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The map label for this gene is yurM [H]

Identifier: 169823952

GI number: 169823952

Start: 300572

End: 301396

Strand: Direct

Name: yurM [H]

Synonym: FMG_0255

Alternate gene names: 169823952

Gene position: 300572-301396 (Clockwise)

Preceding gene: 169823951

Following gene: 169823953

Centisome position: 16.72

GC content: 31.52

Gene sequence:

>825_bases
ATGAGAAATAAAAAGAATGTAAAAAGCACAATTATACTAACTATTATTGTAATTTTGCTGCTATTTCCGATAGTGATTTT
GGTAAACTCATCATTGAAAACATACAACGAACTAATAACTTGGCCGCCAAAATTTTTCGATAGTTTTCATTTCGAAAATT
ACACAAATGTTTTGTCCGGTGACAAATCAATTCTCAAAGAATTTTTCAACAGTTTACAAATTTCTGTAATTACGATGTTG
ATTTGCATTCTAATAGGATCATTGGCAGCTTATTCCGTTACGAGATTTGATTTTAAAGGCAAAAATGCATTCATGAATAT
AATTCTTGTGACACAAATGTTTAGTTCCGTAATCGTAGTAAATGCTATGTATATTATTTTTAGGAATTTCAATTTATTAG
ACACAAAATTGTCTTTGATTATAGCAACGACAACTTCTTGTTTGCCAATGACTGTATGGTTGTTGCACTCGTATTTTTCA
CAAATTCCTATAGATTATGAAGAAGCATCTTGGATGGATGGCGCAAACAGAATGCGAGGAATAAAAGATGTATTACTTCC
TTTATGTTTTCCAGGAATCATAACTGCAGGATTGTTTGCATTTATAGCTGCATGGGGAGATTTGATTTATGCGAAATCAT
TTATAACTTCTCCAGAACTTAGAACAATATCATTGGCACTTACAGATTTCCAAGATTTGTACAAAACTACTTGGGAAACT
CAAATGGCAGCAAGCGTTGTAGCTACACTTCCACCATTTATATTGTTCTTTATGATTCAAAAATATTTGATTAAATCAAT
GGTTTCACAAGGGGTGAAAGGTTAA

Upstream 100 bases:

>100_bases
GCTTTCAGTAGATTCAACATAGGTGCAAGTTCTGCGTTGACAATGATTGTAGTAGTTATCTTGTCGCTAATGACTTTTAT
TTATTCAAGGAGTATGTTAA

Downstream 100 bases:

>100_bases
TGATTAGATTTATACCTTCAACAGTCAGACAAATAGGAATCTCTAAGAATAATTGCGATGAGATAAATGAAAAATTTGCC
TTGAAAAACGAAGAGACTGC

Product: sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRNKKNVKSTIILTIIVILLLFPIVILVNSSLKTYNELITWPPKFFDSFHFENYTNVLSGDKSILKEFFNSLQISVITML
ICILIGSLAAYSVTRFDFKGKNAFMNIILVTQMFSSVIVVNAMYIIFRNFNLLDTKLSLIIATTTSCLPMTVWLLHSYFS
QIPIDYEEASWMDGANRMRGIKDVLLPLCFPGIITAGLFAFIAAWGDLIYAKSFITSPELRTISLALTDFQDLYKTTWET
QMAASVVATLPPFILFFMIQKYLIKSMVSQGVKG

Sequences:

>Translated_274_residues
MRNKKNVKSTIILTIIVILLLFPIVILVNSSLKTYNELITWPPKFFDSFHFENYTNVLSGDKSILKEFFNSLQISVITML
ICILIGSLAAYSVTRFDFKGKNAFMNIILVTQMFSSVIVVNAMYIIFRNFNLLDTKLSLIIATTTSCLPMTVWLLHSYFS
QIPIDYEEASWMDGANRMRGIKDVLLPLCFPGIITAGLFAFIAAWGDLIYAKSFITSPELRTISLALTDFQDLYKTTWET
QMAASVVATLPPFILFFMIQKYLIKSMVSQGVKG
>Mature_274_residues
MRNKKNVKSTIILTIIVILLLFPIVILVNSSLKTYNELITWPPKFFDSFHFENYTNVLSGDKSILKEFFNSLQISVITML
ICILIGSLAAYSVTRFDFKGKNAFMNIILVTQMFSSVIVVNAMYIIFRNFNLLDTKLSLIIATTTSCLPMTVWLLHSYFS
QIPIDYEEASWMDGANRMRGIKDVLLPLCFPGIITAGLFAFIAAWGDLIYAKSFITSPELRTISLALTDFQDLYKTTWET
QMAASVVATLPPFILFFMIQKYLIKSMVSQGVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=264, Percent_Identity=30.6818181818182, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1790464, Length=295, Percent_Identity=25.7627118644068, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787368, Length=173, Percent_Identity=24.2774566473988, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789860, Length=271, Percent_Identity=21.7712177121771, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31064; Mature: 31064

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]