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The map label for this gene is yjcS [H]

Identifier: 167624830

GI number: 167624830

Start: 3545109

End: 3547127

Strand: Reverse

Name: yjcS [H]

Synonym: Shal_2916

Alternate gene names: 167624830

Gene position: 3547127-3545109 (Counterclockwise)

Preceding gene: 167624832

Following gene: 167624829

Centisome position: 67.86

GC content: 44.68

Gene sequence:

>2019_bases
ATGAAACAGAGATACAGATTCATCGTATATAGCCTACTATTTTCAAGCGTTACAGTGTCTGCAGAGGAGCATGACCTTTC
AATTAAAGATGTGGGAGGGAAACCAGCTACTCAGCAAACTCAGAAGGCAAACCGAGCCTATGCAGAAACCTTAAACTTCA
CCGATGTTCGGGCCTTTGAAAACAATGACAAGGGGCTCGTTGCTGAGTTTGACCAAAAAACCGGTGACATAATTCATAAT
AGCTTTAAATTTATCGATGAAAACTCAGCAGATGCTGCGCCAGCAACAGTCAATCCATCGCTTTGGAGACAAGCGGTATT
GAATCAGAAGGCCGAAGGTCTTTATGAAGTTTTACCCGGGAAAATATATCAGATCCGTGGGGCAGATCTTGCGTCACTTT
CCTTTATCAGAGGGAAAACAGGTTGGATAGTTTATGACGTGTTGACCACCAAAGAGGCGGCGGCGCAGTCTCTGAAGTTC
TTTCAAGAGAATGTTCCACAAGGCGGCGAACTTCCGGTTGTCGCGATGCTCTACTCCCATTCCCATGCCGATCATTTTGG
TGGTGCTCGCGCTATCCAAGAAGCTTTTCCTAACGTGAAGGTTTATGGCTCTAAAAATATCACTAAGGAAACGGTCGATG
AGAATGTATTAGCGGGTAATGCCATGTCACGTCGTACTGCCTATCAATATGGCGCCACACTGGGTCGTAACGAGCACGGC
ATCGTTGATGCGGCTTTAGCCAAAGGTCTATCTACGGGGCAAATTACCTATGTTACGCCCGATTATGAACTTAATCTAAA
GGCCGATGTGGAGGAGTTAACTATCGATGGCCTAGAGATGGTTTTCCTCGATGCCTCGGGAACCGAAGCACCCTCAGAAA
TGGTGACTTACATACCTTCAATGAAAGCCTTGTGGACCGGTGAGGTCACCTATCAAGGCATGCATAATGTTTACACTTTA
CGCGGTGCTAAAGTACGTGACGCCTTAAAATGGTCTAAGAAAATAAATCAAATGATCAATATGTGGGGAGATGAGGTCGA
GGTACTGTTCGCATCGCACTCGGCACCTATCTGGTCAACACCGGAAATTGTTAATTATTTAAAAATGCAGCGAGATGCTT
ATGGCTTTACTCACAACCAAACCTTGAGACTCGCCAATAATGGTTATGTTTTACAGGATCTGGGTGACAAGATATATGAA
GTGATGCCTGAGAGTATTCAAAAAGCATGGCATACCAATGGTTACCACGGTACCTACTCGCATAATGCGCGCGCGGTTTA
CAATATGTATTTAGGCTATTTTGATATGAATCCGGCCAACTTAAACCCGCTACCGATTAAAGCCGAGTCAGCCAAGTTTG
TAGAGTATATGGGCGGCGCGAAGGCCATTTTAAACAAAGCGAAAGAAGATTTTGCCGATGGTGATTATCGCTTTGTCGCA
ACCGTTCTAAATAAAGTGGTACAAGTTGAGCCTGATAACCTTGAGGCAAGAGCGTTGTTGGCAGATGCCTACGAGCAAAT
GGGCTATCAAGCGGAGGGCGCGGGATGGCGTAACATTTATCTCACCGGTGCACAAGAGTTACGTCTGGGCAAGGTCAGTC
CCGGAGCGCCAAAAACGGCTTCTGCGGATATTCTTTCTGAAATGGATCCTGGAATGTTGCTCGATTATATCGCCGTTCAA
GTCGATGCGTTAAAAGCCCAGCATACGCCATTTACGATGAATATTATCGTTGATGGTGAAGTCTATTTCGTTGAAATGTC
TAATGGCAACTTAAGCAATATTAAAGTTGAGCAAGCTAAAAAGGCTGTCGATGCAACTATCACCTTGAATGACGATGGCT
TTACAAAAATATTATTGGGTCAAGCGCGCCTGTCAGATCTGATTGCATCGAAGGAAGCGACCCTTGAAGGCGATGATACG
GTGTTGAGTAAGTTGGTTAGCACTTTAGTTAAGTTTGATGAGAAGTTTGAGATCGTGCCATTTAGCGACAAAACGGTAGA
TTCAAATTTATATCAGTAA

Upstream 100 bases:

>100_bases
TAGCTTCCGATTCTGCAGAAGGTTGATGGTAATTTATTTTTAGATTTATCGAACGGTGCGCTACAATTTGTTTACATTTA
TGGCGTTGCAGGATGCACTT

Downstream 100 bases:

