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The map label for this gene is yrbD [C]

Identifier: 167625601

GI number: 167625601

Start: 4497073

End: 4497543

Strand: Reverse

Name: yrbD [C]

Synonym: Shal_3696

Alternate gene names: 167625601

Gene position: 4497543-4497073 (Counterclockwise)

Preceding gene: 167625602

Following gene: 167625600

Centisome position: 86.05

GC content: 43.52

Gene sequence:

>471_bases
ATGTTGACAAGGAAAATTGAGATTCTAGTCGGTCTATTTTTATTGTCCGGATTGACAGCCTTTCTAGTATTAGTATTTAA
CGTTGCCAATGTTGAGGTTAAATCCGGCGATAGCAGTTATACGCTGCATGCCAAGTTTAATAATATTGGTGGCCTCAAAG
TGCGTTCTCCTGTCAAGGTCGGGGGCGTCGTGGTTGGTCGCGTCAGTGCAATCACCCTAGATCCTGAAAAGTTGGTTCCT
GTTGTAACAATCGCTATGGATAAGCGTTATCAGCATTTTCCTGAGACCAGCACCCTATCAATTTTAACTTCAGGTTTGTT
AGGCGAGCAGTTTTTGGGGTTAACCCCTGGTTTTATGGATGACGATATTGAGCTGTTAGCCGATGGTGATCGTATTGAAG
ATACCCATTCTGCCTTAGTGCTGGAAGAGTTGATTGGCCAGTTCCTTTATAGCATGGGCAAAAAGGATTAG

Upstream 100 bases:

>100_bases
CTGACAGCGATAATGTTTGGTCAGTAGTTGTATGATGATTGAGAGAGTTCCTAGTTGTTAATTATTGTTTAGATTTATTC
AATAGAGTGGTAAATGAGTT

Downstream 100 bases:

>100_bases
CCTTTTAGAATAAGTAGTTGGAGTATTTTAAGATGTTTAAAGGTTTTTATCGCAGCGTAATGTTAGCCATGATAGCACTG
CTTAGTGTTAATTTGAGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MLTRKIEILVGLFLLSGLTAFLVLVFNVANVEVKSGDSSYTLHAKFNNIGGLKVRSPVKVGGVVVGRVSAITLDPEKLVP
VVTIAMDKRYQHFPETSTLSILTSGLLGEQFLGLTPGFMDDDIELLADGDRIEDTHSALVLEELIGQFLYSMGKKD

Sequences:

>Translated_156_residues
MLTRKIEILVGLFLLSGLTAFLVLVFNVANVEVKSGDSSYTLHAKFNNIGGLKVRSPVKVGGVVVGRVSAITLDPEKLVP
VVTIAMDKRYQHFPETSTLSILTSGLLGEQFLGLTPGFMDDDIELLADGDRIEDTHSALVLEELIGQFLYSMGKKD
>Mature_156_residues
MLTRKIEILVGLFLLSGLTAFLVLVFNVANVEVKSGDSSYTLHAKFNNIGGLKVRSPVKVGGVVVGRVSAITLDPEKLVP
VVTIAMDKRYQHFPETSTLSILTSGLLGEQFLGLTPGFMDDDIELLADGDRIEDTHSALVLEELIGQFLYSMGKKD

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=152, Percent_Identity=57.8947368421053, Blast_Score=164, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 16937; Mature: 16937

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTRKIEILVGLFLLSGLTAFLVLVFNVANVEVKSGDSSYTLHAKFNNIGGLKVRSPVKV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEECCCCCEEECCCCCC
GGVVVGRVSAITLDPEKLVPVVTIAMDKRYQHFPETSTLSILTSGLLGEQFLGLTPGFMD
CCEEEEEEEEEEECHHHHCEEEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
DDIELLADGDRIEDTHSALVLEELIGQFLYSMGKKD
CCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLTRKIEILVGLFLLSGLTAFLVLVFNVANVEVKSGDSSYTLHAKFNNIGGLKVRSPVKV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEECCCCCEEECCCCCC
GGVVVGRVSAITLDPEKLVPVVTIAMDKRYQHFPETSTLSILTSGLLGEQFLGLTPGFMD
CCEEEEEEEEEEECHHHHCEEEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
DDIELLADGDRIEDTHSALVLEELIGQFLYSMGKKD
CCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]