Click here to switch to the map view.

The map label for this gene is 167625238

Identifier: 167625238

GI number: 167625238

Start: 4063106

End: 4063336

Strand: Reverse

Name: 167625238

Synonym: Shal_3327

Alternate gene names: NA

Gene position: 4063336-4063106 (Counterclockwise)

Preceding gene: 167625239

Following gene: 167625237

Centisome position: 77.74

GC content: 42.42

Gene sequence:

>231_bases
ATGACAGACCAAAAGCTTATTTTGATCCTAAAGATCTGTATCAGCATTGGAATTTGCTTGATTCTTGTGGGGATCTACCT
GCACAATTTTAATGAAACCGTTGAAGCCATGGGCGTCAGCGGGATTATCATTAGCGCCGTCTGTGTGGCCTTTGGCATGG
TGTTATCACTGCCAACAAAAATGTACCTGACCTTTTTGTTAGTCAAACGCGAAGCCGATAAGAATCAATAG

Upstream 100 bases:

>100_bases
TTTTGCTCTTCCTAGCAGGGCGGAGCCCGTTCTCGCAGCGAAGCGCCCTAGAACCTAGGACCTTATGCTCTAGAACCTAA
AACTAATGAATGGTGGGAGA

Downstream 100 bases:

>100_bases
CCTAACTACTGAGGAACTCTATTATTCCTCTGCCTTAATCTTATTTTCTTTTATTTAGGTTTGCTGTTCTGTCGCTTCGT
TGTCGCTAATCTGAGCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MTDQKLILILKICISIGICLILVGIYLHNFNETVEAMGVSGIIISAVCVAFGMVLSLPTKMYLTFLLVKREADKNQ

Sequences:

>Translated_76_residues
MTDQKLILILKICISIGICLILVGIYLHNFNETVEAMGVSGIIISAVCVAFGMVLSLPTKMYLTFLLVKREADKNQ
>Mature_75_residues
TDQKLILILKICISIGICLILVGIYLHNFNETVEAMGVSGIIISAVCVAFGMVLSLPTKMYLTFLLVKREADKNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8373; Mature: 8242

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQKLILILKICISIGICLILVGIYLHNFNETVEAMGVSGIIISAVCVAFGMVLSLPTK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHH
MYLTFLLVKREADKNQ
HHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TDQKLILILKICISIGICLILVGIYLHNFNETVEAMGVSGIIISAVCVAFGMVLSLPTK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHH
MYLTFLLVKREADKNQ
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA