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The map label for this gene is ynbC [C]

Identifier: 167624829

GI number: 167624829

Start: 3543905

End: 3544906

Strand: Reverse

Name: ynbC [C]

Synonym: Shal_2915

Alternate gene names: 167624829

Gene position: 3544906-3543905 (Counterclockwise)

Preceding gene: 167624830

Following gene: 167624825

Centisome position: 67.82

GC content: 45.91

Gene sequence:

>1002_bases
GTGGATAAGGTTTTCTTAGATGTTTTAAATTTCATATTCATTTCCGCGGCGATTTATTTCAGCATTGCCTCCATCTGTAT
TGTGTTTGGTAAGCGTAGCAAACGAAGTTCGACCCAAAACAATTTAGCTTTCGATGAGTTGGCTTCTGATAAGTCGGCAA
CCGATTATACAAAGCTGCCACAACTAAAAAGCTATCAAACTAGAGATGGCAAGCGATTGCCCTATCGCCATTATGACGCT
AAATCAGATAAGGTCGTTGTATTTTTGCATGGCTCAGGCTGGCATAGCCAGTATCTGTTTCCTCTGACTGATTTTTTGAG
TTCCGAAGGGCTCGCTCAGGTATATACGCCGGATCTTCGTGGGCATGGACAAGCACCTGAAAGGCGGGGCGATGTCGATT
ATATAGACCAACTGGAAGATGACTTAGCCGATTTCATTGAACTGATTAAAACGGAACATCCTGACTGTAAGCTGATTGTA
GCGGGCCATTCATCGGGAGGCGGGCTGGCGGTGCGCTTTGCGGGAAGTCGATACGGAAAGCGAGTTGATGCTTATGTTTT
ACTTTCTCCCTACCTTAAATATAACGCCCCAATAATGCGGCCAAATTCAGGCGGCTGGGCAGCGCCTCATACACTTAGAA
TCGTTGGGCTGACCATGTTAAATAACATCGGCATCCATCAGTTTGATTATGTAATCGCGATTGATTTCAATATGCCACAA
GAGTTCCGCAATGGGACGGAAACCTTGTCATACACCCATCGCCTCAATACAGCCTTCGCTCCGCGCAACTATAAGCAAGA
TCTCTGTGCGATAACGCAGCCATTATTAGTACTCGTCGGTACCGCGGATGAAGCATTTATTGCCGAACAGTTTGAGCCAG
TGTTTTCACAGTACACAAGCGCTCAGGTAACACTGCTACCCGATGTGACCCATATGGGAGTGGTTGTAAATCCGGCGGTA
AGACCCATTTTGAGGCAGTGGTTTGAAAACTTACACGTATAA

Upstream 100 bases:

>100_bases
GAGGCGTTAGTGATTAAACTGATAAATTCGAATAAGTTTAAGTGCTTTTGCTCATGTAACTACTTAACGTATTGTATCAA
AAAATAAAACTGGAGGGTGG

Downstream 100 bases:

>100_bases
GCTTGTTAGAAAAGGCTAGCGCTTAACCTGCGGTTATCCTAATGATATTTCAATTTTAATGGATAGGATCTGCGTTGCTC
TAACGTGATTCAAGAACTTC

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Lysophospholipase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Fold Family Hydrolase; Lysophospholipase-Like Protein

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MDKVFLDVLNFIFISAAIYFSIASICIVFGKRSKRSSTQNNLAFDELASDKSATDYTKLPQLKSYQTRDGKRLPYRHYDA
KSDKVVVFLHGSGWHSQYLFPLTDFLSSEGLAQVYTPDLRGHGQAPERRGDVDYIDQLEDDLADFIELIKTEHPDCKLIV
AGHSSGGGLAVRFAGSRYGKRVDAYVLLSPYLKYNAPIMRPNSGGWAAPHTLRIVGLTMLNNIGIHQFDYVIAIDFNMPQ
EFRNGTETLSYTHRLNTAFAPRNYKQDLCAITQPLLVLVGTADEAFIAEQFEPVFSQYTSAQVTLLPDVTHMGVVVNPAV
RPILRQWFENLHV

