Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167625014

Identifier: 167625014

GI number: 167625014

Start: 3784964

End: 3785698

Strand: Reverse

Name: 167625014

Synonym: Shal_3102

Alternate gene names: NA

Gene position: 3785698-3784964 (Counterclockwise)

Preceding gene: 167625015

Following gene: 167625013

Centisome position: 72.43

GC content: 45.44

Gene sequence:

>735_bases
ATGAAGAAAGTATTATTAATGTTGTTGAGCTTATCTTTTGCGGTTCATGCAGACTCTGAAATGGCTAATGTACAGCCGTT
AGACGTGCAAGCACTAGATGTGCAAGCATTAGATGTGCAAGCATTAGATTGGCAAGTGCTGGCGCCAATCATTAACGAGC
AAGACGTGCGTTTACCCGATGTAACAGAGAGTCAAAAACGTTTATTGGCGAGCGTGATTCAACTGCAAGATAGCGCAAAA
GCGCTTGATAAAGAAAATGCCGTTAAAGCACGCCAACGTCTAATTGATGATGGTGTCGATGTTGATGTGGTGCTCGATGC
AAGAGCGCGCTATATGGCGCTTGCGCAGCGAAGAGCCGAGAGTTTAAATACTGAGGTTAATGGTAAGCGGGTTAGCGTGT
CAGGCTTTGTAGTACCGACTAAATTTAATGGCGTCAAAGCAACAGAGTTTCTGTTACTGCCTTATGCCGGTGCATGTATC
CATATGCCGCCCCCTGCGGCAAACCAAATTGTGAAATTGAGTTATCCGCCGGGGTTTGAAGTTGAGAATGTACAATTTCC
AGTGACGGTGCGCGGCACAATCAACGCAGATAAGCAAACTGAGTTAGTGCAATTGGTTGATGGCAAAATGAATGTCACCA
TGGGCTATGCTATGGATGCACTAACGATTGAGAAATATTACGCTGATGCGATACCTAGCCCAGCTGCTCAAGATCACCAA
GCACATGCTCACTAA

Upstream 100 bases:

>100_bases
AGCTTTTATCTATAAGCGGGCTCTACTAGCGGGTTTGAACAATCAGCGTGAAGGGCTATCGGTAAAAGTATATGTAGGAA
ACAATATTTTAGAGGGCGCG

Downstream 100 bases:

>100_bases
TTGATTGATACACATGGAATGAAAGGCGCGTTAACAAGGAAATCTGTATGAATACAATGCGTTTAGCGGTTTTAATCGGA
GGGTGTCTTGCTTGTGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MKKVLLMLLSLSFAVHADSEMANVQPLDVQALDVQALDVQALDWQVLAPIINEQDVRLPDVTESQKRLLASVIQLQDSAK
ALDKENAVKARQRLIDDGVDVDVVLDARARYMALAQRRAESLNTEVNGKRVSVSGFVVPTKFNGVKATEFLLLPYAGACI
HMPPPAANQIVKLSYPPGFEVENVQFPVTVRGTINADKQTELVQLVDGKMNVTMGYAMDALTIEKYYADAIPSPAAQDHQ
AHAH

Sequences:

>Translated_244_residues
MKKVLLMLLSLSFAVHADSEMANVQPLDVQALDVQALDVQALDWQVLAPIINEQDVRLPDVTESQKRLLASVIQLQDSAK
ALDKENAVKARQRLIDDGVDVDVVLDARARYMALAQRRAESLNTEVNGKRVSVSGFVVPTKFNGVKATEFLLLPYAGACI
HMPPPAANQIVKLSYPPGFEVENVQFPVTVRGTINADKQTELVQLVDGKMNVTMGYAMDALTIEKYYADAIPSPAAQDHQ
AHAH
>Mature_244_residues
MKKVLLMLLSLSFAVHADSEMANVQPLDVQALDVQALDVQALDWQVLAPIINEQDVRLPDVTESQKRLLASVIQLQDSAK
ALDKENAVKARQRLIDDGVDVDVVLDARARYMALAQRRAESLNTEVNGKRVSVSGFVVPTKFNGVKATEFLLLPYAGACI
HMPPPAANQIVKLSYPPGFEVENVQFPVTVRGTINADKQTELVQLVDGKMNVTMGYAMDALTIEKYYADAIPSPAAQDHQ
AHAH

Specific function: Unknown

COG id: COG3495

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26742; Mature: 26742

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLLMLLSLSFAVHADSEMANVQPLDVQALDVQALDVQALDWQVLAPIINEQDVRLPD
CHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEEEEEEEEECCCEEEHHHCCCCCCCCCC
VTESQKRLLASVIQLQDSAKALDKENAVKARQRLIDDGVDVDVVLDARARYMALAQRRAE
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
SLNTEVNGKRVSVSGFVVPTKFNGVKATEFLLLPYAGACIHMPPPAANQIVKLSYPPGFE
HCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEECCCEEEECCCCCCCCEEEEECCCCCC
VENVQFPVTVRGTINADKQTELVQLVDGKMNVTMGYAMDALTIEKYYADAIPSPAAQDHQ
CCCEEEEEEEEEECCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCC
AHAH
CCCC
>Mature Secondary Structure
MKKVLLMLLSLSFAVHADSEMANVQPLDVQALDVQALDVQALDWQVLAPIINEQDVRLPD
CHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEEEEEEEEECCCEEEHHHCCCCCCCCCC
VTESQKRLLASVIQLQDSAKALDKENAVKARQRLIDDGVDVDVVLDARARYMALAQRRAE
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
SLNTEVNGKRVSVSGFVVPTKFNGVKATEFLLLPYAGACIHMPPPAANQIVKLSYPPGFE
HCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEECCCEEEECCCCCCCCEEEEECCCCCC
VENVQFPVTVRGTINADKQTELVQLVDGKMNVTMGYAMDALTIEKYYADAIPSPAAQDHQ
CCCEEEEEEEEEECCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCC
AHAH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA