| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
Click here to switch to the map view.
The map label for this gene is cyaA [H]
Identifier: 167625821
GI number: 167625821
Start: 4751136
End: 4753559
Strand: Reverse
Name: cyaA [H]
Synonym: Shal_3916
Alternate gene names: 167625821
Gene position: 4753559-4751136 (Counterclockwise)
Preceding gene: 167625835
Following gene: 167625819
Centisome position: 90.94
GC content: 44.22
Gene sequence:
>2424_bases TTGCAGGACGAGTTTGATAAATTCGAGCGTGCAGCTCAACGGTTAGATGTCATCAGGTACGCTAGAGCGATTGCGCTGCT GTCGCCACTCAAGCGGCACTTACTTCGGCTTATTCCTATTTTTTTGCATTACCACGCCCCTAAACTGCCTGGTTATAACG GCCCTTTAACGCCGTCTGGTATTGTAGATTATCAGTTTTTGGCAGAAACCACGGAAGCCTGTGAAACCCTCGAAATTGAT CTATCGAATGCAAAAACTGCAGCTCGCCCCTTAATTGAGGGGATTTACAGCATGGGCAGTACTGCGAGCTTTGGTCAAAA TCCGCAGAGCGACATCGATGTATGGTTAATACATAGTGATTTATTGAGTAAGAATGAGTGTGAATTACTCGCTAGCAAAG CTGTATTACTGACCCAGTGGTTCGCAAAGTTTGATTTGGAAGTGAACTTCTACTTGGTGCACCCAGAGCAATTTATTAGA GAGCAGGGCGAACAGGCTGATTTATACAACTGCATGGGGCATGAGCACAGTGGTAGTGCTCAGCATTGGTTACTGCTCGA GGAGTTTTATCGTAGTCAATTTCGTTTGGCGGGTAGGCCTATAGCATGGTGGCCGAATGCTAAAAAGTCTCCAAAGTTAC TCACTTTAGGCGATGCTAATACTTTGCCAGCTAGTGAGTATTTTGGCGCTTCGCTTTGGCAGCTCTACAAGGGGGTTGAG AAGCCTCATAAAGCCTTGTTAAAAGTGCTTCTACTAGAAGCGTATGCCAGTGATTACCCCAATACTCAGTTAGTGAGTGA GCGGATTTGGCAACATACATTAAAAGGGGATTTCTCAGCGGCTAATGATGCTTATTATCTGCTGTATGAGTCGATAGAGT CCTATTTAAAGAAGCATGGTGATAATCGGCGTCTAGAGATCACCCGCCGTTGTTTTTACTTAAAGTGTGGCGTCAAATTG AGTCGGCATGATCAGGCGGTCGATTGGCGATACTTTAAGATGCAGAAATTAGTTGCCGATTGGAACTGGTCAGAAAGTTT ACTGAAAACTCTAGATCACTGTGAAAATTGGCACTGTGGCCAGTTGCAGTGGTTTAACGAACAGCTCAATGAACTGATGT TGGGCAGTTATCGGACCCTATTGCAGTTTGCTTCAACCCATAGATTAAGTGAGAGCTTACGGATCTCTGAGTTAGGTCTA TTAACCCGAAAGCTGCATACTTATTTTAGTGAAGATGCCCACCAGATCATGCGCCTTAATCCGCTGTGGAGTCGTTCGAT TCTAGAGCCCCATTTATCTGTCATTTATAGCGAACAAGATAAGTCTTATTATTTGTATCGTTGCTCACCTAACCCGAAAA ACTTCCTTGAATATAGTGCGGTGTTCCATTCAAAAAGTAAGGCTAAGTTGTTGGTATGGGCCAGCTTGAATGGTGTTGCT GATAGTAAAACCCATTGGCATGAAGTGAGACAAAGTAAGCGCAAATCGACTTACTTAACTCATGCGGGCAATCGACTCGA CGGGCTTATCGTACATCAATCGACGAAAGTATCTAAGATGGCACTCTATCAGCCTTGGCATTTTAGCAAGCTAGTATTTT TATTGAATTTCAATAGCGATCCTACTGAGAGTTGGCAAGGACAAGACATCATGGTCGACTATATGAACAGCAATGTGTTC TCGATTGGTCGACGTCATTTGAATATGGTGGACTCGATTGATGTGATTAGTCTTAACAGCTGGGGAGAGTGGCATTGTCA TCATTTTGAGGGCGAGAAAAGTATCTTGGATGCCCTATCGTTTGTAACGCCTGGTATGAAACGAGCCAGCGCTACCGTCT CGGTTGAGGTGATTAGTTGTTCAAGCAAGTTACGATCGCAAACTGAACGTACAGTGCAGAACCTGCTTTACAGAGCGGTA CGGCTTAGTCGTCAGGCACAAAGTTCAACAACGTTAGGTTATGCCTTGCAGGTAGGTCGGCTGCGCTATGGTTTGTTTTT TAATAATCGTGGCATGCATTACGAGAATTTAAGTGATGCTAAATCTTTCTATCAACAGTTGTCTCAGCGCAAATTACTTG AGCTTCCCAGACCAACCTTAGGCGATGAACCATTTGCTAAAGTGCCAGCAGTGATCCAAGACTATGCCGCTAAAGGCGCG ATTCAGTATTTCTTGCGTCAGAGGGAAGAGGGGTTAGACGTGTTTATTTTAGATGAGAAGAATGAGCTAAACCACTATGT GCAAGAGGGAACCGACGTGGATGCGTTAGTGAACAAGTTAAGCCATTATCACACATTTGAAGACCCTCAACTTGAAAGAG ATAATTTCAATCTGCCACAGTTTTTTAAATTAGATCGAGTCAAAGGCGAGCTGGTTGCGCTGCCTTTTGGGGTGACGCAG GAGTCTTCAGAAGTCGACTTTTAA
Upstream 100 bases:
>100_bases TAAATCGCCTAGAAGCGTGATGTTGATCACATTTGCTTGCTGGTTATGTGTTTGCCATATACATTGGGGATAGTTATTTA TTTTCAGTGGGCCAAATGAT
Downstream 100 bases:
>100_bases TGGTGGAACCTGAAGCTGATGCGGTTGAAAATAAAAGAATGAGAAGCAGGGCTTCTCATTCTTTTATTATATAGAACAAA ACTAGATATCCAGTTTTAAA
Product: adenylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase; Adenylyl cyclase [H]
Number of amino acids: Translated: 807; Mature: 807
Protein sequence:
>807_residues MQDEFDKFERAAQRLDVIRYARAIALLSPLKRHLLRLIPIFLHYHAPKLPGYNGPLTPSGIVDYQFLAETTEACETLEID LSNAKTAARPLIEGIYSMGSTASFGQNPQSDIDVWLIHSDLLSKNECELLASKAVLLTQWFAKFDLEVNFYLVHPEQFIR EQGEQADLYNCMGHEHSGSAQHWLLLEEFYRSQFRLAGRPIAWWPNAKKSPKLLTLGDANTLPASEYFGASLWQLYKGVE KPHKALLKVLLLEAYASDYPNTQLVSERIWQHTLKGDFSAANDAYYLLYESIESYLKKHGDNRRLEITRRCFYLKCGVKL SRHDQAVDWRYFKMQKLVADWNWSESLLKTLDHCENWHCGQLQWFNEQLNELMLGSYRTLLQFASTHRLSESLRISELGL LTRKLHTYFSEDAHQIMRLNPLWSRSILEPHLSVIYSEQDKSYYLYRCSPNPKNFLEYSAVFHSKSKAKLLVWASLNGVA DSKTHWHEVRQSKRKSTYLTHAGNRLDGLIVHQSTKVSKMALYQPWHFSKLVFLLNFNSDPTESWQGQDIMVDYMNSNVF SIGRRHLNMVDSIDVISLNSWGEWHCHHFEGEKSILDALSFVTPGMKRASATVSVEVISCSSKLRSQTERTVQNLLYRAV RLSRQAQSSTTLGYALQVGRLRYGLFFNNRGMHYENLSDAKSFYQQLSQRKLLELPRPTLGDEPFAKVPAVIQDYAAKGA IQYFLRQREEGLDVFILDEKNELNHYVQEGTDVDALVNKLSHYHTFEDPQLERDNFNLPQFFKLDRVKGELVALPFGVTQ ESSEVDF
Sequences:
>Translated_807_residues MQDEFDKFERAAQRLDVIRYARAIALLSPLKRHLLRLIPIFLHYHAPKLPGYNGPLTPSGIVDYQFLAETTEACETLEID LSNAKTAARPLIEGIYSMGSTASFGQNPQSDIDVWLIHSDLLSKNECELLASKAVLLTQWFAKFDLEVNFYLVHPEQFIR EQGEQADLYNCMGHEHSGSAQHWLLLEEFYRSQFRLAGRPIAWWPNAKKSPKLLTLGDANTLPASEYFGASLWQLYKGVE KPHKALLKVLLLEAYASDYPNTQLVSERIWQHTLKGDFSAANDAYYLLYESIESYLKKHGDNRRLEITRRCFYLKCGVKL SRHDQAVDWRYFKMQKLVADWNWSESLLKTLDHCENWHCGQLQWFNEQLNELMLGSYRTLLQFASTHRLSESLRISELGL LTRKLHTYFSEDAHQIMRLNPLWSRSILEPHLSVIYSEQDKSYYLYRCSPNPKNFLEYSAVFHSKSKAKLLVWASLNGVA DSKTHWHEVRQSKRKSTYLTHAGNRLDGLIVHQSTKVSKMALYQPWHFSKLVFLLNFNSDPTESWQGQDIMVDYMNSNVF SIGRRHLNMVDSIDVISLNSWGEWHCHHFEGEKSILDALSFVTPGMKRASATVSVEVISCSSKLRSQTERTVQNLLYRAV RLSRQAQSSTTLGYALQVGRLRYGLFFNNRGMHYENLSDAKSFYQQLSQRKLLELPRPTLGDEPFAKVPAVIQDYAAKGA IQYFLRQREEGLDVFILDEKNELNHYVQEGTDVDALVNKLSHYHTFEDPQLERDNFNLPQFFKLDRVKGELVALPFGVTQ ESSEVDF >Mature_807_residues MQDEFDKFERAAQRLDVIRYARAIALLSPLKRHLLRLIPIFLHYHAPKLPGYNGPLTPSGIVDYQFLAETTEACETLEID LSNAKTAARPLIEGIYSMGSTASFGQNPQSDIDVWLIHSDLLSKNECELLASKAVLLTQWFAKFDLEVNFYLVHPEQFIR EQGEQADLYNCMGHEHSGSAQHWLLLEEFYRSQFRLAGRPIAWWPNAKKSPKLLTLGDANTLPASEYFGASLWQLYKGVE KPHKALLKVLLLEAYASDYPNTQLVSERIWQHTLKGDFSAANDAYYLLYESIESYLKKHGDNRRLEITRRCFYLKCGVKL SRHDQAVDWRYFKMQKLVADWNWSESLLKTLDHCENWHCGQLQWFNEQLNELMLGSYRTLLQFASTHRLSESLRISELGL LTRKLHTYFSEDAHQIMRLNPLWSRSILEPHLSVIYSEQDKSYYLYRCSPNPKNFLEYSAVFHSKSKAKLLVWASLNGVA DSKTHWHEVRQSKRKSTYLTHAGNRLDGLIVHQSTKVSKMALYQPWHFSKLVFLLNFNSDPTESWQGQDIMVDYMNSNVF SIGRRHLNMVDSIDVISLNSWGEWHCHHFEGEKSILDALSFVTPGMKRASATVSVEVISCSSKLRSQTERTVQNLLYRAV RLSRQAQSSTTLGYALQVGRLRYGLFFNNRGMHYENLSDAKSFYQQLSQRKLLELPRPTLGDEPFAKVPAVIQDYAAKGA IQYFLRQREEGLDVFILDEKNELNHYVQEGTDVDALVNKLSHYHTFEDPQLERDNFNLPQFFKLDRVKGELVALPFGVTQ ESSEVDF
Specific function: Unknown
COG id: COG3072
COG function: function code F; Adenylate cyclase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylyl cyclase class-1 family [H]
Homologues:
Organism=Escherichia coli, GI1790238, Length=829, Percent_Identity=33.4137515078408, Blast_Score=429, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000274 [H]
Pfam domain/function: PF01295 Adenylate_cycl [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 93392; Mature: 93392
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS01092 ADENYLATE_CYCLASE_1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDEFDKFERAAQRLDVIRYARAIALLSPLKRHLLRLIPIFLHYHAPKLPGYNGPLTPSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC IVDYQFLAETTEACETLEIDLSNAKTAARPLIEGIYSMGSTASFGQNPQSDIDVWLIHSD CCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHH LLSKNECELLASKAVLLTQWFAKFDLEVNFYLVHPEQFIREQGEQADLYNCMGHEHSGSA HCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECHHHHHHCCCCCCHHHHHCCCCCCCCC QHWLLLEEFYRSQFRLAGRPIAWWPNAKKSPKLLTLGDANTLPASEYFGASLWQLYKGVE HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHC KPHKALLKVLLLEAYASDYPNTQLVSERIWQHTLKGDFSAANDAYYLLYESIESYLKKHG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC DNRRLEITRRCFYLKCGVKLSRHDQAVDWRYFKMQKLVADWNWSESLLKTLDHCENWHCG CCCEEEEEHEEEEEEECCEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC QLQWFNEQLNELMLGSYRTLLQFASTHRLSESLRISELGLLTRKLHTYFSEDAHQIMRLN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLWSRSILEPHLSVIYSEQDKSYYLYRCSPNPKNFLEYSAVFHSKSKAKLLVWASLNGVA CHHHHHHHHHHHHEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCC DSKTHWHEVRQSKRKSTYLTHAGNRLDGLIVHQSTKVSKMALYQPWHFSKLVFLLNFNSD CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHEECCCCCEEEEEEEECCCC PTESWQGQDIMVDYMNSNVFSIGRRHLNMVDSIDVISLNSWGEWHCHHFEGEKSILDALS CCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCHHHHHHHHH FVTPGMKRASATVSVEVISCSSKLRSQTERTVQNLLYRAVRLSRQAQSSTTLGYALQVGR HHCCCCHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC LRYGLFFNNRGMHYENLSDAKSFYQQLSQRKLLELPRPTLGDEPFAKVPAVIQDYAAKGA EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH IQYFLRQREEGLDVFILDEKNELNHYVQEGTDVDALVNKLSHYHTFEDPQLERDNFNLPQ HHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCH FFKLDRVKGELVALPFGVTQESSEVDF HHHHHCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MQDEFDKFERAAQRLDVIRYARAIALLSPLKRHLLRLIPIFLHYHAPKLPGYNGPLTPSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC IVDYQFLAETTEACETLEIDLSNAKTAARPLIEGIYSMGSTASFGQNPQSDIDVWLIHSD CCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHH LLSKNECELLASKAVLLTQWFAKFDLEVNFYLVHPEQFIREQGEQADLYNCMGHEHSGSA HCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECHHHHHHCCCCCCHHHHHCCCCCCCCC QHWLLLEEFYRSQFRLAGRPIAWWPNAKKSPKLLTLGDANTLPASEYFGASLWQLYKGVE HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHC KPHKALLKVLLLEAYASDYPNTQLVSERIWQHTLKGDFSAANDAYYLLYESIESYLKKHG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC DNRRLEITRRCFYLKCGVKLSRHDQAVDWRYFKMQKLVADWNWSESLLKTLDHCENWHCG CCCEEEEEHEEEEEEECCEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC QLQWFNEQLNELMLGSYRTLLQFASTHRLSESLRISELGLLTRKLHTYFSEDAHQIMRLN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLWSRSILEPHLSVIYSEQDKSYYLYRCSPNPKNFLEYSAVFHSKSKAKLLVWASLNGVA CHHHHHHHHHHHHEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCC DSKTHWHEVRQSKRKSTYLTHAGNRLDGLIVHQSTKVSKMALYQPWHFSKLVFLLNFNSD CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHEECCCCCEEEEEEEECCCC PTESWQGQDIMVDYMNSNVFSIGRRHLNMVDSIDVISLNSWGEWHCHHFEGEKSILDALS CCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCHHHHHHHHH FVTPGMKRASATVSVEVISCSSKLRSQTERTVQNLLYRAVRLSRQAQSSTTLGYALQVGR HHCCCCHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC LRYGLFFNNRGMHYENLSDAKSFYQQLSQRKLLELPRPTLGDEPFAKVPAVIQDYAAKGA EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH IQYFLRQREEGLDVFILDEKNELNHYVQEGTDVDALVNKLSHYHTFEDPQLERDNFNLPQ HHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCH FFKLDRVKGELVALPFGVTQESSEVDF HHHHHCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8874804 [H]