>100_bases
TTGGAAACTTATGGGTTAAACGGTACCTTAAAACAAGAGTGTCGTTTTTTTAATCCTCTAGCAAGCCTCAAATATTGCTG
TAGTAAAGCCGTGCCAGTGT

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 672; Mature: 672

Protein sequence:

>672_residues
MKQRYRFIVYSLLFSSVTVSAEEHDLSIKDVGGKPATQQTQKANRAYAETLNFTDVRAFENNDKGLVAEFDQKTGDIIHN
SFKFIDENSADAAPATVNPSLWRQAVLNQKAEGLYEVLPGKIYQIRGADLASLSFIRGKTGWIVYDVLTTKEAAAQSLKF
FQENVPQGGELPVVAMLYSHSHADHFGGARAIQEAFPNVKVYGSKNITKETVDENVLAGNAMSRRTAYQYGATLGRNEHG
IVDAALAKGLSTGQITYVTPDYELNLKADVEELTIDGLEMVFLDASGTEAPSEMVTYIPSMKALWTGEVTYQGMHNVYTL
RGAKVRDALKWSKKINQMINMWGDEVEVLFASHSAPIWSTPEIVNYLKMQRDAYGFTHNQTLRLANNGYVLQDLGDKIYE
VMPESIQKAWHTNGYHGTYSHNARAVYNMYLGYFDMNPANLNPLPIKAESAKFVEYMGGAKAILNKAKEDFADGDYRFVA
TVLNKVVQVEPDNLEARALLADAYEQMGYQAEGAGWRNIYLTGAQELRLGKVSPGAPKTASADILSEMDPGMLLDYIAVQ
VDALKAQHTPFTMNIIVDGEVYFVEMSNGNLSNIKVEQAKKAVDATITLNDDGFTKILLGQARLSDLIASKEATLEGDDT
VLSKLVSTLVKFDEKFEIVPFSDKTVDSNLYQ

Sequences:

>Translated_672_residues
MKQRYRFIVYSLLFSSVTVSAEEHDLSIKDVGGKPATQQTQKANRAYAETLNFTDVRAFENNDKGLVAEFDQKTGDIIHN
SFKFIDENSADAAPATVNPSLWRQAVLNQKAEGLYEVLPGKIYQIRGADLASLSFIRGKTGWIVYDVLTTKEAAAQSLKF
FQENVPQGGELPVVAMLYSHSHADHFGGARAIQEAFPNVKVYGSKNITKETVDENVLAGNAMSRRTAYQYGATLGRNEHG
IVDAALAKGLSTGQITYVTPDYELNLKADVEELTIDGLEMVFLDASGTEAPSEMVTYIPSMKALWTGEVTYQGMHNVYTL
RGAKVRDALKWSKKINQMINMWGDEVEVLFASHSAPIWSTPEIVNYLKMQRDAYGFTHNQTLRLANNGYVLQDLGDKIYE
VMPESIQKAWHTNGYHGTYSHNARAVYNMYLGYFDMNPANLNPLPIKAESAKFVEYMGGAKAILNKAKEDFADGDYRFVA
TVLNKVVQVEPDNLEARALLADAYEQMGYQAEGAGWRNIYLTGAQELRLGKVSPGAPKTASADILSEMDPGMLLDYIAVQ
VDALKAQHTPFTMNIIVDGEVYFVEMSNGNLSNIKVEQAKKAVDATITLNDDGFTKILLGQARLSDLIASKEATLEGDDT
VLSKLVSTLVKFDEKFEIVPFSDKTVDSNLYQ
>Mature_672_residues
MKQRYRFIVYSLLFSSVTVSAEEHDLSIKDVGGKPATQQTQKANRAYAETLNFTDVRAFENNDKGLVAEFDQKTGDIIHN
SFKFIDENSADAAPATVNPSLWRQAVLNQKAEGLYEVLPGKIYQIRGADLASLSFIRGKTGWIVYDVLTTKEAAAQSLKF
FQENVPQGGELPVVAMLYSHSHADHFGGARAIQEAFPNVKVYGSKNITKETVDENVLAGNAMSRRTAYQYGATLGRNEHG
IVDAALAKGLSTGQITYVTPDYELNLKADVEELTIDGLEMVFLDASGTEAPSEMVTYIPSMKALWTGEVTYQGMHNVYTL
RGAKVRDALKWSKKINQMINMWGDEVEVLFASHSAPIWSTPEIVNYLKMQRDAYGFTHNQTLRLANNGYVLQDLGDKIYE
VMPESIQKAWHTNGYHGTYSHNARAVYNMYLGYFDMNPANLNPLPIKAESAKFVEYMGGAKAILNKAKEDFADGDYRFVA
TVLNKVVQVEPDNLEARALLADAYEQMGYQAEGAGWRNIYLTGAQELRLGKVSPGAPKTASADILSEMDPGMLLDYIAVQ
VDALKAQHTPFTMNIIVDGEVYFVEMSNGNLSNIKVEQAKKAVDATITLNDDGFTKILLGQARLSDLIASKEATLEGDDT
VLSKLVSTLVKFDEKFEIVPFSDKTVDSNLYQ

Specific function: Unknown

COG id: COG2015

COG function: function code Q; Alkyl sulfatase and related hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082368, Length=645, Percent_Identity=39.3798449612403, Blast_Score=447, Evalue=1e-126,
Organism=Saccharomyces cerevisiae, GI6324409, Length=641, Percent_Identity=39.9375975039002, Blast_Score=450, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR003033 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 74440; Mature: 74440

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRYRFIVYSLLFSSVTVSAEEHDLSIKDVGGKPATQQTQKANRAYAETLNFTDVRAFE
CCCHHHHHHHHHHHHHHEEECHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
NNDKGLVAEFDQKTGDIIHNSFKFIDENSADAAPATVNPSLWRQAVLNQKAEGLYEVLPG
CCCCCEEEECCCCCHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCC
KIYQIRGADLASLSFIRGKTGWIVYDVLTTKEAAAQSLKFFQENVPQGGELPVVAMLYSH
CEEEECCCCCHHHHEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
SHADHFGGARAIQEAFPNVKVYGSKNITKETVDENVLAGNAMSRRTAYQYGATLGRNEHG
CCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHCCHHHCCCCHHHHHHHHHCCCCCCCCCC
IVDAALAKGLSTGQITYVTPDYELNLKADVEELTIDGLEMVFLDASGTEAPSEMVTYIPS
CCHHHHHCCCCCCEEEEECCCEEEEEECCHHHHEECCEEEEEEECCCCCCHHHHHHHCCC
MKALWTGEVTYQGMHNVYTLRGAKVRDALKWSKKINQMINMWGDEVEVLFASHSAPIWST
CCEEEECCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
PEIVNYLKMQRDAYGFTHNQTLRLANNGYVLQDLGDKIYEVMPESIQKAWHTNGYHGTYS
HHHHHHHHHHHHHCCCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
HNARAVYNMYLGYFDMNPANLNPLPIKAESAKFVEYMGGAKAILNKAKEDFADGDYRFVA
CCCEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHH
TVLNKVVQVEPDNLEARALLADAYEQMGYQAEGAGWRNIYLTGAQELRLGKVSPGAPKTA
HHHHHHEECCCCCCHHHHHHHHHHHHCCCEECCCCCEEEEEECCCCEEECCCCCCCCCCC
SADILSEMDPGMLLDYIAVQVDALKAQHTPFTMNIIVDGEVYFVEMSNGNLSNIKVEQAK
CHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCEEEHHHHH
KAVDATITLNDDGFTKILLGQARLSDLIASKEATLEGDDTVLSKLVSTLVKFDEKFEIVP
HCEEEEEEECCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
FSDKTVDSNLYQ
CCCCCCCCCCCC
>Mature Secondary Structure
MKQRYRFIVYSLLFSSVTVSAEEHDLSIKDVGGKPATQQTQKANRAYAETLNFTDVRAFE
CCCHHHHHHHHHHHHHHEEECHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
NNDKGLVAEFDQKTGDIIHNSFKFIDENSADAAPATVNPSLWRQAVLNQKAEGLYEVLPG
CCCCCEEEECCCCCHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCC
KIYQIRGADLASLSFIRGKTGWIVYDVLTTKEAAAQSLKFFQENVPQGGELPVVAMLYSH
CEEEECCCCCHHHHEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
SHADHFGGARAIQEAFPNVKVYGSKNITKETVDENVLAGNAMSRRTAYQYGATLGRNEHG
CCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHCCHHHCCCCHHHHHHHHHCCCCCCCCCC
IVDAALAKGLSTGQITYVTPDYELNLKADVEELTIDGLEMVFLDASGTEAPSEMVTYIPS
CCHHHHHCCCCCCEEEEECCCEEEEEECCHHHHEECCEEEEEEECCCCCCHHHHHHHCCC
MKALWTGEVTYQGMHNVYTLRGAKVRDALKWSKKINQMINMWGDEVEVLFASHSAPIWST
CCEEEECCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
PEIVNYLKMQRDAYGFTHNQTLRLANNGYVLQDLGDKIYEVMPESIQKAWHTNGYHGTYS
HHHHHHHHHHHHHCCCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
HNARAVYNMYLGYFDMNPANLNPLPIKAESAKFVEYMGGAKAILNKAKEDFADGDYRFVA
CCCEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHH
TVLNKVVQVEPDNLEARALLADAYEQMGYQAEGAGWRNIYLTGAQELRLGKVSPGAPKTA
HHHHHHEECCCCCCHHHHHHHHHHHHCCCEECCCCCEEEEEECCCCEEECCCCCCCCCCC
SADILSEMDPGMLLDYIAVQVDALKAQHTPFTMNIIVDGEVYFVEMSNGNLSNIKVEQAK
CHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCEEEHHHHH
KAVDATITLNDDGFTKILLGQARLSDLIASKEATLEGDDTVLSKLVSTLVKFDEKFEIVP
HCEEEEEEECCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
FSDKTVDSNLYQ
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]