Click here to switch to the map view.

The map label for this gene is 167625259

Identifier: 167625259

GI number: 167625259

Start: 4088948

End: 4089610

Strand: Reverse

Name: 167625259

Synonym: Shal_3348

Alternate gene names: NA

Gene position: 4089610-4088948 (Counterclockwise)

Preceding gene: 167625260

Following gene: 167625258

Centisome position: 78.24

GC content: 43.44

Gene sequence:

>663_bases
ATGAGACTGATCTTAACAATGAGGCTGATATTAACAATGAGACTTGGCTTAATAAGTTTATTCGGTGCCGCCTTGTTACT
TACAGGCTGCAGTTCTGCTTCAAGCAGCAATAGTTATTACTTGTTAAATAGCTACTCGGCAGCAGGGAATGCATCACAAG
GGCAGATTGCATTAAATCAGGGCGTTGAGCCTAGTGAAAAAACCAATGTTGGGCTCACTGTGCAATTGGCGGAATATTTA
AACTCTCCCTATCTCGTGATGCAAATTAATCAGCACAAACTGAGCTATGCCAGTTTTCATATGTGGGCCGAACCATTAGC
CGATGAGACCTTAAAGGCCTTGCAGCTTGATTTAAACGCTATCAGTAAAACGCTTAAATTTGTCCCAGAAGCCGAAGCTC
TGCAGGCTAATGAGCTAGCCCAGCTGTCTATTGAAATCGATTATTTCTATGTGACAGCGCAATCTAAGGTAGTGCTAGCG
GGTCGCTACCAGTATCACAACAAGCTAGAAATGGAAGGTAAAGCAAAGGGCCGACAGGCCATTGAACAGACTTTTACCTT
TGAGGAACCATTAGAAGCGGATGGATATTCGCAATCCGTTACCCAGATGAGAAGTTTGCTGTTAAAACTGGCTAAACAGG
TCGCTGTCAATATTGAGCGTTAG

Upstream 100 bases:

>100_bases
TTAAGCCTTTGTTGGAGCAATTAAAGCGCAAACCGAATGGTCTTATCTTTGACTCTGGTAGCCAAGATTTAGAGCCAAAA
AAACATTCAGAGGTTAACCA

Downstream 100 bases:

>100_bases
TACTAGTGTTACCATCGCGCTAGCTTTATTCTAAATAGCGATGCCTGTCTCTTGTTTCTTATTTACAGCCTTCAGTTTCT
AACAGAGGAGTCGCAGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRLILTMRLILTMRLGLISLFGAALLLTGCSSASSSNSYYLLNSYSAAGNASQGQIALNQGVEPSEKTNVGLTVQLAEYL
NSPYLVMQINQHKLSYASFHMWAEPLADETLKALQLDLNAISKTLKFVPEAEALQANELAQLSIEIDYFYVTAQSKVVLA
GRYQYHNKLEMEGKAKGRQAIEQTFTFEEPLEADGYSQSVTQMRSLLLKLAKQVAVNIER

Sequences:

>Translated_220_residues
MRLILTMRLILTMRLGLISLFGAALLLTGCSSASSSNSYYLLNSYSAAGNASQGQIALNQGVEPSEKTNVGLTVQLAEYL
NSPYLVMQINQHKLSYASFHMWAEPLADETLKALQLDLNAISKTLKFVPEAEALQANELAQLSIEIDYFYVTAQSKVVLA
GRYQYHNKLEMEGKAKGRQAIEQTFTFEEPLEADGYSQSVTQMRSLLLKLAKQVAVNIER
>Mature_220_residues
MRLILTMRLILTMRLGLISLFGAALLLTGCSSASSSNSYYLLNSYSAAGNASQGQIALNQGVEPSEKTNVGLTVQLAEYL
NSPYLVMQINQHKLSYASFHMWAEPLADETLKALQLDLNAISKTLKFVPEAEALQANELAQLSIEIDYFYVTAQSKVVLA
GRYQYHNKLEMEGKAKGRQAIEQTFTFEEPLEADGYSQSVTQMRSLLLKLAKQVAVNIER

Specific function: Unknown

COG id: COG3009

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24392; Mature: 24392

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLILTMRLILTMRLGLISLFGAALLLTGCSSASSSNSYYLLNSYSAAGNASQGQIALNQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEECC
GVEPSEKTNVGLTVQLAEYLNSPYLVMQINQHKLSYASFHMWAEPLADETLKALQLDLNA
CCCCCCCCCCCEEEEEHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISKTLKFVPEAEALQANELAQLSIEIDYFYVTAQSKVVLAGRYQYHNKLEMEGKAKGRQA
HHHHHHHCCCHHHHCCCCEEEEEEEEEEEEEEECCEEEEEEEECCCCEECCCCCHHHHHH
IEQTFTFEEPLEADGYSQSVTQMRSLLLKLAKQVAVNIER
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRLILTMRLILTMRLGLISLFGAALLLTGCSSASSSNSYYLLNSYSAAGNASQGQIALNQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEECC
GVEPSEKTNVGLTVQLAEYLNSPYLVMQINQHKLSYASFHMWAEPLADETLKALQLDLNA
CCCCCCCCCCCEEEEEHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISKTLKFVPEAEALQANELAQLSIEIDYFYVTAQSKVVLAGRYQYHNKLEMEGKAKGRQA
HHHHHHHCCCHHHHCCCCEEEEEEEEEEEEEEECCEEEEEEEECCCCEECCCCCHHHHHH
IEQTFTFEEPLEADGYSQSVTQMRSLLLKLAKQVAVNIER
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA