Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167625015

Identifier: 167625015

GI number: 167625015

Start: 3785914

End: 3786732

Strand: Reverse

Name: 167625015

Synonym: Shal_3103

Alternate gene names: NA

Gene position: 3786732-3785914 (Counterclockwise)

Preceding gene: 167625016

Following gene: 167625014

Centisome position: 72.45

GC content: 46.76

Gene sequence:

>819_bases
ATGAGCTGCACAGCAGACAGCATAGGTGACATTAAAGCCTGTGCCCGTCAAAACTACATGCAAGGCGCAACACAAATTAA
GCTGATGTCTAGTGGTGGTGTCGCTTCATCGTTCGACCCGTGGCAGCTTAATGCCTATTCTTTAGAGGAGCTGCAAGCCG
CTGTTGAAGTGGCCAATGCTTATGGCTCCTACGCTATGTCGCACGCTTACAGTAAGGTATCACTGCTGCGCAACTTAGAG
GCTGGCGTGAAAACCTTAGAGCATGCTTTTATGTTCGATAAAGATGTGTACAAGGCGATGAAAAAAAATGATGCCTATAT
GACCACTAATATGACGGCATTTTCGCCTTATTTAGGCGAAATTGAAGCGATTAACTCTAACCCCGCATCGGCGCGTAAGG
CTAAAACCGCGCAAGCCGCTTTTGGTGACTACATCGACAATGTAAATAAGTATCAGCCTAAGCTAGGTTTCCACGTGGAC
TGTGTCGGCGGCGTTGCGGCCTGTGAGCAGCAAGCTGACCACTCGATTTACCTAAGTGGCAAGTTCTTGGGCAACCATTA
CACCTTGCTATCGATGACATCGGTAAACGGCGAAATCGTTAAGCTGGCGGGTGAAGTGTTAGACCCTTACTTTGAAGGTA
AGCTTGGGGTTGTCGAAGAGGGCGCATATGCGGATCTGCTATTAGTGGATGGTAACCCACTACAAGATCTAACGGTAATT
GGTGCAAATGAGAAATGGTTTGATGCCCCTAAGCGTGATGGTATCGAGACTATGAAGATCATCATGAAAGATGGTGTGAT
TTATAAAAACACTCTGTAA

Upstream 100 bases:

>100_bases
GCGCATTTATTGGCCCTACGGGATCCCATGCGGATTTTCGTAACTTTATACGCCTAACGAAACGTTCTACGGCCACAACT
CCTCAGGCGGCCGCCTTGGG

Downstream 100 bases:

>100_bases
TTTGATGGGGGCGTCTTAAGGATAAAGGCAAGCCATCTAGCTTGCCTTTTTTATCAATAGGCTCTTATTTATAGGCTGTC
TTGTCCTGGAATGTGTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Prolidase; Xaa-Pro Dipeptidase; M38 Family Peptidase; Xaa-Pro Dipeptidase Family; Amidohydrolase Family; Metallo-Dependent Hydrolase; Amidase; Amidohydrolase Family Protein; M38 Familypeptidase; Amidohydrolase Imidazolonepropionase; X-Pro Dipeptidase; Imidazolonepropionase; Metal-Dependent Amidohydrolase

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSCTADSIGDIKACARQNYMQGATQIKLMSSGGVASSFDPWQLNAYSLEELQAAVEVANAYGSYAMSHAYSKVSLLRNLE
AGVKTLEHAFMFDKDVYKAMKKNDAYMTTNMTAFSPYLGEIEAINSNPASARKAKTAQAAFGDYIDNVNKYQPKLGFHVD
CVGGVAACEQQADHSIYLSGKFLGNHYTLLSMTSVNGEIVKLAGEVLDPYFEGKLGVVEEGAYADLLLVDGNPLQDLTVI
GANEKWFDAPKRDGIETMKIIMKDGVIYKNTL

Sequences:

>Translated_272_residues
MSCTADSIGDIKACARQNYMQGATQIKLMSSGGVASSFDPWQLNAYSLEELQAAVEVANAYGSYAMSHAYSKVSLLRNLE
AGVKTLEHAFMFDKDVYKAMKKNDAYMTTNMTAFSPYLGEIEAINSNPASARKAKTAQAAFGDYIDNVNKYQPKLGFHVD
CVGGVAACEQQADHSIYLSGKFLGNHYTLLSMTSVNGEIVKLAGEVLDPYFEGKLGVVEEGAYADLLLVDGNPLQDLTVI
GANEKWFDAPKRDGIETMKIIMKDGVIYKNTL
>Mature_271_residues
SCTADSIGDIKACARQNYMQGATQIKLMSSGGVASSFDPWQLNAYSLEELQAAVEVANAYGSYAMSHAYSKVSLLRNLEA
GVKTLEHAFMFDKDVYKAMKKNDAYMTTNMTAFSPYLGEIEAINSNPASARKAKTAQAAFGDYIDNVNKYQPKLGFHVDC
VGGVAACEQQADHSIYLSGKFLGNHYTLLSMTSVNGEIVKLAGEVLDPYFEGKLGVVEEGAYADLLLVDGNPLQDLTVIG
ANEKWFDAPKRDGIETMKIIMKDGVIYKNTL

Specific function: Unknown

COG id: COG1228

COG function: function code Q; Imidazolonepropionase and related amidohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322248, Length=272, Percent_Identity=28.3088235294118, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29627; Mature: 29496

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCTADSIGDIKACARQNYMQGATQIKLMSSGGVASSFDPWQLNAYSLEELQAAVEVANA
CCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
YGSYAMSHAYSKVSLLRNLEAGVKTLEHAFMFDKDVYKAMKKNDAYMTTNMTAFSPYLGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
IEAINSNPASARKAKTAQAAFGDYIDNVNKYQPKLGFHVDCVGGVAACEQQADHSIYLSG
EEECCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCEEEECCCHHHHHHHCCCCEEEEEE
KFLGNHYTLLSMTSVNGEIVKLAGEVLDPYFEGKLGVVEEGAYADLLLVDGNPLQDLTVI
EEECCEEEEEEEECCCCHHHHHHHHHHCHHHCCCCCEEECCCCEEEEEECCCCCCCEEEE
GANEKWFDAPKRDGIETMKIIMKDGVIYKNTL
ECCCHHCCCCCCCCHHHHHHHHHCCEEEECCC
>Mature Secondary Structure 
SCTADSIGDIKACARQNYMQGATQIKLMSSGGVASSFDPWQLNAYSLEELQAAVEVANA
CCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
YGSYAMSHAYSKVSLLRNLEAGVKTLEHAFMFDKDVYKAMKKNDAYMTTNMTAFSPYLGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
IEAINSNPASARKAKTAQAAFGDYIDNVNKYQPKLGFHVDCVGGVAACEQQADHSIYLSG
EEECCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCEEEECCCHHHHHHHCCCCEEEEEE
KFLGNHYTLLSMTSVNGEIVKLAGEVLDPYFEGKLGVVEEGAYADLLLVDGNPLQDLTVI
EEECCEEEEEEEECCCCHHHHHHHHHHCHHHCCCCCEEECCCCEEEEEECCCCCCCEEEE
GANEKWFDAPKRDGIETMKIIMKDGVIYKNTL
ECCCHHCCCCCCCCHHHHHHHHHCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA