Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is metA [H]

Identifier: 167624798

GI number: 167624798

Start: 3506573

End: 3507511

Strand: Reverse

Name: metA [H]

Synonym: Shal_2884

Alternate gene names: 167624798

Gene position: 3507511-3506573 (Counterclockwise)

Preceding gene: 167624799

Following gene: 167624792

Centisome position: 67.1

GC content: 46.75

Gene sequence:

>939_bases
ATGCCGGTTAAAATCCCCGATGATCTGCCCGCTGCAGAGATCCTGGAGTCAGAGAATATCTTTGTCATGTCCGAGACTCG
GGCGGCGAATCAAGATATTCGTCCAATGAAGGTATTAATCCTTAATTTAATGCCCAATAAGATTGAGACCGAAACCCAAC
TGCTACGCCTCTTAGGTAATACCCCTCTGCAAGTCGATGTGGATCTGCTACGAATTCACGATAAAGCTTCAAAGCATACC
TCTATTGATCATATGAACAATTTCTATCGAGATTTTGAGCAGGTACGGCAGAAAAACTATGACGGTTTAATTATTACTGG
CGCGCCGCTTGGGCAGATAGAGTTTGAAGAGGTGTTATACTGGGATCATATCCGTGAAATCATCGATTGGTCACAGCAGC
ATGTCACCTCGGTGCTCTTCCTATGTTGGGCGGCTCATGCGGCGCTGTATCATCTATTCGGTCTAAACCGATCACTGCTG
ACAACTAAGCGCTCAGGGGTGTTTACCCATAAGCGCACCTCTGAGCACTATCCCTTGTTGCGTGGCTTCGATGATGAATT
TTTTGCACCGCATTCGCGTTTTGCCGAGATGGATATCGATAAGCTAAAGGCGCACCCAGAGCTTCAGGTGTTGACCGAGT
CAGAGACAGCAGGTGCCTATATGGTGCTCTGCAAAAACAATCGTAACCTGTTTGTGATGGGGCATCCCGAGTATCAAAAA
TCGACCTTAAAAGATGAGTATTACCGCGATCTTGAGCAAGGTTTAGCGCCTGAAGTGCCGCAAAATTACTTTACCAACAA
TGATCCACTGCAAGCGCCCATTGCCCGTTGGCACAGTCATGGCAGTCTACTGGTGAGTAATTGGCTTAACTATTATGTCT
ACCAGCTGACGCCATATAATCTCGATGATATGACGGGGATAACCCCTTGGGGAACATAA

Upstream 100 bases:

>100_bases
TTAGTACAGAGGGTGGCACGTTAACTAAATTAGCTGTGAGTTAGTCTAGCTGGCGCGTCTCTTTCTGATAGGTTACATAA
TTAGAATAAAGAGGCGCGTT

Downstream 100 bases:

>100_bases
TAACCAGTGGAGTAAATCGCTGTTAGTTGCATAAAATGCCAGAATACTCTAATGAGTACTGGCATTTTATGTACCTTTAT
TTGTAGAGACTCATCGATAG

Product: homoserine O-succinyltransferase

Products: NA

Alternate protein names: Homoserine O-transsuccinylase; HTS [H]

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MPVKIPDDLPAAEILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGNTPLQVDVDLLRIHDKASKHT
SIDHMNNFYRDFEQVRQKNYDGLIITGAPLGQIEFEEVLYWDHIREIIDWSQQHVTSVLFLCWAAHAALYHLFGLNRSLL
TTKRSGVFTHKRTSEHYPLLRGFDDEFFAPHSRFAEMDIDKLKAHPELQVLTESETAGAYMVLCKNNRNLFVMGHPEYQK
STLKDEYYRDLEQGLAPEVPQNYFTNNDPLQAPIARWHSHGSLLVSNWLNYYVYQLTPYNLDDMTGITPWGT

Sequences:

>Translated_312_residues
MPVKIPDDLPAAEILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGNTPLQVDVDLLRIHDKASKHT
SIDHMNNFYRDFEQVRQKNYDGLIITGAPLGQIEFEEVLYWDHIREIIDWSQQHVTSVLFLCWAAHAALYHLFGLNRSLL
TTKRSGVFTHKRTSEHYPLLRGFDDEFFAPHSRFAEMDIDKLKAHPELQVLTESETAGAYMVLCKNNRNLFVMGHPEYQK
STLKDEYYRDLEQGLAPEVPQNYFTNNDPLQAPIARWHSHGSLLVSNWLNYYVYQLTPYNLDDMTGITPWGT
>Mature_311_residues
PVKIPDDLPAAEILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGNTPLQVDVDLLRIHDKASKHTS
IDHMNNFYRDFEQVRQKNYDGLIITGAPLGQIEFEEVLYWDHIREIIDWSQQHVTSVLFLCWAAHAALYHLFGLNRSLLT
TKRSGVFTHKRTSEHYPLLRGFDDEFFAPHSRFAEMDIDKLKAHPELQVLTESETAGAYMVLCKNNRNLFVMGHPEYQKS
TLKDEYYRDLEQGLAPEVPQNYFTNNDPLQAPIARWHSHGSLLVSNWLNYYVYQLTPYNLDDMTGITPWGT

Specific function: Methionine biosynthesis; HTS variant; first step. [C]

COG id: COG1897

COG function: function code E; Homoserine trans-succinylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HTS family [H]

Homologues:

Organism=Escherichia coli, GI1790443, Length=304, Percent_Identity=53.9473684210526, Blast_Score=363, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005697
- ProDom:   PD037892 [H]

Pfam domain/function: PF04204 HTS [H]

EC number: =2.3.1.46 [H]

Molecular weight: Translated: 36220; Mature: 36088

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVKIPDDLPAAEILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGN
CCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCC
TPLQVDVDLLRIHDKASKHTSIDHMNNFYRDFEQVRQKNYDGLIITGAPLGQIEFEEVLY
CCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH
WDHIREIIDWSQQHVTSVLFLCWAAHAALYHLFGLNRSLLTTKRSGVFTHKRTSEHYPLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCCCCCHH
RGFDDEFFAPHSRFAEMDIDKLKAHPELQVLTESETAGAYMVLCKNNRNLFVMGHPEYQK
CCCCHHHCCCCHHHHHCCHHHHCCCCCEEEEECCCCCCEEEEEEECCCEEEEEECCHHHH
STLKDEYYRDLEQGLAPEVPQNYFTNNDPLQAPIARWHSHGSLLVSNWLNYYVYQLTPYN
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHCCCCHHHHHHHCEEEEEECCCC
LDDMTGITPWGT
CCCCCCCCCCCC
>Mature Secondary Structure 
PVKIPDDLPAAEILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGN
CCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCC
TPLQVDVDLLRIHDKASKHTSIDHMNNFYRDFEQVRQKNYDGLIITGAPLGQIEFEEVLY
CCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH
WDHIREIIDWSQQHVTSVLFLCWAAHAALYHLFGLNRSLLTTKRSGVFTHKRTSEHYPLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCCCCCHH
RGFDDEFFAPHSRFAEMDIDKLKAHPELQVLTESETAGAYMVLCKNNRNLFVMGHPEYQK
CCCCHHHCCCCHHHHHCCHHHHCCCCCEEEEECCCCCCEEEEEEECCCEEEEEECCHHHH
STLKDEYYRDLEQGLAPEVPQNYFTNNDPLQAPIARWHSHGSLLVSNWLNYYVYQLTPYN
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHCCCCHHHHHHHCEEEEEECCCC
LDDMTGITPWGT
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA