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The map label for this gene is ygcI [C]

Identifier: 169823572

GI number: 169823572

Start: 47233

End: 47919

Strand: Reverse

Name: ygcI [C]

Synonym: FMG_P0058

Alternate gene names: 169823572

Gene position: 47919-47233 (Counterclockwise)

Preceding gene: 169823573

Following gene: 169823571

Centisome position: 25.33

GC content: 32.02

Gene sequence:

>687_bases
GTGAGTGTTATTTTGTTAAAGTTTGCTAGTCCTCTTCAATCATGGGGAGGCTTAGCAAATTATGAGATAAGAAATACTGA
ATATTATCCAACAAAAAGTGCTGTTATTGGGCTAGTAGCAGCGGCTTTTGGCTATAAAAAAACCGATACAGAAAGCATCA
AGAGGTTAAACTCTTTAAATTTCTCCGTTAGAATAGATCAAAAAGGTAGTTTGATTCGTGATTTTCAAATAGCTATGGAA
TACAACCCTAAATATATGCCTAATGACCCTAATTACTTTGTTAAGAGTAATTTAATACAAAAGTATTATATCCAGGATGC
TAAGTTTCTTATAGCATTATCGAGTGATGATGAAACGTTAATGGAAGATGTATACAACGCTTTAGAAAGCCCTGCATACC
AACTATTTCTAGGCAGAAAATCAAACCCGATAAATGCTGATTACTTAATAGGAAAATTTGACGGAAATGAGCTTGAGATA
ATCAAAGATTATGAATGGTTAGCCTCTAAATGGTATAAGAAAAGCATTAAAAAAGATAGTGTAGAGTTATCAATATTCAG
TGATTATATAGATACTGGTAGTAAAGAAAAGCTAATAAGACGTGATTTAACAGAGTCTTTTGAGAATACAAAACGTGATT
TTTCAAGTAGATTCGAATATAGATATGTAACAAAGGTGGGTGAGTAA

Upstream 100 bases:

>100_bases
ATATTGAGTGTTTAAATGAGTTTGGCAATGAAGCTGATAATTTAAACAACTTAGCCGAAAATGTAGCTAATTTTTTAAAA
GATAATTTAGGTGATTAATT

Downstream 100 bases:

>100_bases
ATGTATCTTTCAAGAGTAATGCTTAAAGATAATCAAAATTACAGAAATTATGTGTATACTAATTTACAATATTTTCATAA
ATGGGTTGAAGAATCCTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Family; CRISPR-Associated Cas5 Family Protein; CRISPR-Associated Cas5e Family Protein; Cas5 Family CRISPR-Associated Protein; Crispr-Associated Protein; CRISPR-Associated Protein Cas5e Family; Crispr-Associated Family Protein; CRISPR-Associated Protein Cas5e-Type; CRISPR-Associated Cas5 Family Ecoli Subtype Protein; CRISPR-Associated Protein CT; CRISPR-Associated Subtype

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSVILLKFASPLQSWGGLANYEIRNTEYYPTKSAVIGLVAAAFGYKKTDTESIKRLNSLNFSVRIDQKGSLIRDFQIAME
YNPKYMPNDPNYFVKSNLIQKYYIQDAKFLIALSSDDETLMEDVYNALESPAYQLFLGRKSNPINADYLIGKFDGNELEI
IKDYEWLASKWYKKSIKKDSVELSIFSDYIDTGSKEKLIRRDLTESFENTKRDFSSRFEYRYVTKVGE

Sequences:

>Translated_228_residues
MSVILLKFASPLQSWGGLANYEIRNTEYYPTKSAVIGLVAAAFGYKKTDTESIKRLNSLNFSVRIDQKGSLIRDFQIAME
YNPKYMPNDPNYFVKSNLIQKYYIQDAKFLIALSSDDETLMEDVYNALESPAYQLFLGRKSNPINADYLIGKFDGNELEI
IKDYEWLASKWYKKSIKKDSVELSIFSDYIDTGSKEKLIRRDLTESFENTKRDFSSRFEYRYVTKVGE
>Mature_227_residues
SVILLKFASPLQSWGGLANYEIRNTEYYPTKSAVIGLVAAAFGYKKTDTESIKRLNSLNFSVRIDQKGSLIRDFQIAMEY
NPKYMPNDPNYFVKSNLIQKYYIQDAKFLIALSSDDETLMEDVYNALESPAYQLFLGRKSNPINADYLIGKFDGNELEII
KDYEWLASKWYKKSIKKDSVELSIFSDYIDTGSKEKLIRRDLTESFENTKRDFSSRFEYRYVTKVGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082154, Length=239, Percent_Identity=26.7782426778243, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26488; Mature: 26357

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVILLKFASPLQSWGGLANYEIRNTEYYPTKSAVIGLVAAAFGYKKTDTESIKRLNSLN
CEEEEEEHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
FSVRIDQKGSLIRDFQIAMEYNPKYMPNDPNYFVKSNLIQKYYIQDAKFLIALSSDDETL
EEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHH
MEDVYNALESPAYQLFLGRKSNPINADYLIGKFDGNELEIIKDYEWLASKWYKKSIKKDS
HHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHCCCC
VELSIFSDYIDTGSKEKLIRRDLTESFENTKRDFSSRFEYRYVTKVGE
EEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
>Mature Secondary Structure 
SVILLKFASPLQSWGGLANYEIRNTEYYPTKSAVIGLVAAAFGYKKTDTESIKRLNSLN
EEEEEEHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
FSVRIDQKGSLIRDFQIAMEYNPKYMPNDPNYFVKSNLIQKYYIQDAKFLIALSSDDETL
EEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHH
MEDVYNALESPAYQLFLGRKSNPINADYLIGKFDGNELEIIKDYEWLASKWYKKSIKKDS
HHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHCCCC
VELSIFSDYIDTGSKEKLIRRDLTESFENTKRDFSSRFEYRYVTKVGE
EEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA