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The map label for this gene is ybaY [C]

Identifier: 167624799

GI number: 167624799

Start: 3507588

End: 3507989

Strand: Reverse

Name: ybaY [C]

Synonym: Shal_2885

Alternate gene names: 167624799

Gene position: 3507989-3507588 (Counterclockwise)

Preceding gene: 167624801

Following gene: 167624798

Centisome position: 67.11

GC content: 45.27

Gene sequence:

>402_bases
ATGAAACAGTGGTTTAAGCCTTTATTACCTTTAGCGGTAGCAGCAAGCATGTTGACTGGTTGTGCAACATCCAATGCTGT
GGTGGAGATCCATGGTGAGGTTTGGTACAAGGAGCGAATCGCGCTACCCGAAGACGCGGTGATCAGCGTTCAGGTTCAAG
ATGTGTCGCGAATGGATGCACCTGCTGAAGTGATTGCAGAGTTTGAGCGTAATGATGTCAGTACCCCAATCCCATTCCAG
TTTTTAATTAATAGAGATCAATTTGAAGATGGCCACACCTACAACATAGGTGCACGTATCACGCTAGATGATAAATTGAT
GTTTATTAATACCCAGGCTTACCGAATCGATCTGGACTCGAGTGAGCCAATGTCTGTATTAGTACAGAGGGTGGCACGTT
AA

Upstream 100 bases:

>100_bases
TCGGTGGATAGTTAACAGACTTTTTCGATTAACTGATATAAAATTTAAGTACGGACATATAGACTTCCAGATGTCTTAAT
GTATTATTAGGAGCGTAAAT

Downstream 100 bases:

>100_bases
CTAAATTAGCTGTGAGTTAGTCTAGCTGGCGCGTCTCTTTCTGATAGGTTACATAATTAGAATAAAGAGGCGCGTTATGC
CGGTTAAAATCCCCGATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein-Like Protein; Lipoprotein-Related Protein

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKQWFKPLLPLAVAASMLTGCATSNAVVEIHGEVWYKERIALPEDAVISVQVQDVSRMDAPAEVIAEFERNDVSTPIPFQ
FLINRDQFEDGHTYNIGARITLDDKLMFINTQAYRIDLDSSEPMSVLVQRVAR

Sequences:

>Translated_133_residues
MKQWFKPLLPLAVAASMLTGCATSNAVVEIHGEVWYKERIALPEDAVISVQVQDVSRMDAPAEVIAEFERNDVSTPIPFQ
FLINRDQFEDGHTYNIGARITLDDKLMFINTQAYRIDLDSSEPMSVLVQRVAR
>Mature_133_residues
MKQWFKPLLPLAVAASMLTGCATSNAVVEIHGEVWYKERIALPEDAVISVQVQDVSRMDAPAEVIAEFERNDVSTPIPFQ
FLINRDQFEDGHTYNIGARITLDDKLMFINTQAYRIDLDSSEPMSVLVQRVAR

Specific function: Unknown

COG id: COG3126

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15026; Mature: 15026

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQWFKPLLPLAVAASMLTGCATSNAVVEIHGEVWYKERIALPEDAVISVQVQDVSRMDA
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCCCCEEEEEECCCCCCCC
PAEVIAEFERNDVSTPIPFQFLINRDQFEDGHTYNIGARITLDDKLMFINTQAYRIDLDS
CHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEECCEEEEECCEEEEEECEEEEEECCC
SEPMSVLVQRVAR
CCCHHHHHHHHCC
>Mature Secondary Structure
MKQWFKPLLPLAVAASMLTGCATSNAVVEIHGEVWYKERIALPEDAVISVQVQDVSRMDA
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCCCCEEEEEECCCCCCCC
PAEVIAEFERNDVSTPIPFQFLINRDQFEDGHTYNIGARITLDDKLMFINTQAYRIDLDS
CHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEECCEEEEECCEEEEEECEEEEEECCC
SEPMSVLVQRVAR
CCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA