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The map label for this gene is ygcJ [H]

Identifier: 169823573

GI number: 169823573

Start: 47922

End: 49016

Strand: Reverse

Name: ygcJ [H]

Synonym: FMG_P0059

Alternate gene names: 169823573

Gene position: 49016-47922 (Counterclockwise)

Preceding gene: 169823574

Following gene: 169823572

Centisome position: 25.91

GC content: 31.14

Gene sequence:

>1095_bases
ATGAAGAATAAATTATATTTAGACATACACGCACTACAAGTACTACCACCATCAAATGTGAATAGAGATGAATTTGGAAA
CCCAAAATCAGCACTATACGGGGGAGTGAATAGATCAAGAGTTAGTTCTCAATCATGGAAAAGAGCTATCAGAGAATATT
TTTATGAAAATAGCGAGATTCAGAACTTAGGAGTTAGAACATTGAAATTACCTGATTATATAGCTGATAAAATGCTAGAA
ATTGATAGCTCAATTCCTAGAGAAGAGGCTATTAAAAAGGCTGGAAAGGTATTAAAGTCAGCTGGAATTTCAACAAAACT
CAAAGATGTTGATGATGAAGGAGAAAAGACTTTAGTCCTAGAATCTTTGTTTTTTATCTCGGATAAACAAGCTTTAGAAT
TAGCACAAGCAGCAGTAAAAGGTGATGTTCCAAAACCCGATATTATAGACAGTATTAAAAACAATATGTCTATAGATATA
GCATTATTCGGTAGAATGGTTGCTTCTTCTAAAAACTTAAATGTAGAGGCAAGTTGTCAAGTAGCACATGCTATATCAAC
TCATGAGGTTAATTCTGAAGTAGACTATTTTACGGCAGTTGATGAATATACGAAAGATCCAGGAGCTGCAATGATTGGTA
ATTCTAATTTTAACGCCTCAACATTATACAGATATTCAAATATTGCAATTCACGACTTGTTTGAACAAATTCACGACAAA
GAAACATTAATTAATTCTATTAAGCTTTTTATAAAGGCTTTCTGTTTATCAATGCCATCAGGAAAGATAAATTCTTATGC
AAATCAAACTTTGCCTAGCTTTTTATCAATCGATATTCGTTCAGATAGACCAATGAACTTAGTTTCTGCTTTTGAAGAAC
CTGTAGTGTCTAATTCTGGATATACTAAAAAATCTATAGAAAAGCTTTCTGATGAACATAAAAAGCTTAATAAATTCTAT
GACAAGCCTTTATTAAGCTCTTTTATTTCTTTTGATGATATTGAGTGTTTAAATGAGTTTGGCAATGAAGCTGATAATTT
AAACAACTTAGCCGAAAATGTAGCTAATTTTTTAAAAGATAATTTAGGTGATTAA

Upstream 100 bases:

>100_bases
TTACACCAAATAAAAGAATTTTCAGCTAGAAAAGATTGTTTAGAAATGTACGCAAACCTAGTAAAATACATTGATTTTAA
AAGAAAAGAGGAAAAAGAAA

Downstream 100 bases:

>100_bases
TTGTGAGTGTTATTTTGTTAAAGTTTGCTAGTCCTCTTCAATCATGGGGAGGCTTAGCAAATTATGAGATAAGAAATACT
GAATATTATCCAACAAAAAG

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKNKLYLDIHALQVLPPSNVNRDEFGNPKSALYGGVNRSRVSSQSWKRAIREYFYENSEIQNLGVRTLKLPDYIADKMLE
IDSSIPREEAIKKAGKVLKSAGISTKLKDVDDEGEKTLVLESLFFISDKQALELAQAAVKGDVPKPDIIDSIKNNMSIDI
ALFGRMVASSKNLNVEASCQVAHAISTHEVNSEVDYFTAVDEYTKDPGAAMIGNSNFNASTLYRYSNIAIHDLFEQIHDK
ETLINSIKLFIKAFCLSMPSGKINSYANQTLPSFLSIDIRSDRPMNLVSAFEEPVVSNSGYTKKSIEKLSDEHKKLNKFY
DKPLLSSFISFDDIECLNEFGNEADNLNNLAENVANFLKDNLGD

Sequences:

>Translated_364_residues
MKNKLYLDIHALQVLPPSNVNRDEFGNPKSALYGGVNRSRVSSQSWKRAIREYFYENSEIQNLGVRTLKLPDYIADKMLE
IDSSIPREEAIKKAGKVLKSAGISTKLKDVDDEGEKTLVLESLFFISDKQALELAQAAVKGDVPKPDIIDSIKNNMSIDI
ALFGRMVASSKNLNVEASCQVAHAISTHEVNSEVDYFTAVDEYTKDPGAAMIGNSNFNASTLYRYSNIAIHDLFEQIHDK
ETLINSIKLFIKAFCLSMPSGKINSYANQTLPSFLSIDIRSDRPMNLVSAFEEPVVSNSGYTKKSIEKLSDEHKKLNKFY
DKPLLSSFISFDDIECLNEFGNEADNLNNLAENVANFLKDNLGD
>Mature_364_residues
MKNKLYLDIHALQVLPPSNVNRDEFGNPKSALYGGVNRSRVSSQSWKRAIREYFYENSEIQNLGVRTLKLPDYIADKMLE
IDSSIPREEAIKKAGKVLKSAGISTKLKDVDDEGEKTLVLESLFFISDKQALELAQAAVKGDVPKPDIIDSIKNNMSIDI
ALFGRMVASSKNLNVEASCQVAHAISTHEVNSEVDYFTAVDEYTKDPGAAMIGNSNFNASTLYRYSNIAIHDLFEQIHDK
ETLINSIKLFIKAFCLSMPSGKINSYANQTLPSFLSIDIRSDRPMNLVSAFEEPVVSNSGYTKKSIEKLSDEHKKLNKFY
DKPLLSSFISFDDIECLNEFGNEADNLNNLAENVANFLKDNLGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789116, Length=339, Percent_Identity=29.4985250737463, Blast_Score=126, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010148 [H]

Pfam domain/function: PF09344 Cas_CT1975 [H]

EC number: NA

Molecular weight: Translated: 40659; Mature: 40659

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKLYLDIHALQVLPPSNVNRDEFGNPKSALYGGVNRSRVSSQSWKRAIREYFYENSEI
CCCCEEEEEEEEEECCCCCCCHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCH
QNLGVRTLKLPDYIADKMLEIDSSIPREEAIKKAGKVLKSAGISTKLKDVDDEGEKTLVL
HHCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHH
ESLFFISDKQALELAQAAVKGDVPKPDIIDSIKNNMSIDIALFGRMVASSKNLNVEASCQ
HHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEHHHHHHHHHHCCCCCCEEEHHH
VAHAISTHEVNSEVDYFTAVDEYTKDPGAAMIGNSNFNASTLYRYSNIAIHDLFEQIHDK
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ETLINSIKLFIKAFCLSMPSGKINSYANQTLPSFLSIDIRSDRPMNLVSAFEEPVVSNSG
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHEEEEECCCCCHHHHHHHHHHHCCCCC
YTKKSIEKLSDEHKKLNKFYDKPLLSSFISFDDIECLNEFGNEADNLNNLAENVANFLKD
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
NLGD
CCCC
>Mature Secondary Structure
MKNKLYLDIHALQVLPPSNVNRDEFGNPKSALYGGVNRSRVSSQSWKRAIREYFYENSEI
CCCCEEEEEEEEEECCCCCCCHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCH
QNLGVRTLKLPDYIADKMLEIDSSIPREEAIKKAGKVLKSAGISTKLKDVDDEGEKTLVL
HHCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHH
ESLFFISDKQALELAQAAVKGDVPKPDIIDSIKNNMSIDIALFGRMVASSKNLNVEASCQ
HHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEHHHHHHHHHHCCCCCCEEEHHH
VAHAISTHEVNSEVDYFTAVDEYTKDPGAAMIGNSNFNASTLYRYSNIAIHDLFEQIHDK
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ETLINSIKLFIKAFCLSMPSGKINSYANQTLPSFLSIDIRSDRPMNLVSAFEEPVVSNSG
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHEEEEECCCCCHHHHHHHHHHHCCCCC
YTKKSIEKLSDEHKKLNKFYDKPLLSSFISFDDIECLNEFGNEADNLNNLAENVANFLKD
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
NLGD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]