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The map label for this gene is cvpA [H]

Identifier: 167624558

GI number: 167624558

Start: 3199721

End: 3200209

Strand: Reverse

Name: cvpA [H]

Synonym: Shal_2638

Alternate gene names: 167624558

Gene position: 3200209-3199721 (Counterclockwise)

Preceding gene: 167624559

Following gene: 167624557

Centisome position: 61.23

GC content: 43.56

Gene sequence:

>489_bases
ATGGTTTGGATCGATTACGCCATCATTATTGTTATCGGACTATCAACTCTGATTAGTTTGGTCCGTGGTTTTGTAAAAGA
GGCCATGTCTCTTGTCGTTTGGTTTGCTGCTTTTTTTATTGCCAGCCAGTTTTACCTCAAACTCGCTACGCATCTGACTC
AGATGCAAGATGAATTGGTTCGAAATGGAGTGGCGATAGCCATCTTATTCGTATCAACGCTGATCCTTGGCGCACTCGTT
AACTACTTAATCGGTCAATTGGTTTCTAAAACCGGATTATCAGGCACCGATAGAGTGCTCGGCTTATGTTTTGGTGCGCT
AAGAGGCGCATTAATCGTGAGCGCGTTACTGTTTTTTATGGATGCTTTTACCGGAGCACCCAACACAGATTGGTGGCAAG
ATTCTACACTCGTGCCCGAATTTGGAGTTGTGATCCAGTGGTTCTTTGACTACGTGGAAAATACCTCAAGCTTTGTACCC
AAAATATAA

Upstream 100 bases:

>100_bases
TTTGTCTGAGAAAAAGTTATTTCGCCGCGAAAGCGTGAGAAATAACTCTGTCTCTGATAGAATCGCGCCGTCTTAAACCC
TATGCTGGATAACCTCTTAA

Downstream 100 bases:

>100_bases
AATGCACTAAAGCATTACTTGGTTTTAGGTGAGTATTTGTATTCACCTAAAGCAAAAATATTAAATAATAGAACATCTTA
CAATGAGGAAGCTTACCCAT

Product: colicin V production protein

Products: NA

Alternate protein names: Protein dedE; Pur regulon 18 kDa protein [H]

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MVWIDYAIIIVIGLSTLISLVRGFVKEAMSLVVWFAAFFIASQFYLKLATHLTQMQDELVRNGVAIAILFVSTLILGALV
NYLIGQLVSKTGLSGTDRVLGLCFGALRGALIVSALLFFMDAFTGAPNTDWWQDSTLVPEFGVVIQWFFDYVENTSSFVP
KI

Sequences:

>Translated_162_residues
MVWIDYAIIIVIGLSTLISLVRGFVKEAMSLVVWFAAFFIASQFYLKLATHLTQMQDELVRNGVAIAILFVSTLILGALV
NYLIGQLVSKTGLSGTDRVLGLCFGALRGALIVSALLFFMDAFTGAPNTDWWQDSTLVPEFGVVIQWFFDYVENTSSFVP
KI
>Mature_162_residues
MVWIDYAIIIVIGLSTLISLVRGFVKEAMSLVVWFAAFFIASQFYLKLATHLTQMQDELVRNGVAIAILFVSTLILGALV
NYLIGQLVSKTGLSGTDRVLGLCFGALRGALIVSALLFFMDAFTGAPNTDWWQDSTLVPEFGVVIQWFFDYVENTSSFVP
KI

Specific function: Required for colicin V production from plasmid IncFI ColV3-K30 [H]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788652, Length=161, Percent_Identity=62.7329192546584, Blast_Score=219, Evalue=6e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 17910; Mature: 17910

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWIDYAIIIVIGLSTLISLVRGFVKEAMSLVVWFAAFFIASQFYLKLATHLTQMQDELV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNGVAIAILFVSTLILGALVNYLIGQLVSKTGLSGTDRVLGLCFGALRGALIVSALLFFM
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DAFTGAPNTDWWQDSTLVPEFGVVIQWFFDYVENTSSFVPKI
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVWIDYAIIIVIGLSTLISLVRGFVKEAMSLVVWFAAFFIASQFYLKLATHLTQMQDELV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNGVAIAILFVSTLILGALVNYLIGQLVSKTGLSGTDRVLGLCFGALRGALIVSALLFFM
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DAFTGAPNTDWWQDSTLVPEFGVVIQWFFDYVENTSSFVPKI
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040734; 2991286; 9205837; 9278503; 2542219 [H]