Sequences:

>Translated_333_residues
MDKVFLDVLNFIFISAAIYFSIASICIVFGKRSKRSSTQNNLAFDELASDKSATDYTKLPQLKSYQTRDGKRLPYRHYDA
KSDKVVVFLHGSGWHSQYLFPLTDFLSSEGLAQVYTPDLRGHGQAPERRGDVDYIDQLEDDLADFIELIKTEHPDCKLIV
AGHSSGGGLAVRFAGSRYGKRVDAYVLLSPYLKYNAPIMRPNSGGWAAPHTLRIVGLTMLNNIGIHQFDYVIAIDFNMPQ
EFRNGTETLSYTHRLNTAFAPRNYKQDLCAITQPLLVLVGTADEAFIAEQFEPVFSQYTSAQVTLLPDVTHMGVVVNPAV
RPILRQWFENLHV
>Mature_333_residues
MDKVFLDVLNFIFISAAIYFSIASICIVFGKRSKRSSTQNNLAFDELASDKSATDYTKLPQLKSYQTRDGKRLPYRHYDA
KSDKVVVFLHGSGWHSQYLFPLTDFLSSEGLAQVYTPDLRGHGQAPERRGDVDYIDQLEDDLADFIELIKTEHPDCKLIV
AGHSSGGGLAVRFAGSRYGKRVDAYVLLSPYLKYNAPIMRPNSGGWAAPHTLRIVGLTMLNNIGIHQFDYVIAIDFNMPQ
EFRNGTETLSYTHRLNTAFAPRNYKQDLCAITQPLLVLVGTADEAFIAEQFEPVFSQYTSAQVTLLPDVTHMGVVVNPAV
RPILRQWFENLHV

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37475; Mature: 37475

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKVFLDVLNFIFISAAIYFSIASICIVFGKRSKRSSTQNNLAFDELASDKSATDYTKLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCHHHCC
QLKSYQTRDGKRLPYRHYDAKSDKVVVFLHGSGWHSQYLFPLTDFLSSEGLAQVYTPDLR
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCEEEECCCCC
GHGQAPERRGDVDYIDQLEDDLADFIELIKTEHPDCKLIVAGHSSGGGLAVRFAGSRYGK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCC
RVDAYVLLSPYLKYNAPIMRPNSGGWAAPHTLRIVGLTMLNNIGIHQFDYVIAIDFNMPQ
CEEEEEEECCHHHCCCCEECCCCCCCCCCCEEEEEEHHHHHCCCCEEEEEEEEEECCCCH
EFRNGTETLSYTHRLNTAFAPRNYKQDLCAITQPLLVLVGTADEAFIAEQFEPVFSQYTS
HHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCC
AQVTLLPDVTHMGVVVNPAVRPILRQWFENLHV
CEEEEECCCCCCCEEECHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKVFLDVLNFIFISAAIYFSIASICIVFGKRSKRSSTQNNLAFDELASDKSATDYTKLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCHHHCC
QLKSYQTRDGKRLPYRHYDAKSDKVVVFLHGSGWHSQYLFPLTDFLSSEGLAQVYTPDLR
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCEEEECCCCC
GHGQAPERRGDVDYIDQLEDDLADFIELIKTEHPDCKLIVAGHSSGGGLAVRFAGSRYGK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCC
RVDAYVLLSPYLKYNAPIMRPNSGGWAAPHTLRIVGLTMLNNIGIHQFDYVIAIDFNMPQ
CEEEEEEECCHHHCCCCEECCCCCCCCCCCEEEEEEHHHHHCCCCEEEEEEEEEECCCCH
EFRNGTETLSYTHRLNTAFAPRNYKQDLCAITQPLLVLVGTADEAFIAEQFEPVFSQYTS
HHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCC
AQVTLLPDVTHMGVVVNPAVRPILRQWFENLHV
CEEEEECCCCCCCEEECHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA