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The map label for this gene is 167625013

Identifier: 167625013

GI number: 167625013

Start: 3783660

End: 3784916

Strand: Reverse

Name: 167625013

Synonym: Shal_3101

Alternate gene names: NA

Gene position: 3784916-3783660 (Counterclockwise)

Preceding gene: 167625014

Following gene: 167625011

Centisome position: 72.41

GC content: 45.74

Gene sequence:

>1257_bases
ATGAATACAATGCGTTTAGCGGTTTTAATCGGAGGGTGTCTTGCTTGTGGCAGCCTGTTTAGCGTTGCTAGCTTTGCCAG
TACCAGTTATGCCAGTACCAGCTTTGGTAGCCCCAATACCGTAGATAACACCATCAAAGACAATACCCGTAAGAAAGAGT
CTTGGCGTGAAAACTTAGCCAGTGAGCATAACCTGACTTTGGGACTGGATTATCAAGTGCTTGGGTTGTCGGCAAGTTCT
CCTACCGAAGGCGGGGACGATAACTCTGCGGCGGGTGTGGCTCGATTTTACGGTTCTTGGAACCTGACAGGGTTAGAGAG
CGGCAATGTAGGTGGATTAGTGTGGAAAGTAGAGCATCGACAGGCTTATACCGATACAGCTCCAAAATCCTATTCATTTA
TTGAGCCTGGGCTTGGCTACATTGGCATGATAGGTCCTACCTATAGCGACCAAGGTGGCCGACTGACCAACCTCTATTGG
AAGCAGCAATTTAATCAGGGTAAAACCGCGCTAATGGCGGGCTACTTAGATACATCTGATTATGTTGATACCTATGCATT
AGCAAGTCCATGGACTGGGTTTACCAATCTAGCATTTAGCACCGGTGCGGGGGCTATAGGCCTGCCTGACGATGGAATTT
TGGGGCTTGCTGTTGGTCATATGCTTGATGAGAACTTTTATATTATTGCCGGGGCTGCTGATGCGAAAGGACGCTCAGAT
AAGCCTTTGGATGGTTTTGAAACCCTGTTTAATGATCATAAGCTGTTTACCACATTTGAGTTTGGCTGGACGGCATCACA
GGAGCATATTTATACCGATAATGTGCACCTGACTCTGTGGCATATCGATGGGGGAACACAGCATAATCTCACCCAACCAA
GTGAAAGTGGTCAAGGGGTTAACTTCTCCGCCAGTTTCTTTGTTACGCCGCAGATTATGCCTTTTATTCGCGGTGGATTT
TCTGAAGGTGATGTGGCGCTATACGATAAATCGTTAACATTGGGTGTGGGTTACTTTGGTTTAGGCGCTGAGAAAAATAA
CTTAGGTTTTGCGATTAACTTCAGCGAAGTGAATGAGAACTTAGGCAAGGCCTATGGCGTTACTGACGACAAGCAATTTA
CTTCAGAGCTCTATTACAACATGAGTCTGGGTGAGTTTGTGCAGTTAACCCCTAATATTCAATATATTGATAACCCCGCT
ATCTCAACAGAAAAAGATACATGGGTGTTTGGTTTGAGGGCGAGAGTGACTTTCTAA

Upstream 100 bases:

>100_bases
CTGATGCGATACCTAGCCCAGCTGCTCAAGATCACCAAGCACATGCTCACTAATTGATTGATACACATGGAATGAAAGGC
GCGTTAACAAGGAAATCTGT

Downstream 100 bases:

>100_bases
CAAGCTTATAGTTAACAAGCTCAAACTTATTCAACCCAAACTAAAAAGGCCTCTAAATAGAGGCCTTTTTTAAATTTTTA
GCGTTCAGATTTCAGAGTTG

Product: carbohydrate-selective porin OprB

Products: NA

Alternate protein names: Carbohydrate-Selective Porin OprB Family

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNTMRLAVLIGGCLACGSLFSVASFASTSYASTSFGSPNTVDNTIKDNTRKKESWRENLASEHNLTLGLDYQVLGLSASS
PTEGGDDNSAAGVARFYGSWNLTGLESGNVGGLVWKVEHRQAYTDTAPKSYSFIEPGLGYIGMIGPTYSDQGGRLTNLYW
KQQFNQGKTALMAGYLDTSDYVDTYALASPWTGFTNLAFSTGAGAIGLPDDGILGLAVGHMLDENFYIIAGAADAKGRSD
KPLDGFETLFNDHKLFTTFEFGWTASQEHIYTDNVHLTLWHIDGGTQHNLTQPSESGQGVNFSASFFVTPQIMPFIRGGF
SEGDVALYDKSLTLGVGYFGLGAEKNNLGFAINFSEVNENLGKAYGVTDDKQFTSELYYNMSLGEFVQLTPNIQYIDNPA
ISTEKDTWVFGLRARVTF

Sequences:

>Translated_418_residues
MNTMRLAVLIGGCLACGSLFSVASFASTSYASTSFGSPNTVDNTIKDNTRKKESWRENLASEHNLTLGLDYQVLGLSASS
PTEGGDDNSAAGVARFYGSWNLTGLESGNVGGLVWKVEHRQAYTDTAPKSYSFIEPGLGYIGMIGPTYSDQGGRLTNLYW
KQQFNQGKTALMAGYLDTSDYVDTYALASPWTGFTNLAFSTGAGAIGLPDDGILGLAVGHMLDENFYIIAGAADAKGRSD
KPLDGFETLFNDHKLFTTFEFGWTASQEHIYTDNVHLTLWHIDGGTQHNLTQPSESGQGVNFSASFFVTPQIMPFIRGGF
SEGDVALYDKSLTLGVGYFGLGAEKNNLGFAINFSEVNENLGKAYGVTDDKQFTSELYYNMSLGEFVQLTPNIQYIDNPA
ISTEKDTWVFGLRARVTF
>Mature_418_residues
MNTMRLAVLIGGCLACGSLFSVASFASTSYASTSFGSPNTVDNTIKDNTRKKESWRENLASEHNLTLGLDYQVLGLSASS
PTEGGDDNSAAGVARFYGSWNLTGLESGNVGGLVWKVEHRQAYTDTAPKSYSFIEPGLGYIGMIGPTYSDQGGRLTNLYW
KQQFNQGKTALMAGYLDTSDYVDTYALASPWTGFTNLAFSTGAGAIGLPDDGILGLAVGHMLDENFYIIAGAADAKGRSD
KPLDGFETLFNDHKLFTTFEFGWTASQEHIYTDNVHLTLWHIDGGTQHNLTQPSESGQGVNFSASFFVTPQIMPFIRGGF
SEGDVALYDKSLTLGVGYFGLGAEKNNLGFAINFSEVNENLGKAYGVTDDKQFTSELYYNMSLGEFVQLTPNIQYIDNPA
ISTEKDTWVFGLRARVTF

Specific function: Unknown

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45383; Mature: 45383

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTMRLAVLIGGCLACGSLFSVASFASTSYASTSFGSPNTVDNTIKDNTRKKESWRENLA
CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHC
SEHNLTLGLDYQVLGLSASSPTEGGDDNSAAGVARFYGSWNLTGLESGNVGGLVWKVEHR
CCCCEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCEEEEEEECC
QAYTDTAPKSYSFIEPGLGYIGMIGPTYSDQGGRLTNLYWKQQFNQGKTALMAGYLDTSD
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEHHHHHCCCCCEEEEEEECCCCH
YVDTYALASPWTGFTNLAFSTGAGAIGLPDDGILGLAVGHMLDENFYIIAGAADAKGRSD
HHHHHECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCC
KPLDGFETLFNDHKLFTTFEFGWTASQEHIYTDNVHLTLWHIDGGTQHNLTQPSESGQGV
CCCHHHHHHHCCCEEEEEEEECCCCCCCEEEECCEEEEEEEECCCCCCCCCCCCCCCCCC
NFSASFFVTPQIMPFIRGGFSEGDVALYDKSLTLGVGYFGLGAEKNNLGFAINFSEVNEN
EEEEEEEECCCHHHHHHCCCCCCCEEEEECEEEEEEEEEECCCCCCCCEEEEEHHHHHHH
LGKAYGVTDDKQFTSELYYNMSLGEFVQLTPNIQYIDNPAISTEKDTWVFGLRARVTF
HHHHCCCCCCHHHHHHHEECCCCCCEEEECCCEEEECCCCCCCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MNTMRLAVLIGGCLACGSLFSVASFASTSYASTSFGSPNTVDNTIKDNTRKKESWRENLA
CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHC
SEHNLTLGLDYQVLGLSASSPTEGGDDNSAAGVARFYGSWNLTGLESGNVGGLVWKVEHR
CCCCEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCEEEEEEECC
QAYTDTAPKSYSFIEPGLGYIGMIGPTYSDQGGRLTNLYWKQQFNQGKTALMAGYLDTSD
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEHHHHHCCCCCEEEEEEECCCCH
YVDTYALASPWTGFTNLAFSTGAGAIGLPDDGILGLAVGHMLDENFYIIAGAADAKGRSD
HHHHHECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCC
KPLDGFETLFNDHKLFTTFEFGWTASQEHIYTDNVHLTLWHIDGGTQHNLTQPSESGQGV
CCCHHHHHHHCCCEEEEEEEECCCCCCCEEEECCEEEEEEEECCCCCCCCCCCCCCCCCC
NFSASFFVTPQIMPFIRGGFSEGDVALYDKSLTLGVGYFGLGAEKNNLGFAINFSEVNEN
EEEEEEEECCCHHHHHHCCCCCCCEEEEECEEEEEEEEEECCCCCCCCEEEEEHHHHHHH
LGKAYGVTDDKQFTSELYYNMSLGEFVQLTPNIQYIDNPAISTEKDTWVFGLRARVTF
HHHHCCCCCCHHHHHHHEECCCCCCEEEECCCEEEECCCCCCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA