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The map label for this gene is 169823574

Identifier: 169823574

GI number: 169823574

Start: 49006

End: 50565

Strand: Reverse

Name: 169823574

Synonym: FMG_P0060

Alternate gene names: NA

Gene position: 50565-49006 (Counterclockwise)

Preceding gene: 169823576

Following gene: 169823573

Centisome position: 26.73

GC content: 27.31

Gene sequence:

>1560_bases
TTGAGTGAATTTAATTTATTAGATGAAAAATGGATTCCTGTAATTGACAATGATTGTAATAACTTAAATGTTTCAATTCT
GGAGCTATTTAAAAATGCCTCTAAGTACATTAGTATAGCAGGTGATACTGAAGTTCAGACAATTTCAATAACAAGATTTT
TGTTATCTATTCTTCAAACGGTATTCTCAAGATTTGATGAGAATGGGGAAGAGTATGGATATTTTGGACTAAATGATATG
TTTAAGCAGAAAACTGAAATAGATCCAAATGTTATTGAAGATTATGTTAATGATTTGAATAAAGCGTGGATTAATTTATT
GGAAATGAAATCTTTCCCAAAGATTGTAGAAATTTATTTAAATAAATATCACGATAGATTTTATTTATATGATGACGAGT
ATCCGTTTTATCAAGTAAGTAGTAATATATGGGAAGATTTTAATGTTATATCGATGGGTAAGCAAAATGCAAAACCATCT
AATATCCCTTTTAAAAAGATAAACGGTAAATTTTATGAATCAAATTCTTTAAGAATGTTCAACGTTAACGATGAAAAGGC
AAAGAATAAAATGTCAGATTCAGAACTTGCTAGATGGATTATAACATATCAAAACTATTCTAATACGTCAGATAAGGCTG
TTTTTGACGGTGTAAGCAAAAAGTCATACGGTTGGCTATATAAGATTACTACAATGAGTTTAAGGGGCAGTAACGTGTTT
GAAACACTAATGCTAAATCTTGTTTTAGTACACCCGGTTAAAGAGTTTGTAGGAAATTCTCAAAAACCTTGTTGGGAAGA
ATCGTCAAATAAGATTATTACTAAGAATATTAAAGGTTATGTTCCAGATAATTTAGCAGAATTGTATAATACTTATTCAA
GAGCTATTAGAATATCAAACAATAGCTTAGATGTGTGTAAATTATCTTTAATAGAGCCTATTAAATTGGAAAGTATGGCT
ATTTTGAGATATAAGGAAAAAGAAGATATTTATAATACGATAAAGGTTAGAAATAGCTACAGTTTGTGGCAAATTTTATT
CTTGATCAGTAAGGGGCTGTACGAAACACCCGTTATTCTTGAAAACTTATTAAAGTATTCTGAAAATATTGATTTAAAAG
ATATTAAAATAGACATGGTAACATTGATAGATGATGGAAACGCATTATCATATGTTCCAAAAGAGGAAATTTTCAGTAGT
TTTAATGTAAATGTATTAGACCTTCTTAACAAGGATTCTGATTTATATAAAACTTTAGAATATTGTTATACTGTTGTTCA
AAATTACAATAATTTCTTATATAAAATTGCACAATTAAATAGATATGACGATAAATCTTCTAAAGGTTACATTGAGAAAA
AGTTAGAACCTCTATATTTCTATGTAGATAGAGAACTCTCAGCTGATATTGAATTAGAAGATTTTAGAAAAGATTTTAAA
ATGTTTGCATTACACCAAATAAAAGAATTTTCAGCTAGAAAAGATTGTTTAGAAATGTACGCAAACCTAGTAAAATACAT
TGATTTTAAAAGAAAAGAGGAAAAAGAAAATGAAGAATAA

Upstream 100 bases:

>100_bases
ATATAGGGATTAGAAATGTAATTATGGATATGAATAATAATATTTTTTTCATTAGTTCCTCCTAATTATGTTATACCCGA
ATTTTTGAAAGGAGTAGTAG

Downstream 100 bases:

>100_bases
ATTATATTTAGACATACACGCACTACAAGTACTACCACCATCAAATGTGAATAGAGATGAATTTGGAAACCCAAAATCAG
CACTATACGGGGGAGTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Cse1 Family Protein; CRISPR System CASCADE Complex Protein CasA; Cse1 Family CRISPR-Associated Protein; CRISPR-Associated Helicase

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MSEFNLLDEKWIPVIDNDCNNLNVSILELFKNASKYISIAGDTEVQTISITRFLLSILQTVFSRFDENGEEYGYFGLNDM
FKQKTEIDPNVIEDYVNDLNKAWINLLEMKSFPKIVEIYLNKYHDRFYLYDDEYPFYQVSSNIWEDFNVISMGKQNAKPS
NIPFKKINGKFYESNSLRMFNVNDEKAKNKMSDSELARWIITYQNYSNTSDKAVFDGVSKKSYGWLYKITTMSLRGSNVF
ETLMLNLVLVHPVKEFVGNSQKPCWEESSNKIITKNIKGYVPDNLAELYNTYSRAIRISNNSLDVCKLSLIEPIKLESMA
ILRYKEKEDIYNTIKVRNSYSLWQILFLISKGLYETPVILENLLKYSENIDLKDIKIDMVTLIDDGNALSYVPKEEIFSS
FNVNVLDLLNKDSDLYKTLEYCYTVVQNYNNFLYKIAQLNRYDDKSSKGYIEKKLEPLYFYVDRELSADIELEDFRKDFK
MFALHQIKEFSARKDCLEMYANLVKYIDFKRKEEKENEE

Sequences:

>Translated_519_residues
MSEFNLLDEKWIPVIDNDCNNLNVSILELFKNASKYISIAGDTEVQTISITRFLLSILQTVFSRFDENGEEYGYFGLNDM
FKQKTEIDPNVIEDYVNDLNKAWINLLEMKSFPKIVEIYLNKYHDRFYLYDDEYPFYQVSSNIWEDFNVISMGKQNAKPS
NIPFKKINGKFYESNSLRMFNVNDEKAKNKMSDSELARWIITYQNYSNTSDKAVFDGVSKKSYGWLYKITTMSLRGSNVF
ETLMLNLVLVHPVKEFVGNSQKPCWEESSNKIITKNIKGYVPDNLAELYNTYSRAIRISNNSLDVCKLSLIEPIKLESMA
ILRYKEKEDIYNTIKVRNSYSLWQILFLISKGLYETPVILENLLKYSENIDLKDIKIDMVTLIDDGNALSYVPKEEIFSS
FNVNVLDLLNKDSDLYKTLEYCYTVVQNYNNFLYKIAQLNRYDDKSSKGYIEKKLEPLYFYVDRELSADIELEDFRKDFK
MFALHQIKEFSARKDCLEMYANLVKYIDFKRKEEKENEE
>Mature_518_residues
SEFNLLDEKWIPVIDNDCNNLNVSILELFKNASKYISIAGDTEVQTISITRFLLSILQTVFSRFDENGEEYGYFGLNDMF
KQKTEIDPNVIEDYVNDLNKAWINLLEMKSFPKIVEIYLNKYHDRFYLYDDEYPFYQVSSNIWEDFNVISMGKQNAKPSN
IPFKKINGKFYESNSLRMFNVNDEKAKNKMSDSELARWIITYQNYSNTSDKAVFDGVSKKSYGWLYKITTMSLRGSNVFE
TLMLNLVLVHPVKEFVGNSQKPCWEESSNKIITKNIKGYVPDNLAELYNTYSRAIRISNNSLDVCKLSLIEPIKLESMAI
LRYKEKEDIYNTIKVRNSYSLWQILFLISKGLYETPVILENLLKYSENIDLKDIKIDMVTLIDDGNALSYVPKEEIFSSF
NVNVLDLLNKDSDLYKTLEYCYTVVQNYNNFLYKIAQLNRYDDKSSKGYIEKKLEPLYFYVDRELSADIELEDFRKDFKM
FALHQIKEFSARKDCLEMYANLVKYIDFKRKEEKENEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61168; Mature: 61037

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFNLLDEKWIPVIDNDCNNLNVSILELFKNASKYISIAGDTEVQTISITRFLLSILQT
CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHH
VFSRFDENGEEYGYFGLNDMFKQKTEIDPNVIEDYVNDLNKAWINLLEMKSFPKIVEIYL
HHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NKYHDRFYLYDDEYPFYQVSSNIWEDFNVISMGKQNAKPSNIPFKKINGKFYESNSLRMF
HHHCCEEEEECCCCCCEEECCHHHCCCCEEECCCCCCCCCCCCHHHCCCEEEECCCEEEE
NVNDEKAKNKMSDSELARWIITYQNYSNTSDKAVFDGVSKKSYGWLYKITTMSLRGSNVF
ECCHHHHHHCCCHHHHHEEHEEECCCCCCCCHHHHCCCCCCCCCEEEEEEEEEECCCHHH
ETLMLNLVLVHPVKEFVGNSQKPCWEESSNKIITKNIKGYVPDNLAELYNTYSRAIRISN
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHEEEECC
NSLDVCKLSLIEPIKLESMAILRYKEKEDIYNTIKVRNSYSLWQILFLISKGLYETPVIL
CCCCEEEHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHH
ENLLKYSENIDLKDIKIDMVTLIDDGNALSYVPKEEIFSSFNVNVLDLLNKDSDLYKTLE
HHHHHHHCCCCCEEEEEEEEEEEECCCCEECCCHHHHHHHCCCCHHHHHCCCHHHHHHHH
YCYTVVQNYNNFLYKIAQLNRYDDKSSKGYIEKKLEPLYFYVDRELSADIELEDFRKDFK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEEECCCCCCCCHHHHHHHHH
MFALHQIKEFSARKDCLEMYANLVKYIDFKRKEEKENEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SEFNLLDEKWIPVIDNDCNNLNVSILELFKNASKYISIAGDTEVQTISITRFLLSILQT
CCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHH
VFSRFDENGEEYGYFGLNDMFKQKTEIDPNVIEDYVNDLNKAWINLLEMKSFPKIVEIYL
HHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NKYHDRFYLYDDEYPFYQVSSNIWEDFNVISMGKQNAKPSNIPFKKINGKFYESNSLRMF
HHHCCEEEEECCCCCCEEECCHHHCCCCEEECCCCCCCCCCCCHHHCCCEEEECCCEEEE
NVNDEKAKNKMSDSELARWIITYQNYSNTSDKAVFDGVSKKSYGWLYKITTMSLRGSNVF
ECCHHHHHHCCCHHHHHEEHEEECCCCCCCCHHHHCCCCCCCCCEEEEEEEEEECCCHHH
ETLMLNLVLVHPVKEFVGNSQKPCWEESSNKIITKNIKGYVPDNLAELYNTYSRAIRISN
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHEEEECC
NSLDVCKLSLIEPIKLESMAILRYKEKEDIYNTIKVRNSYSLWQILFLISKGLYETPVIL
CCCCEEEHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHH
ENLLKYSENIDLKDIKIDMVTLIDDGNALSYVPKEEIFSSFNVNVLDLLNKDSDLYKTLE
HHHHHHHCCCCCEEEEEEEEEEEECCCCEECCCHHHHHHHCCCCHHHHHCCCHHHHHHHH
YCYTVVQNYNNFLYKIAQLNRYDDKSSKGYIEKKLEPLYFYVDRELSADIELEDFRKDFK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEEECCCCCCCCHHHHHHHHH
MFALHQIKEFSARKDCLEMYANLVKYIDFKRKEEKENEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA