATTCTATAAAAGTTTATCAGTAACTGTGAAGTACACAGTTATAACAGTATTTTTGAAA
ATATTTCTAGGTTTTTTACTTGCGTATTTATTATCTAGTAATATTTTTGCTAAAAAACAATTTAGATTTTTAGTTCTAAT
TCCTTGGGCTATTCCTCAAGTTGCAGTGTCAACATTGTGGAAATGGATATTAGACGGAAGATACGGTTATATTAACTACT
TCTTTATGAAATTAGGAATTATTAAAAGTCCAATTTTGTTTTTATCAGATCCTAATATTGCGTTATACTGTGCGGCATTT
GTAGATGCATGGCTAGGAATATCGTTTGTATCAATGATGTTTTTGGCAGCGTTGGAACAAATTCCGACATCTTTGTATGA
AGCAAGTGAAATAGACGGAGCGAACAAAACAAGACAATTCTTCGATATTACATTACCGGGAATTAGACAAACATTTGTTA
CAATTTTAATTTTAGTAACTATTTGGACGTTTAATTCATTCAATGTAATTTATGTATTGACACAAGGTGGACCAATGAGA
TCTACAGAAACTTTGATAATCAAAATTTACCAAGAAGCTTTCAGTAGATTCAACATAGGTGCAAGTTCTGCGTTGACAAT
GATTGTAGTAGTTATCTTGTCGCTAATGACTTTTATTTATTCAAGGAGTATGTTAAATGAGAAATAA

Upstream 100 bases:

>100_bases
TTCAACAAGAGCTTCACAATTGCAGTACAAAAAGCTATGACTGGTCAATTATCTCCACAAGAAGCTTTGGATAATTGTCA
AAAAGAATTAGCAAAGTAAA

Downstream 100 bases:

>100_bases
AAAGAATGTAAAAAGCACAATTATACTAACTATTATTGTAATTTTGCTGCTATTTCCGATAGTGATTTTGGTAAACTCAT
CATTGAAAACATACAACGAA

Product: sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKKSKMLPYLLLLPCFLVVIILYGYPMVLTFINSFNKVNLLTGSSDFIGLANYKSIFNDPQFYKSLSVTVKYTVITVFLK
IFLGFLLAYLLSSNIFAKKQFRFLVLIPWAIPQVAVSTLWKWILDGRYGYINYFFMKLGIIKSPILFLSDPNIALYCAAF
VDAWLGISFVSMMFLAALEQIPTSLYEASEIDGANKTRQFFDITLPGIRQTFVTILILVTIWTFNSFNVIYVLTQGGPMR
STETLIIKIYQEAFSRFNIGASSALTMIVVVILSLMTFIYSRSMLNEK

Sequences:

>Translated_288_residues
MKKSKMLPYLLLLPCFLVVIILYGYPMVLTFINSFNKVNLLTGSSDFIGLANYKSIFNDPQFYKSLSVTVKYTVITVFLK
IFLGFLLAYLLSSNIFAKKQFRFLVLIPWAIPQVAVSTLWKWILDGRYGYINYFFMKLGIIKSPILFLSDPNIALYCAAF
VDAWLGISFVSMMFLAALEQIPTSLYEASEIDGANKTRQFFDITLPGIRQTFVTILILVTIWTFNSFNVIYVLTQGGPMR
STETLIIKIYQEAFSRFNIGASSALTMIVVVILSLMTFIYSRSMLNEK
>Mature_288_residues
MKKSKMLPYLLLLPCFLVVIILYGYPMVLTFINSFNKVNLLTGSSDFIGLANYKSIFNDPQFYKSLSVTVKYTVITVFLK
IFLGFLLAYLLSSNIFAKKQFRFLVLIPWAIPQVAVSTLWKWILDGRYGYINYFFMKLGIIKSPILFLSDPNIALYCAAF
VDAWLGISFVSMMFLAALEQIPTSLYEASEIDGANKTRQFFDITLPGIRQTFVTILILVTIWTFNSFNVIYVLTQGGPMR
STETLIIKIYQEAFSRFNIGASSALTMIVVVILSLMTFIYSRSMLNEK

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=290, Percent_Identity=29.6551724137931, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1787570, Length=252, Percent_Identity=30.5555555555556, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1790465, Length=222, Percent_Identity=31.5315315315315, Blast_Score=98, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32849; Mature: 32849

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSKMLPYLLLLPCFLVVIILYGYPMVLTFINSFNKVNLLTGSSDFIGLANYKSIFNDP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHCCH
QFYKSLSVTVKYTVITVFLKIFLGFLLAYLLSSNIFAKKQFRFLVLIPWAIPQVAVSTLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEECCHHHHHHHHHHH
KWILDGRYGYINYFFMKLGIIKSPILFLSDPNIALYCAAFVDAWLGISFVSMMFLAALEQ
HHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPTSLYEASEIDGANKTRQFFDITLPGIRQTFVTILILVTIWTFNSFNVIYVLTQGGPMR
HHHHHHHHHHCCCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
STETLIIKIYQEAFSRFNIGASSALTMIVVVILSLMTFIYSRSMLNEK
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKSKMLPYLLLLPCFLVVIILYGYPMVLTFINSFNKVNLLTGSSDFIGLANYKSIFNDP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHCCH
QFYKSLSVTVKYTVITVFLKIFLGFLLAYLLSSNIFAKKQFRFLVLIPWAIPQVAVSTLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEECCHHHHHHHHHHH
KWILDGRYGYINYFFMKLGIIKSPILFLSDPNIALYCAAFVDAWLGISFVSMMFLAALEQ
HHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPTSLYEASEIDGANKTRQFFDITLPGIRQTFVTILILVTIWTFNSFNVIYVLTQGGPMR
HHHHHHHHHHCCCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
STETLIIKIYQEAFSRFNIGASSALTMIVVVILSLMTFIYSRSMLNEK
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA