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The map label for this gene is yqjE [H]

Identifier: 167625258

GI number: 167625258

Start: 4087628

End: 4088734

Strand: Reverse

Name: yqjE [H]

Synonym: Shal_3347

Alternate gene names: 167625258

Gene position: 4088734-4087628 (Counterclockwise)

Preceding gene: 167625259

Following gene: 167625256

Centisome position: 78.22

GC content: 48.42

Gene sequence:

>1107_bases
ATGAAAAATATCAATCAAGAAAGACTCGTTGAACATTTTATCTCACTGGTGAAAATCGACAGTGAATCAGGTAATGAAAA
AGCGGTTGCAGAAACCTTAGTTGAGCAGCTCGGTCAACTAGGCTTTGAGGTGACTCGGCTTGCTGTACCAGGCTCGATTT
CAAACGGCTTTAACATCTACGCTAAGCTACAAGGCGAGCTTGATGGTAGCATTGTTTTCAGTAGCCATATGGACACTGTA
ACACCGGGCAATGGTATCGAGCCTATCATCGAAGACGGCATTATTCGCTCTCAAGGCGACACCATTTTAGGTGGCGATGA
TAAATCGGGGATCGCCGCTGTGATGGAAGCGGTTCGTAGCATTCAAGAGAGCGGCGAAGCCCATAAAACGATTGAAGTGG
CCTTTACCGTTTATGAAGAGCGCGGCATGCACGGTTCAAAAAACTTCGATATCAGCAAGATTGAATCTAAACAAGCGATT
GTGCTCGACTCCGGTGGTCCTATTGGCACCATTATTACTACCGCTCCGGGTCAGCAAAGCTTAAAAGTGACCATCAAGGG
TAAGCCTGCCCATGCGGGACTTGAGCCGGAAGCTGGCATCAATGCCCTGACGGTAGCAGCCGATGCCATTAGCAAGATGC
AGCTGAGCCGTATCGATGATGAAACCACCGCTAATATCGGTGTGGTGCGAGGCGGTCAGGCGACCAATATCGTGATGCCA
GAGCTGCATATTGAAGCAGAAGCTCGTTCATTGGATGATGACAAGCTAGCAAAGCAAGTAACGCATATGGTGTCGACCTT
TGAAGCGGCGGCGCAAAAGCATGGTGCGAGTATAGAGATTGACTCAAGCCGCTCTTATAACGCCTACCATATCTCAGATG
ATGATGCGCATGTAGTTGCGATTAAGGCTGCCTTTGAGGCCATAGGGATTGAAGCGGTTACTAAGCCTACGGGTGGCGGT
TCTGATGCCAACATCTTTAATGAACAAGGTTTGAAGACGGTTAACTTGTCGACGGGCATGTCGAAGGTGCACACCACCGA
TGAGTTCATTGCCGTTGCAGATATGGTCGCAATTACCAACTTTGTTCGCGCTTATCTAACGCGTTAA

Upstream 100 bases:

>100_bases
GATGAGTATTCGGGCATTTCTTTGATATAACTCAGCTACCCCATGTATCACTTGGGTTTATGATGCTGGACTATATTCGC
AAAAAAGAAGTCGCATACAG

Downstream 100 bases:

>100_bases
GTACAACGTCAGTTAATTGCCACGCTAGCTATCTCGCTAATTGCTGCGTTAAATTTAGCAATAGCAGGATGTACAGCCTG
TGGGGATGAGCCGCTCTCTT

Product: peptidase T-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKNINQERLVEHFISLVKIDSESGNEKAVAETLVEQLGQLGFEVTRLAVPGSISNGFNIYAKLQGELDGSIVFSSHMDTV
TPGNGIEPIIEDGIIRSQGDTILGGDDKSGIAAVMEAVRSIQESGEAHKTIEVAFTVYEERGMHGSKNFDISKIESKQAI
VLDSGGPIGTIITTAPGQQSLKVTIKGKPAHAGLEPEAGINALTVAADAISKMQLSRIDDETTANIGVVRGGQATNIVMP
ELHIEAEARSLDDDKLAKQVTHMVSTFEAAAQKHGASIEIDSSRSYNAYHISDDDAHVVAIKAAFEAIGIEAVTKPTGGG
SDANIFNEQGLKTVNLSTGMSKVHTTDEFIAVADMVAITNFVRAYLTR

Sequences:

>Translated_368_residues
MKNINQERLVEHFISLVKIDSESGNEKAVAETLVEQLGQLGFEVTRLAVPGSISNGFNIYAKLQGELDGSIVFSSHMDTV
TPGNGIEPIIEDGIIRSQGDTILGGDDKSGIAAVMEAVRSIQESGEAHKTIEVAFTVYEERGMHGSKNFDISKIESKQAI
VLDSGGPIGTIITTAPGQQSLKVTIKGKPAHAGLEPEAGINALTVAADAISKMQLSRIDDETTANIGVVRGGQATNIVMP
ELHIEAEARSLDDDKLAKQVTHMVSTFEAAAQKHGASIEIDSSRSYNAYHISDDDAHVVAIKAAFEAIGIEAVTKPTGGG
SDANIFNEQGLKTVNLSTGMSKVHTTDEFIAVADMVAITNFVRAYLTR
>Mature_368_residues
MKNINQERLVEHFISLVKIDSESGNEKAVAETLVEQLGQLGFEVTRLAVPGSISNGFNIYAKLQGELDGSIVFSSHMDTV
TPGNGIEPIIEDGIIRSQGDTILGGDDKSGIAAVMEAVRSIQESGEAHKTIEVAFTVYEERGMHGSKNFDISKIESKQAI
VLDSGGPIGTIITTAPGQQSLKVTIKGKPAHAGLEPEAGINALTVAADAISKMQLSRIDDETTANIGVVRGGQATNIVMP
ELHIEAEARSLDDDKLAKQVTHMVSTFEAAAQKHGASIEIDSSRSYNAYHISDDDAHVVAIKAAFEAIGIEAVTKPTGGG
SDANIFNEQGLKTVNLSTGMSKVHTTDEFIAVADMVAITNFVRAYLTR

Specific function: Could be a peptidase [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1787372, Length=399, Percent_Identity=25.062656641604, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010162
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.4.11.4

Molecular weight: Translated: 39070; Mature: 39070

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNINQERLVEHFISLVKIDSESGNEKAVAETLVEQLGQLGFEVTRLAVPGSISNGFNIY
CCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEE
AKLQGELDGSIVFSSHMDTVTPGNGIEPIIEDGIIRSQGDTILGGDDKSGIAAVMEAVRS
EEEECCCCCEEEEECCCCCCCCCCCCCHHHHCCEEECCCCEEECCCCCCHHHHHHHHHHH
IQESGEAHKTIEVAFTVYEERGMHGSKNFDISKIESKQAIVLDSGGPIGTIITTAPGQQS
HHHCCCCCEEEEEEEEEEHHCCCCCCCCCCCEEECCCCEEEEECCCCEEEEEEECCCCCE
LKVTIKGKPAHAGLEPEAGINALTVAADAISKMQLSRIDDETTANIGVVRGGQATNIVMP
EEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECC
ELHIEAEARSLDDDKLAKQVTHMVSTFEAAAQKHGASIEIDSSRSYNAYHISDDDAHVVA
CEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCEEEE
IKAAFEAIGIEAVTKPTGGGSDANIFNEQGLKTVNLSTGMSKVHTTDEFIAVADMVAITN
EEEHHHHHCCEEEECCCCCCCCCCEECCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHH
FVRAYLTR
HHHHHHCC
>Mature Secondary Structure
MKNINQERLVEHFISLVKIDSESGNEKAVAETLVEQLGQLGFEVTRLAVPGSISNGFNIY
CCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEE
AKLQGELDGSIVFSSHMDTVTPGNGIEPIIEDGIIRSQGDTILGGDDKSGIAAVMEAVRS
EEEECCCCCEEEEECCCCCCCCCCCCCHHHHCCEEECCCCEEECCCCCCHHHHHHHHHHH
IQESGEAHKTIEVAFTVYEERGMHGSKNFDISKIESKQAIVLDSGGPIGTIITTAPGQQS
HHHCCCCCEEEEEEEEEEHHCCCCCCCCCCCEEECCCCEEEEECCCCEEEEEEECCCCCE
LKVTIKGKPAHAGLEPEAGINALTVAADAISKMQLSRIDDETTANIGVVRGGQATNIVMP
EEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECC
ELHIEAEARSLDDDKLAKQVTHMVSTFEAAAQKHGASIEIDSSRSYNAYHISDDDAHVVA
CEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCEEEE
IKAAFEAIGIEAVTKPTGGGSDANIFNEQGLKTVNLSTGMSKVHTTDEFIAVADMVAITN
EEEHHHHHCCEEEECCCCCCCCCCEECCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHH
FVRAYLTR
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Aminopeptidases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]