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The map label for this gene is pqiB [H]

Identifier: 167625260

GI number: 167625260

Start: 4089607

End: 4091259

Strand: Reverse

Name: pqiB [H]

Synonym: Shal_3349

Alternate gene names: 167625260

Gene position: 4091259-4089607 (Counterclockwise)

Preceding gene: 167625261

Following gene: 167625259

Centisome position: 78.27

GC content: 42.04

Gene sequence:

>1653_bases
ATGAAAACACAACAGCCCCTTGATGCAGAGATTAAAACAGTGAAAACAATCTCTACTATCTGGTTTGTGCCCATAGTTGC
CCTATTGATTGGTGGCTGGATGGTGTATTACCACATAAGTAACCAGGGCCCGACTGTGACCATTCTTTTTAATTCTGCCG
AGGGGATGGAAGCGGGAAAAACAAAAATAAAATCGAGATCGGTCACTATTGGCGAGGTTGAAACCATTAAGCTCAATGAT
CAAGATGATGGGGTTATTGTCACAGCAAGAATGTCAAAAAATACTGAAAAAATGCTGATGGAAGACAGTAAGTTTTGGGT
GGTGAGCCCAAAAGTTGCCCTCTCAGGGATCACCGGTTTAGATACATTAATATCCGGTGTGTATATTGAGCTCTCACCGG
GCTCATCTAAGCAAGGTCGTAATGAATTTACCGCCTTAAATTCTCCTCCCATCACGCCAAAGGGGACGCCAGGCTTACAA
GTCACATTAATCAGTGATAAGGAGTTCGCTTATTCTCAGGGGGACCCTATTATCTATAAAGGATTAACCGTCGGTAAAAT
TGAAGAGGTGCACTTTAATATCAAAGAGCGCGCTGTTTATTATAATGCATTTATTCATGCTCCATACCATGAGCTACTCA
CTAATAACACTCGATTCTGGGATGCTAGCGGCTTAGTGGTTGACCTCAATGCTGAGGGGATTTCACTTAAAACAGGTAGT
CTTCAAACCATATTAACCAATGGAGTGACCTTTGGCATACCGGACGGAATGCCATTGGGAACTAAAATTAATGAGCTAGA
CTCTTTTCAAATTTTTGATGACTATCAAGATGCCAGTAATGCCCGTTATAAATACTCACTACAATATGTGATGTTAGTGA
GTGATACGATCCGAGGATTAAGTGTCGGTGCGCCAGTGGAGTATCGCGGTGTGACGGTAGGTGAGGTTTCCTCTGTTGAA
TTGATAACCACAGATCCTAGCATCATGTACAGCGAGGCAGTTCGTATTCCTGTGTTGCTCAGTATACAGCCTGGTCGAAT
TGGCCTGCCTGATAATGAGCAAGGCATGGCCTTGATGAAGAAACATAATACCCTGTGGATTAAAGAAGGATTAAGGGCCA
GCTTGAAAACAGGCAGCTTACTGACAGGAAGTTTATTTGTTGAGTTACAGCATTTTGATTTGCCACGGCTAGAGAAGCTT
GATATTTATCAAAATTATCCAGTAATCCCGACCGTAAAAGATCAGTATTCTCAGTTGATTGATAAAGTTGAGCTATTTGT
CGACAAGCTGAATGGTTTGCCGTTAGATGAACTAACGGGCAATGCCAATGTCACCCTAGTTAATGCTGCCAGCCTGCTTA
GCGAGCTTCAGCATACGAGTCAAAATCTAGATAAGTTATTGGTTAGTGCTGAACAGCAAGGCTTAATTAAGCAGTTAAGA
GTCGCATTGGAGAGTTTTGAATCATTGAGCCAAGATTTCTCATCTGGATCTCAAGGTTATGAGGGGTTACAGGAAGCGAT
GAAGAGTATTTCAGATGTGATGTATGAGCTTAAGCCTTTGTTGGAGCAATTAAAGCGCAAACCGAATGGTCTTATCTTTG
ACTCTGGTAGCCAAGATTTAGAGCCAAAAAAACATTCAGAGGTTAACCAATGA

Upstream 100 bases:

>100_bases
CTGGCCCTGCTAGTTTGGCTTTCTCGGCGGTCGTCATCATAACTATGTTGGCTGCAATGAGCTTTGAGCCGAAATTAATC
TATAACGAGTATTAAAATTT

Downstream 100 bases:

>100_bases
GACTGATCTTAACAATGAGGCTGATATTAACAATGAGACTTGGCTTAATAAGTTTATTCGGTGCCGCCTTGTTACTTACA
GGCTGCAGTTCTGCTTCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MKTQQPLDAEIKTVKTISTIWFVPIVALLIGGWMVYYHISNQGPTVTILFNSAEGMEAGKTKIKSRSVTIGEVETIKLND
QDDGVIVTARMSKNTEKMLMEDSKFWVVSPKVALSGITGLDTLISGVYIELSPGSSKQGRNEFTALNSPPITPKGTPGLQ
VTLISDKEFAYSQGDPIIYKGLTVGKIEEVHFNIKERAVYYNAFIHAPYHELLTNNTRFWDASGLVVDLNAEGISLKTGS
LQTILTNGVTFGIPDGMPLGTKINELDSFQIFDDYQDASNARYKYSLQYVMLVSDTIRGLSVGAPVEYRGVTVGEVSSVE
LITTDPSIMYSEAVRIPVLLSIQPGRIGLPDNEQGMALMKKHNTLWIKEGLRASLKTGSLLTGSLFVELQHFDLPRLEKL
DIYQNYPVIPTVKDQYSQLIDKVELFVDKLNGLPLDELTGNANVTLVNAASLLSELQHTSQNLDKLLVSAEQQGLIKQLR
VALESFESLSQDFSSGSQGYEGLQEAMKSISDVMYELKPLLEQLKRKPNGLIFDSGSQDLEPKKHSEVNQ

Sequences:

>Translated_550_residues
MKTQQPLDAEIKTVKTISTIWFVPIVALLIGGWMVYYHISNQGPTVTILFNSAEGMEAGKTKIKSRSVTIGEVETIKLND
QDDGVIVTARMSKNTEKMLMEDSKFWVVSPKVALSGITGLDTLISGVYIELSPGSSKQGRNEFTALNSPPITPKGTPGLQ
VTLISDKEFAYSQGDPIIYKGLTVGKIEEVHFNIKERAVYYNAFIHAPYHELLTNNTRFWDASGLVVDLNAEGISLKTGS
LQTILTNGVTFGIPDGMPLGTKINELDSFQIFDDYQDASNARYKYSLQYVMLVSDTIRGLSVGAPVEYRGVTVGEVSSVE
LITTDPSIMYSEAVRIPVLLSIQPGRIGLPDNEQGMALMKKHNTLWIKEGLRASLKTGSLLTGSLFVELQHFDLPRLEKL
DIYQNYPVIPTVKDQYSQLIDKVELFVDKLNGLPLDELTGNANVTLVNAASLLSELQHTSQNLDKLLVSAEQQGLIKQLR
VALESFESLSQDFSSGSQGYEGLQEAMKSISDVMYELKPLLEQLKRKPNGLIFDSGSQDLEPKKHSEVNQ
>Mature_550_residues
MKTQQPLDAEIKTVKTISTIWFVPIVALLIGGWMVYYHISNQGPTVTILFNSAEGMEAGKTKIKSRSVTIGEVETIKLND
QDDGVIVTARMSKNTEKMLMEDSKFWVVSPKVALSGITGLDTLISGVYIELSPGSSKQGRNEFTALNSPPITPKGTPGLQ
VTLISDKEFAYSQGDPIIYKGLTVGKIEEVHFNIKERAVYYNAFIHAPYHELLTNNTRFWDASGLVVDLNAEGISLKTGS
LQTILTNGVTFGIPDGMPLGTKINELDSFQIFDDYQDASNARYKYSLQYVMLVSDTIRGLSVGAPVEYRGVTVGEVSSVE
LITTDPSIMYSEAVRIPVLLSIQPGRIGLPDNEQGMALMKKHNTLWIKEGLRASLKTGSLLTGSLFVELQHFDLPRLEKL
DIYQNYPVIPTVKDQYSQLIDKVELFVDKLNGLPLDELTGNANVTLVNAASLLSELQHTSQNLDKLLVSAEQQGLIKQLR
VALESFESLSQDFSSGSQGYEGLQEAMKSISDVMYELKPLLEQLKRKPNGLIFDSGSQDLEPKKHSEVNQ

Specific function: Unknown

COG id: COG3008

COG function: function code R; Paraquat-inducible protein B

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiB family [H]

Homologues:

Organism=Escherichia coli, GI1787184, Length=542, Percent_Identity=38.5608856088561, Blast_Score=407, Evalue=1e-115,
Organism=Escherichia coli, GI87081984, Length=344, Percent_Identity=27.6162790697674, Blast_Score=154, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 60721; Mature: 60721

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQQPLDAEIKTVKTISTIWFVPIVALLIGGWMVYYHISNQGPTVTILFNSAEGMEAGK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCCCCCHHH
TKIKSRSVTIGEVETIKLNDQDDGVIVTARMSKNTEKMLMEDSKFWVVSPKVALSGITGL
HHHCCCCEEECCEEEEEECCCCCCEEEEEECCCCCHHHHCCCCCEEEECCCHHCCCCCHH
DTLISGVYIELSPGSSKQGRNEFTALNSPPITPKGTPGLQVTLISDKEFAYSQGDPIIYK
HHHHCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEE
GLTVGKIEEVHFNIKERAVYYNAFIHAPYHELLTNNTRFWDASGLVVDLNAEGISLKTGS
CCEECCEEEEEECHHHHEEEEEEEEECCHHHHHCCCCEEEECCCEEEEECCCCEEEECCC
LQTILTNGVTFGIPDGMPLGTKINELDSFQIFDDYQDASNARYKYSLQYVMLVSDTIRGL
CHHHEECCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEEEHHHCCC
SVGAPVEYRGVTVGEVSSVELITTDPSIMYSEAVRIPVLLSIQPGRIGLPDNEQGMALMK
CCCCCCEECCEEECCCCEEEEEECCCCCEECCCCCCEEEEEECCCCCCCCCCCCCCEEEC
KHNTLWIKEGLRASLKTGSLLTGSLFVELQHFDLPRLEKLDIYQNYPVIPTVKDQYSQLI
CCCEEEEECCCHHHCCCCCEEEEEEEEEEECCCCCCCCEEHHHCCCCCCCCCHHHHHHHH
DKVELFVDKLNGLPLDELTGNANVTLVNAASLLSELQHTSQNLDKLLVSAEQQGLIKQLR
HHHHHHHHHHCCCCHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALESFESLSQDFSSGSQGYEGLQEAMKSISDVMYELKPLLEQLKRKPNGLIFDSGSQDL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC
EPKKHSEVNQ
CCCCCCCCCC
>Mature Secondary Structure
MKTQQPLDAEIKTVKTISTIWFVPIVALLIGGWMVYYHISNQGPTVTILFNSAEGMEAGK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCCCCCHHH
TKIKSRSVTIGEVETIKLNDQDDGVIVTARMSKNTEKMLMEDSKFWVVSPKVALSGITGL
HHHCCCCEEECCEEEEEECCCCCCEEEEEECCCCCHHHHCCCCCEEEECCCHHCCCCCHH
DTLISGVYIELSPGSSKQGRNEFTALNSPPITPKGTPGLQVTLISDKEFAYSQGDPIIYK
HHHHCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEE
GLTVGKIEEVHFNIKERAVYYNAFIHAPYHELLTNNTRFWDASGLVVDLNAEGISLKTGS
CCEECCEEEEEECHHHHEEEEEEEEECCHHHHHCCCCEEEECCCEEEEECCCCEEEECCC
LQTILTNGVTFGIPDGMPLGTKINELDSFQIFDDYQDASNARYKYSLQYVMLVSDTIRGL
CHHHEECCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEEEHHHCCC
SVGAPVEYRGVTVGEVSSVELITTDPSIMYSEAVRIPVLLSIQPGRIGLPDNEQGMALMK
CCCCCCEECCEEECCCCEEEEEECCCCCEECCCCCCEEEEEECCCCCCCCCCCCCCEEEC
KHNTLWIKEGLRASLKTGSLLTGSLFVELQHFDLPRLEKLDIYQNYPVIPTVKDQYSQLI
CCCEEEEECCCHHHCCCCCEEEEEEEEEEECCCCCCCCEEHHHCCCCCCCCCHHHHHHHH
DKVELFVDKLNGLPLDELTGNANVTLVNAASLLSELQHTSQNLDKLLVSAEQQGLIKQLR
HHHHHHHHHHCCCCHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALESFESLSQDFSSGSQGYEGLQEAMKSISDVMYELKPLLEQLKRKPNGLIFDSGSQDL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC
EPKKHSEVNQ
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7751275 [H]