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The map label for this gene is 167625417

Identifier: 167625417

GI number: 167625417

Start: 4282043

End: 4283425

Strand: Reverse

Name: 167625417

Synonym: Shal_3509

Alternate gene names: NA

Gene position: 4283425-4282043 (Counterclockwise)

Preceding gene: 167625418

Following gene: 167625416

Centisome position: 81.95

GC content: 47.0

Gene sequence:

>1383_bases
ATGTCTGAGCCGACAGCCTTAAGTCTTATCCCACCTGTGGTGGTATTGGTGTTAGCCATTGTGCTACGCCGCCCAATCCT
CTCTTTGATTATCGGTGCATTAGTCGGTCTGGCCATGTATGAGCCCGCTAATATATTGACTAATTTTGCAGATACCTCTT
TGTCCGTGATGGCCGACGAAACTATCGGTTGGTTAATTTTAGTTTGTGGTGGCTTCGGTGCCTTGATTGCTCTGCTGGTT
CGCACTGGTGGTTCAATGGCGTTTGGTCGTCTAGCATTGAAGTTTGCTAACGGGCAAAAATCATCGCTGTTTATGACCTT
TATTCTAGGCGTTGTTATTTTTATCGATGACTACCTAAATGCCTTGACGGTCGGCTCCACCATGAAGCGCGTCACAGATA
AATTTAAGGTATCTCGTGAGATGCTAGCTTATGTGGTGGACTCCACGGCCGCGCCCATATGTGTGTTAGTGCCTCTTTCG
ACTTGGGCGGTATTTTTTGGTGGTTTGTTAGTTGATAACGGCATCGCAGGCGAGGGTCAAGGAATAGCCGTTTATATGCA
GGCGATCCCTTACATGCTTTACGCGTGGTTAGCCGTGGCTATGGTATTGCTAGTGATCTTAGGTATCGTGCCGGCTTTTG
GTCCGATGAAGAAAGCGCAAATAGCCGCAGCTCAAGGTGAACCAGCGATTAAGCAGATGGACTTAGATGAAGTGCAAACC
TCTGATGAATATGCACTAAAAGCCATTGAAGATGAATTTAAGCAAGCCGATGATGGTGGAAAACTGCATAATTTCTTCGT
GCCAATAATATTATTGGTGGGTTTTACCGTCTATTTCGATATCGATGTACTTAAAGGCTTGATTGCAACTCTTGCGGTGA
CATTGCCGTATTACGGGCTGCAGAAGCTGATGCCATTGTCAGAGATGATGGAGCAGATGATCGATGGCTTTAAGAGCATG
CTACCAGCCATTGGTACGGTTATCGCGGCATTCATCTTTAAAGATGTGTGCGATAAATTAATGCTGCCACAGTATGTTAT
CGACAGCCTCAGTCCGTTTATGACGCCGCAATTGCTGCCTGCTGTGGTGTTTTTAAGTATGTCTATCTTGGCGTTTGCAA
CAGGCTCAAGCTGGGGGATTTTTGCGGTATCGATTCCAATTGTGATGCCACTGGCGCAAGCGGTCGATGCCAATATTCCA
CTGGTGATTGGTGCATTGTTATCGGCATCATCTTTTGGTAGTCAGGCGTGTTTCTACTCCGACTCCACAGTGCTAGCAGC
ACAAGGCTCTGGCTGTAACTTAGTCAGCCATGCCGTCACTCAGCTGCCTTATGCGTTGATTGCTGCGGGTATGACCTTTA
TCGGCTTTTTGTGGCTGGCGTAA

Upstream 100 bases:

>100_bases
AGGTCCCTCAAAGGTAAAGCAGCAATTAGACTCGGCAAATAGTTGCCTGAGTTTGGTGATTAATTGCCATTTTGGCACTT
TATTATAAGGACCTTAGCGC

Downstream 100 bases:

>100_bases
GTTGTTAGCTTAAATAGTCACAGACGTAATCGCTTATAAAGCGCCTGTCATCTGAAGGGGTTGCACATTATGTGCAGCCC
CTTTTTTATTTTGCCTCTGT

Product: Na+/H+ antiporter NhaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MSEPTALSLIPPVVVLVLAIVLRRPILSLIIGALVGLAMYEPANILTNFADTSLSVMADETIGWLILVCGGFGALIALLV
RTGGSMAFGRLALKFANGQKSSLFMTFILGVVIFIDDYLNALTVGSTMKRVTDKFKVSREMLAYVVDSTAAPICVLVPLS
TWAVFFGGLLVDNGIAGEGQGIAVYMQAIPYMLYAWLAVAMVLLVILGIVPAFGPMKKAQIAAAQGEPAIKQMDLDEVQT
SDEYALKAIEDEFKQADDGGKLHNFFVPIILLVGFTVYFDIDVLKGLIATLAVTLPYYGLQKLMPLSEMMEQMIDGFKSM
LPAIGTVIAAFIFKDVCDKLMLPQYVIDSLSPFMTPQLLPAVVFLSMSILAFATGSSWGIFAVSIPIVMPLAQAVDANIP
LVIGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSHAVTQLPYALIAAGMTFIGFLWLA

Sequences:

>Translated_460_residues
MSEPTALSLIPPVVVLVLAIVLRRPILSLIIGALVGLAMYEPANILTNFADTSLSVMADETIGWLILVCGGFGALIALLV
RTGGSMAFGRLALKFANGQKSSLFMTFILGVVIFIDDYLNALTVGSTMKRVTDKFKVSREMLAYVVDSTAAPICVLVPLS
TWAVFFGGLLVDNGIAGEGQGIAVYMQAIPYMLYAWLAVAMVLLVILGIVPAFGPMKKAQIAAAQGEPAIKQMDLDEVQT
SDEYALKAIEDEFKQADDGGKLHNFFVPIILLVGFTVYFDIDVLKGLIATLAVTLPYYGLQKLMPLSEMMEQMIDGFKSM
LPAIGTVIAAFIFKDVCDKLMLPQYVIDSLSPFMTPQLLPAVVFLSMSILAFATGSSWGIFAVSIPIVMPLAQAVDANIP
LVIGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSHAVTQLPYALIAAGMTFIGFLWLA
>Mature_459_residues
SEPTALSLIPPVVVLVLAIVLRRPILSLIIGALVGLAMYEPANILTNFADTSLSVMADETIGWLILVCGGFGALIALLVR
TGGSMAFGRLALKFANGQKSSLFMTFILGVVIFIDDYLNALTVGSTMKRVTDKFKVSREMLAYVVDSTAAPICVLVPLST
WAVFFGGLLVDNGIAGEGQGIAVYMQAIPYMLYAWLAVAMVLLVILGIVPAFGPMKKAQIAAAQGEPAIKQMDLDEVQTS
DEYALKAIEDEFKQADDGGKLHNFFVPIILLVGFTVYFDIDVLKGLIATLAVTLPYYGLQKLMPLSEMMEQMIDGFKSML
PAIGTVIAAFIFKDVCDKLMLPQYVIDSLSPFMTPQLLPAVVFLSMSILAFATGSSWGIFAVSIPIVMPLAQAVDANIPL
VIGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSHAVTQLPYALIAAGMTFIGFLWLA

Specific function: Unknown

COG id: COG1757

COG function: function code C; Na+/H+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 49078; Mature: 48947

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPTALSLIPPVVVLVLAIVLRRPILSLIIGALVGLAMYEPANILTNFADTSLSVMADE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH
TIGWLILVCGGFGALIALLVRTGGSMAFGRLALKFANGQKSSLFMTFILGVVIFIDDYLN
HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
ALTVGSTMKRVTDKFKVSREMLAYVVDSTAAPICVLVPLSTWAVFFGGLLVDNGIAGEGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCC
GIAVYMQAIPYMLYAWLAVAMVLLVILGIVPAFGPMKKAQIAAAQGEPAIKQMDLDEVQT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHCCHHHHHC
SDEYALKAIEDEFKQADDGGKLHNFFVPIILLVGFTVYFDIDVLKGLIATLAVTLPYYGL
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKLMPLSEMMEQMIDGFKSMLPAIGTVIAAFIFKDVCDKLMLPQYVIDSLSPFMTPQLLP
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHCCHHHHH
AVVFLSMSILAFATGSSWGIFAVSIPIVMPLAQAVDANIPLVIGALLSASSFGSQACFYS
HHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEC
DSTVLAAQGSGCNLVSHAVTQLPYALIAAGMTFIGFLWLA
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEPTALSLIPPVVVLVLAIVLRRPILSLIIGALVGLAMYEPANILTNFADTSLSVMADE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH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CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]