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The map label for this gene is ygcE [H]

Identifier: 167625239

GI number: 167625239

Start: 4063739

End: 4065355

Strand: Reverse

Name: ygcE [H]

Synonym: Shal_3328

Alternate gene names: 167625239

Gene position: 4065355-4063739 (Counterclockwise)

Preceding gene: 167625240

Following gene: 167625238

Centisome position: 77.78

GC content: 52.94

Gene sequence:

>1617_bases
GTGATAGACAAAAAACAGCAGAGCCAGACACAAACACAAATGCAGATACCAGCAGAGACTCCAGTAGAGAGGCAAGCGGA
TTACATATTAACCATAGACAACGGTACTCAGAGCGTACGAGCCATAGTGTTTGATGCAAAAGGTCAGCTTGTTGCTAAGT
CACAGGTCAAACTGACCCCCTATGAGTCGCCGCAATCGGGCTGGTGTGAGCAAAGTGGCGACTATTACTGGCAAAACGTT
TGTGTTGCTTGTCAGGCGCTCTGGCAACAAGGCGTTGATAAAGCACGCATCAAAGGCATGTCGGTGACCACTCAGCGCGG
CACCATGTTGCCGTTAGACCGTGATGGAGAGCCCCTGTATCCGGCGATCCTCTGGCTCGATCAGCGCAAAGCCGAGAGTG
AGTCCGGTTTGGGAGGGCTGTGGGACCCGCTGTTTAAGCTGCTGGGACTGAGTGAAACCATTGCCAACTTTCGAAGTCGT
GCTCAGCCTAATTGGCTCTATATGGCTAAGCCTGAACTGTGGCACAAGACCCATAAATTTGCGTTTTTGTCGGGATTTTT
CCATCACAAGCTCACGGGAGAGTGGGCTGATTCGGTGGGCTCACAAGTGGGCTATCTGCCGTTCGATTATAAGAAGCACA
GATGGGCACCTAGGTGGGACTGGAAGTGGCGCGCACTGCATGTGAGACCCGAGCAGCTATTAACGCTGCTAAAGCCCGGT
GACAAGGTGGGCGAAATCACCGAAAAAGCCAGCGAACAAACTGGACTTCCTCAAGGGTTGCCAGTGATTGCCGCCGCAGC
CGATAAGGCCTGTGAGGTGCTCGGCTCGGGCGGGCAAAACTCCGACGTGGGCTGTTTAAGCTTTGGCACCACGGCTACCA
TCAATGTGACCATGAAGCGCTATACCGAAGCGGTGCGTTTTCTTCCTGCCTATCCGTCGGCCATTGCCGGGGCATTTTGC
AGTGAGGTGATGCTCTATCGAGGCTTTTGGATGGTGAGTTGGTTTAAGGAACAGTTTGCTCATATCGAGCAGGAAAAAGC
ACTACAAGCAGGGATTGAAGCCGAAGCGCTATTTGATGAGCTGGTGAGTAGTGTGCCACCAGGTTCCATGGGGCTGATGT
TGCAGCCCTATTGGGGGCCGGGGGTAAAGCAGCCCGAAGCCAAGGGCGCTGTGATCGGCTTTGGTGATGTGCATACCCGG
GCTCACCTGTACCGCGCAATTCTAGAGGGATTAGCCTTTGGGCTTAAAGAGGGGTTGGAAGCGATTGAGAAAAAGGGCGG
CTGTAAAGTAAAAGAGCTACGAATTTCTGGTGGTGGTGCCAAGAGTGATGCTGCGATGCAGATAGCCGCCGACGTGTTTG
GATTGCCAGCGGTGCGGGCGCACACGGTTGAGACATCAGGGCTGGGCGCCGCGATAGCAGCATCTGTGGGACTGGGACTG
CATGATGATTTTGATAGCGCCATCAAGGCCATGGTGCATGACGGTGAGCGTTTTGAGCCTGATAATGAGCACCACCTTAT
GTATCAGCGACTCTATAAAGAGATCTATCTTGATATCTATAAGAAGTTGCAGCCACTATATGGCAAGATCCGTGATATTA
CGGGCTATCCGGAATAG

Upstream 100 bases:

>100_bases
CTTGGTCAATGACAAAGGCTGAGAGTGAGTGGTTGCGATTCGAGCAGATCATGAATGCTAGCTACCGCTTACCGAGCCAA
CAAGAGAAAAGGGAGTGTCT

Downstream 100 bases:

>100_bases
AAGGTCCTAGGTTCTAGGAAAGGCAAAGAAAGGTTCTAGGAAAAACAAAGTCGGCCTGCGGCCTTACGAACGTGACAGTG
TCACTGACGGAACGCTGCGC

Product: carbohydrate kinase FGGY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MIDKKQQSQTQTQMQIPAETPVERQADYILTIDNGTQSVRAIVFDAKGQLVAKSQVKLTPYESPQSGWCEQSGDYYWQNV
CVACQALWQQGVDKARIKGMSVTTQRGTMLPLDRDGEPLYPAILWLDQRKAESESGLGGLWDPLFKLLGLSETIANFRSR
AQPNWLYMAKPELWHKTHKFAFLSGFFHHKLTGEWADSVGSQVGYLPFDYKKHRWAPRWDWKWRALHVRPEQLLTLLKPG
DKVGEITEKASEQTGLPQGLPVIAAAADKACEVLGSGGQNSDVGCLSFGTTATINVTMKRYTEAVRFLPAYPSAIAGAFC
SEVMLYRGFWMVSWFKEQFAHIEQEKALQAGIEAEALFDELVSSVPPGSMGLMLQPYWGPGVKQPEAKGAVIGFGDVHTR
AHLYRAILEGLAFGLKEGLEAIEKKGGCKVKELRISGGGAKSDAAMQIAADVFGLPAVRAHTVETSGLGAAIAASVGLGL
HDDFDSAIKAMVHDGERFEPDNEHHLMYQRLYKEIYLDIYKKLQPLYGKIRDITGYPE

Sequences:

>Translated_538_residues
MIDKKQQSQTQTQMQIPAETPVERQADYILTIDNGTQSVRAIVFDAKGQLVAKSQVKLTPYESPQSGWCEQSGDYYWQNV
CVACQALWQQGVDKARIKGMSVTTQRGTMLPLDRDGEPLYPAILWLDQRKAESESGLGGLWDPLFKLLGLSETIANFRSR
AQPNWLYMAKPELWHKTHKFAFLSGFFHHKLTGEWADSVGSQVGYLPFDYKKHRWAPRWDWKWRALHVRPEQLLTLLKPG
DKVGEITEKASEQTGLPQGLPVIAAAADKACEVLGSGGQNSDVGCLSFGTTATINVTMKRYTEAVRFLPAYPSAIAGAFC
SEVMLYRGFWMVSWFKEQFAHIEQEKALQAGIEAEALFDELVSSVPPGSMGLMLQPYWGPGVKQPEAKGAVIGFGDVHTR
AHLYRAILEGLAFGLKEGLEAIEKKGGCKVKELRISGGGAKSDAAMQIAADVFGLPAVRAHTVETSGLGAAIAASVGLGL
HDDFDSAIKAMVHDGERFEPDNEHHLMYQRLYKEIYLDIYKKLQPLYGKIRDITGYPE
>Mature_538_residues
MIDKKQQSQTQTQMQIPAETPVERQADYILTIDNGTQSVRAIVFDAKGQLVAKSQVKLTPYESPQSGWCEQSGDYYWQNV
CVACQALWQQGVDKARIKGMSVTTQRGTMLPLDRDGEPLYPAILWLDQRKAESESGLGGLWDPLFKLLGLSETIANFRSR
AQPNWLYMAKPELWHKTHKFAFLSGFFHHKLTGEWADSVGSQVGYLPFDYKKHRWAPRWDWKWRALHVRPEQLLTLLKPG
DKVGEITEKASEQTGLPQGLPVIAAAADKACEVLGSGGQNSDVGCLSFGTTATINVTMKRYTEAVRFLPAYPSAIAGAFC
SEVMLYRGFWMVSWFKEQFAHIEQEKALQAGIEAEALFDELVSSVPPGSMGLMLQPYWGPGVKQPEAKGAVIGFGDVHTR
AHLYRAILEGLAFGLKEGLEAIEKKGGCKVKELRISGGGAKSDAAMQIAADVFGLPAVRAHTVETSGLGAAIAASVGLGL
HDDFDSAIKAMVHDGERFEPDNEHHLMYQRLYKEIYLDIYKKLQPLYGKIRDITGYPE

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI42794763, Length=482, Percent_Identity=24.2738589211618, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI4504007, Length=481, Percent_Identity=23.9085239085239, Blast_Score=100, Evalue=6e-21,
Organism=Homo sapiens, GI189409120, Length=481, Percent_Identity=23.9085239085239, Blast_Score=100, Evalue=6e-21,
Organism=Homo sapiens, GI41393575, Length=476, Percent_Identity=25.8403361344538, Blast_Score=99, Evalue=1e-20,
Organism=Escherichia coli, GI1789138, Length=513, Percent_Identity=28.8499025341131, Blast_Score=216, Evalue=3e-57,
Organism=Escherichia coli, GI1787789, Length=501, Percent_Identity=26.7465069860279, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI1789168, Length=500, Percent_Identity=26.4, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1790005, Length=518, Percent_Identity=25.8687258687259, Blast_Score=132, Evalue=8e-32,
Organism=Escherichia coli, GI1790361, Length=504, Percent_Identity=22.2222222222222, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1789987, Length=503, Percent_Identity=24.2544731610338, Blast_Score=97, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17535599, Length=462, Percent_Identity=25.5411255411255, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21357867, Length=532, Percent_Identity=25, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24656367, Length=521, Percent_Identity=25.5278310940499, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24656372, Length=258, Percent_Identity=25.968992248062, Blast_Score=76, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: NA

Molecular weight: Translated: 59703; Mature: 59703

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDKKQQSQTQTQMQIPAETPVERQADYILTIDNGTQSVRAIVFDAKGQLVAKSQVKLTP
CCCCHHHHHHHHHEECCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCEEECCEEEECC
YESPQSGWCEQSGDYYWQNVCVACQALWQQGVDKARIKGMSVTTQRGTMLPLDRDGEPLY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCCCCCCCCCCCCC
PAILWLDQRKAESESGLGGLWDPLFKLLGLSETIANFRSRAQPNWLYMAKPELWHKTHKF
HHHEEEHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHH
AFLSGFFHHKLTGEWADSVGSQVGYLPFDYKKHRWAPRWDWKWRALHVRPEQLLTLLKPG
HHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEEEEEECHHHHHHHHCCC
DKVGEITEKASEQTGLPQGLPVIAAAADKACEVLGSGGQNSDVGCLSFGTTATINVTMKR
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEEHHH
YTEAVRFLPAYPSAIAGAFCSEVMLYRGFWMVSWFKEQFAHIEQEKALQAGIEAEALFDE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LVSSVPPGSMGLMLQPYWGPGVKQPEAKGAVIGFGDVHTRAHLYRAILEGLAFGLKEGLE
HHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
AIEKKGGCKVKELRISGGGAKSDAAMQIAADVFGLPAVRAHTVETSGLGAAIAASVGLGL
HHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCC
HDDFDSAIKAMVHDGERFEPDNEHHLMYQRLYKEIYLDIYKKLQPLYGKIRDITGYPE
CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIDKKQQSQTQTQMQIPAETPVERQADYILTIDNGTQSVRAIVFDAKGQLVAKSQVKLTP
CCCCHHHHHHHHHEECCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCEEECCEEEECC
YESPQSGWCEQSGDYYWQNVCVACQALWQQGVDKARIKGMSVTTQRGTMLPLDRDGEPLY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCCCCCCCCCCCCC
PAILWLDQRKAESESGLGGLWDPLFKLLGLSETIANFRSRAQPNWLYMAKPELWHKTHKF
HHHEEEHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHH
AFLSGFFHHKLTGEWADSVGSQVGYLPFDYKKHRWAPRWDWKWRALHVRPEQLLTLLKPG
HHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEEEEEECHHHHHHHHCCC
DKVGEITEKASEQTGLPQGLPVIAAAADKACEVLGSGGQNSDVGCLSFGTTATINVTMKR
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEEHHH
YTEAVRFLPAYPSAIAGAFCSEVMLYRGFWMVSWFKEQFAHIEQEKALQAGIEAEALFDE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LVSSVPPGSMGLMLQPYWGPGVKQPEAKGAVIGFGDVHTRAHLYRAILEGLAFGLKEGLE
HHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
AIEKKGGCKVKELRISGGGAKSDAAMQIAADVFGLPAVRAHTVETSGLGAAIAASVGLGL
HHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCC
HDDFDSAIKAMVHDGERFEPDNEHHLMYQRLYKEIYLDIYKKLQPLYGKIRDITGYPE
CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]