| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167625819
Identifier: 167625819
GI number: 167625819
Start: 4750137
End: 4750313
Strand: Reverse
Name: 167625819
Synonym: Shal_3914
Alternate gene names: NA
Gene position: 4750313-4750137 (Counterclockwise)
Preceding gene: 167625821
Following gene: 167625818
Centisome position: 90.88
GC content: 44.63
Gene sequence:
>177_bases ATGTTGAAAAAAATGAGACTGTTTTTGCTAGTAGGGCTTGGTAGCCTAGTACTTTTAGGCTGTGGACAAAAAAGCGCGTT ATTTAGAGCGCCTCCGCAAGAAGTTAATCAGCAGGCAACTGATAAGCCGGTGCCTGACGCAGAGCATGAGCAAAGCGAGC AAAGTAAAAAGGACTAA
Upstream 100 bases:
>100_bases GCGTTATAGGGTTGACGCATAGCGGGCTGTCTGCAAACATCAGGATTAACAATTTTTGCCGTATAGCAAGCCGTAGTGTT ATTGCTACAAGGGTCACCTG
Downstream 100 bases:
>100_bases AGACATTGGATCATTTTTTATATCAAGCAGATGAGCTTTATGCGGAGCAATGTCAAGTTGCCGAGCTCGCCAAGCAGCAT GGAACGCCGCTATATATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 58
Protein sequence:
>58_residues MLKKMRLFLLVGLGSLVLLGCGQKSALFRAPPQEVNQQATDKPVPDAEHEQSEQSKKD
Sequences:
>Translated_58_residues MLKKMRLFLLVGLGSLVLLGCGQKSALFRAPPQEVNQQATDKPVPDAEHEQSEQSKKD >Mature_58_residues MLKKMRLFLLVGLGSLVLLGCGQKSALFRAPPQEVNQQATDKPVPDAEHEQSEQSKKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6407; Mature: 6407
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKMRLFLLVGLGSLVLLGCGQKSALFRAPPQEVNQQATDKPVPDAEHEQSEQSKKD CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MLKKMRLFLLVGLGSLVLLGCGQKSALFRAPPQEVNQQATDKPVPDAEHEQSEQSKKD CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA