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The map label for this gene is ycjN [C]

Identifier: 169823950

GI number: 169823950

Start: 298482

End: 299714

Strand: Direct

Name: ycjN [C]

Synonym: FMG_0253

Alternate gene names: 169823950

Gene position: 298482-299714 (Clockwise)

Preceding gene: 169823948

Following gene: 169823951

Centisome position: 16.6

GC content: 32.85

Gene sequence:

>1233_bases
ATGAAGAAAAAATTTTTGGCAATTCTTTTAGTATTCGTACTTTTCTTGTCAGCTTGTGGAAATAAAGCAGCTGATAATTC
AAAAGATGCAAAAAAAGACGAAAACAAAAAGGAAGATGTAGTAACTATTCACATGTTAGTTCCAGGATATGATCAAGGAT
ATCTAAAAGAACAATTCACAGATGCTATTGGAAGATTTGAAAAAGAAAATCCAAACATCAAAGTTGAAGTTATCAGTGCT
GGTTGGGAAGAATTAAACTCAAAAGTAGTTCAATTATACCAAGCAAAAAAAGCTCCTGATATTATGCTTTTAGGTTCAAG
ATCTTTGAGACAATTCTCTGAAAATGGTATCTTGGAAGATATGTCTTCAATGATGACTGACGAACAAAAAGCAGACTACA
TTGAAAATGTATTGAACACAGGTAAAGTTAGTGGAAAACAATTTGGTATTCCAATGGCATTATCTTCAAGAGGATTATTC
TACAGATCAGATTTGATCAAAGAAGCTCCAAAGAACTGGGAAGAATTATTAAACGTAGCAAAAGAAAACACTAAGGGAAA
TATGAAAGGATTTGCAATTCCTACAGATTTAACTAGTGGTACTGATGAAATTCTTAACTTCATTTACCAAAACGGTGGTA
AAATCGTTGACGAAAATGGTAACTTTGTTATCAATTCAAAAGAAAACGTAGAAACATTAGAATTCTTCAAAAAATTAGCA
GCATACGTTCCAGATCCAGTATCTACAACAAGAAATGACCAATCAAAAATGTTTGTTAACAACGACTTAGCAATGTACAT
TTCTGGTGGTTGGGAAAAAGAAACAATGGACAAAGGCAAGGATAAAACTCCTTACAAAGTTGCAATGTTACCAGAAGGAA
AACAAAAGGGAGTTACAATTGTAACTGACTCTTACACAATGAGTTCAATTTCTGAACACAAAAAAGAAGCTTTTGAATTT
ATTAAATTCATGGGCAAATTAGAAAATCAAAAAATCATAACTGCAGCTTATGGTTGGTTCCCAATTCTTCACAAAGAAGC
TGAAGATCCAAAATACGCTGATGATTTCAACAAACCTATGAGAGACATCATGGAATTTGGTACACCAGAACCACAAGTAC
CAAACTGGGATGATTTCAACAAGAGCTTCACAATTGCAGTACAAAAAGCTATGACTGGTCAATTATCTCCACAAGAAGCT
TTGGATAATTGTCAAAAAGAATTAGCAAAGTAA

Upstream 100 bases:

>100_bases
TTATAGAAATATCATATAATTAAATTTTATCATAGAGTTTTATACATGGTTGTGGTAAAATCAAATTGGAATATAAAATA
TAAATTGGAGGTTTTATATT

Downstream 100 bases:

>100_bases
AATGAAAAAATCAAAAATGTTACCATATTTATTATTACTACCATGCTTTTTGGTAGTAATAATTCTATATGGCTATCCTA
TGGTGTTAACGTTTATTAAC

Product: sugar ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MKKKFLAILLVFVLFLSACGNKAADNSKDAKKDENKKEDVVTIHMLVPGYDQGYLKEQFTDAIGRFEKENPNIKVEVISA
GWEELNSKVVQLYQAKKAPDIMLLGSRSLRQFSENGILEDMSSMMTDEQKADYIENVLNTGKVSGKQFGIPMALSSRGLF
YRSDLIKEAPKNWEELLNVAKENTKGNMKGFAIPTDLTSGTDEILNFIYQNGGKIVDENGNFVINSKENVETLEFFKKLA
AYVPDPVSTTRNDQSKMFVNNDLAMYISGGWEKETMDKGKDKTPYKVAMLPEGKQKGVTIVTDSYTMSSISEHKKEAFEF
IKFMGKLENQKIITAAYGWFPILHKEAEDPKYADDFNKPMRDIMEFGTPEPQVPNWDDFNKSFTIAVQKAMTGQLSPQEA
LDNCQKELAK

Sequences:

>Translated_410_residues
MKKKFLAILLVFVLFLSACGNKAADNSKDAKKDENKKEDVVTIHMLVPGYDQGYLKEQFTDAIGRFEKENPNIKVEVISA
GWEELNSKVVQLYQAKKAPDIMLLGSRSLRQFSENGILEDMSSMMTDEQKADYIENVLNTGKVSGKQFGIPMALSSRGLF
YRSDLIKEAPKNWEELLNVAKENTKGNMKGFAIPTDLTSGTDEILNFIYQNGGKIVDENGNFVINSKENVETLEFFKKLA
AYVPDPVSTTRNDQSKMFVNNDLAMYISGGWEKETMDKGKDKTPYKVAMLPEGKQKGVTIVTDSYTMSSISEHKKEAFEF
IKFMGKLENQKIITAAYGWFPILHKEAEDPKYADDFNKPMRDIMEFGTPEPQVPNWDDFNKSFTIAVQKAMTGQLSPQEA
LDNCQKELAK
>Mature_410_residues
MKKKFLAILLVFVLFLSACGNKAADNSKDAKKDENKKEDVVTIHMLVPGYDQGYLKEQFTDAIGRFEKENPNIKVEVISA
GWEELNSKVVQLYQAKKAPDIMLLGSRSLRQFSENGILEDMSSMMTDEQKADYIENVLNTGKVSGKQFGIPMALSSRGLF
YRSDLIKEAPKNWEELLNVAKENTKGNMKGFAIPTDLTSGTDEILNFIYQNGGKIVDENGNFVINSKENVETLEFFKKLA
AYVPDPVSTTRNDQSKMFVNNDLAMYISGGWEKETMDKGKDKTPYKVAMLPEGKQKGVTIVTDSYTMSSISEHKKEAFEF
IKFMGKLENQKIITAAYGWFPILHKEAEDPKYADDFNKPMRDIMEFGTPEPQVPNWDDFNKSFTIAVQKAMTGQLSPQEA
LDNCQKELAK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787569, Length=341, Percent_Identity=24.3401759530792, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46295; Mature: 46295

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKFLAILLVFVLFLSACGNKAADNSKDAKKDENKKEDVVTIHMLVPGYDQGYLKEQFT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH
DAIGRFEKENPNIKVEVISAGWEELNSKVVQLYQAKKAPDIMLLGSRSLRQFSENGILED
HHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCHHHH
MSSMMTDEQKADYIENVLNTGKVSGKQFGIPMALSSRGLFYRSDLIKEAPKNWEELLNVA
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCHHHHHHHH
KENTKGNMKGFAIPTDLTSGTDEILNFIYQNGGKIVDENGNFVINSKENVETLEFFKKLA
HHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCEEEECCCCEEEECCCCHHHHHHHHHHH
AYVPDPVSTTRNDQSKMFVNNDLAMYISGGWEKETMDKGKDKTPYKVAMLPEGKQKGVTI
HHCCCCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHCCCCCCCEEEEECCCCCCCCEEE
VTDSYTMSSISEHKKEAFEFIKFMGKLENQKIITAAYGWFPILHKEAEDPKYADDFNKPM
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHHH
RDIMEFGTPEPQVPNWDDFNKSFTIAVQKAMTGQLSPQEALDNCQKELAK
HHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKKFLAILLVFVLFLSACGNKAADNSKDAKKDENKKEDVVTIHMLVPGYDQGYLKEQFT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH
DAIGRFEKENPNIKVEVISAGWEELNSKVVQLYQAKKAPDIMLLGSRSLRQFSENGILED
HHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCHHHH
MSSMMTDEQKADYIENVLNTGKVSGKQFGIPMALSSRGLFYRSDLIKEAPKNWEELLNVA
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCHHHHHHHH
KENTKGNMKGFAIPTDLTSGTDEILNFIYQNGGKIVDENGNFVINSKENVETLEFFKKLA
HHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCEEEECCCCEEEECCCCHHHHHHHHHHH
AYVPDPVSTTRNDQSKMFVNNDLAMYISGGWEKETMDKGKDKTPYKVAMLPEGKQKGVTI
HHCCCCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHCCCCCCCEEEEECCCCCCCCEEE
VTDSYTMSSISEHKKEAFEFIKFMGKLENQKIITAAYGWFPILHKEAEDPKYADDFNKPM
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHHH
RDIMEFGTPEPQVPNWDDFNKSFTIAVQKAMTGQLSPQEALDNCQKELAK
HHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA