| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is mlaC [H]
Identifier: 167625600
GI number: 167625600
Start: 4496369
End: 4497040
Strand: Reverse
Name: mlaC [H]
Synonym: Shal_3695
Alternate gene names: 167625600
Gene position: 4497040-4496369 (Counterclockwise)
Preceding gene: 167625601
Following gene: 167625599
Centisome position: 86.04
GC content: 42.41
Gene sequence:
>672_bases ATGTTTAAAGGTTTTTATCGCAGCGTAATGTTAGCCATGATAGCACTGCTTAGTGTTAATTTGAGTGTTAGTGCTCATGC AGAGGCAAGTATTGATATCGACCAGAGTAACCCTTTTACTATGGTTGAAGAGGTTGCTAACAAGACCTTTGCCCGCTTTC ATCAAGATGAGAAGCTGATTGCAACGGATCCTGATCATTTAAAGGTGATCGTGACCGAAGAGTTGATGCCTTATGTTGAT TATAAGTATGCCTCTTATAAGGTATTAGGTCAGTATCTACGTGATACCACTAAAGACCAGCGCGAGCGCTTTGTTGAAGC ATTTAAAGGATATCTGATTTCGACTTATGCCCAAGCATTTACTGAGTATACTGACCAAACAGTAGAATATGGCAGAGCCG AAGACTTTGCCGGTGAGAAGTTTGTCAGCGTCAATATTCAGGTTGTCGAGCAGGGTCGCCCTGCGATTAAGTTACAGTTC AAGGCGCGTCGCTTAAAAGATGGCACTTGGAAAGCATTTGACTTAATTGCCGAAGGCGTTAGCTTGTTATCATCGAAGCA ATCGGAGATCACCAACCTTGTGCGTCAGCAAGGGATCGAATCAGTGATTAACTTGCTGAAAGAGAAGACAAATCAGCATA TTGATTTGGACGCTAACGAGAAAAAAAGCTAG
Upstream 100 bases:
>100_bases CCCATTCTGCCTTAGTGCTGGAAGAGTTGATTGGCCAGTTCCTTTATAGCATGGGCAAAAAGGATTAGCCTTTTAGAATA AGTAGTTGGAGTATTTTAAG
Downstream 100 bases:
>100_bases TGGCCACATTTAAACAGCAAGGGGATAATTGCAGCGTATCGGGTCGTTTAGATCAGGATGCGGTGATCCGGCTGTGGAGT GGTCGAAGCAATATTTTGGA
Product: toluene tolerance family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MFKGFYRSVMLAMIALLSVNLSVSAHAEASIDIDQSNPFTMVEEVANKTFARFHQDEKLIATDPDHLKVIVTEELMPYVD YKYASYKVLGQYLRDTTKDQRERFVEAFKGYLISTYAQAFTEYTDQTVEYGRAEDFAGEKFVSVNIQVVEQGRPAIKLQF KARRLKDGTWKAFDLIAEGVSLLSSKQSEITNLVRQQGIESVINLLKEKTNQHIDLDANEKKS
Sequences:
>Translated_223_residues MFKGFYRSVMLAMIALLSVNLSVSAHAEASIDIDQSNPFTMVEEVANKTFARFHQDEKLIATDPDHLKVIVTEELMPYVD YKYASYKVLGQYLRDTTKDQRERFVEAFKGYLISTYAQAFTEYTDQTVEYGRAEDFAGEKFVSVNIQVVEQGRPAIKLQF KARRLKDGTWKAFDLIAEGVSLLSSKQSEITNLVRQQGIESVINLLKEKTNQHIDLDANEKKS >Mature_223_residues MFKGFYRSVMLAMIALLSVNLSVSAHAEASIDIDQSNPFTMVEEVANKTFARFHQDEKLIATDPDHLKVIVTEELMPYVD YKYASYKVLGQYLRDTTKDQRERFVEAFKGYLISTYAQAFTEYTDQTVEYGRAEDFAGEKFVSVNIQVVEQGRPAIKLQF KARRLKDGTWKAFDLIAEGVSLLSSKQSEITNLVRQQGIESVINLLKEKTNQHIDLDANEKKS
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. May transfer phospholipid across the peripl
COG id: COG2854
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaC/ttg2D family [H]
Homologues:
Organism=Escherichia coli, GI1789583, Length=209, Percent_Identity=38.755980861244, Blast_Score=157, Evalue=5e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023094 - InterPro: IPR008869 [H]
Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]
EC number: NA
Molecular weight: Translated: 25468; Mature: 25468
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKGFYRSVMLAMIALLSVNLSVSAHAEASIDIDQSNPFTMVEEVANKTFARFHQDEKLI CCHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEE ATDPDHLKVIVTEELMPYVDYKYASYKVLGQYLRDTTKDQRERFVEAFKGYLISTYAQAF ECCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH TEYTDQTVEYGRAEDFAGEKFVSVNIQVVEQGRPAIKLQFKARRLKDGTWKAFDLIAEGV HHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEHHHCCCCCHHHHHHHHHHH SLLSSKQSEITNLVRQQGIESVINLLKEKTNQHIDLDANEKKS HHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCC >Mature Secondary Structure MFKGFYRSVMLAMIALLSVNLSVSAHAEASIDIDQSNPFTMVEEVANKTFARFHQDEKLI CCHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEE ATDPDHLKVIVTEELMPYVDYKYASYKVLGQYLRDTTKDQRERFVEAFKGYLISTYAQAF ECCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH TEYTDQTVEYGRAEDFAGEKFVSVNIQVVEQGRPAIKLQFKARRLKDGTWKAFDLIAEGV HHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEHHHCCCCCHHHHHHHHHHH SLLSSKQSEITNLVRQQGIESVINLLKEKTNQHIDLDANEKKS HHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]