Click here to switch to the map view.

The map label for this gene is dedD [H]

Identifier: 167624559

GI number: 167624559

Start: 3200325

End: 3200954

Strand: Reverse

Name: dedD [H]

Synonym: Shal_2639

Alternate gene names: 167624559

Gene position: 3200954-3200325 (Counterclockwise)

Preceding gene: 167624560

Following gene: 167624558

Centisome position: 61.24

GC content: 46.98

Gene sequence:

>630_bases
TTGTCTAGTCAATTTCAAAACCGTCTTGTCGGTGTCATCGTTATTGTGGCATTAGGGGTTATATTTTTACCCGATATTTT
GGATGGTAAAAAACAGCGCGAAGAAGAACAGTTTGCTGAAATTCCCATTAGACCCGAGATCCAACAAAGCGAGCTGCCTG
AGCAAAATATCGAAACGGTCGATCTAGGCGCTGATGGTAATTCGTTAGCTGACGGCTCTCAATCGGCTGAAGGCTCTAAA
TCCGCTGATGGTTCCCAATCCGGTGACGACTCTTGGCATATAGCCGAAGAGGGCGGCCAGAGCCAAAAGTCGGAGGCGAA
ACCCGCCAATACGCAAGTGAACAAGTTTGCACCAGAGCCTACAAAGCCAGCCGCTAAACCTAAAGCGGCCTGGACGATTC
AGTTGGGTAGTTTTAACAATGCGGCCAACGTCAAAGGCTTGGTCAAACGCCTTCGTGAAAAAGGTTTTACCGCTTATACC
TTGCCGACTAAACCCGTCGATGGACAATTAACCAAAGTGTTTGTCGGCCCTAATGTGTCTAAAGATAAGCTGAGTGGTAT
GCAGCGTGATATCGAGAAGTTGACACAGCTAAAAGGCCGAGTGGTTGTATATAACCCCGTAGAAAAATAA

Upstream 100 bases:

>100_bases
CATGCGCTTCGAGCGCAATTGCAGCCTGATGATGTGGTAATTGTATTTGGCTCATTTTACACTGTTGCAGGTTTTAAAGA
TTTGTTTAAGGGAGAGAGTC

Downstream 100 bases:

>100_bases
TTAATCGTGATTGTCTTTGTCTGAGAAAAAGTTATTTCGCCGCGAAAGCGTGAGAAATAACTCTGTCTCTGATAGAATCG
CGCCGTCTTAAACCCTATGC

Product: sporulation domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSSQFQNRLVGVIVIVALGVIFLPDILDGKKQREEEQFAEIPIRPEIQQSELPEQNIETVDLGADGNSLADGSQSAEGSK
SADGSQSGDDSWHIAEEGGQSQKSEAKPANTQVNKFAPEPTKPAAKPKAAWTIQLGSFNNAANVKGLVKRLREKGFTAYT
LPTKPVDGQLTKVFVGPNVSKDKLSGMQRDIEKLTQLKGRVVVYNPVEK

Sequences:

>Translated_209_residues
MSSQFQNRLVGVIVIVALGVIFLPDILDGKKQREEEQFAEIPIRPEIQQSELPEQNIETVDLGADGNSLADGSQSAEGSK
SADGSQSGDDSWHIAEEGGQSQKSEAKPANTQVNKFAPEPTKPAAKPKAAWTIQLGSFNNAANVKGLVKRLREKGFTAYT
LPTKPVDGQLTKVFVGPNVSKDKLSGMQRDIEKLTQLKGRVVVYNPVEK
>Mature_208_residues
SSQFQNRLVGVIVIVALGVIFLPDILDGKKQREEEQFAEIPIRPEIQQSELPEQNIETVDLGADGNSLADGSQSAEGSKS
ADGSQSGDDSWHIAEEGGQSQKSEAKPANTQVNKFAPEPTKPAAKPKAAWTIQLGSFNNAANVKGLVKRLREKGFTAYTL
PTKPVDGQLTKVFVGPNVSKDKLSGMQRDIEKLTQLKGRVVVYNPVEK

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082083, Length=222, Percent_Identity=33.3333333333333, Blast_Score=113, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007730 [H]

Pfam domain/function: PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 22627; Mature: 22496

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQFQNRLVGVIVIVALGVIFLPDILDGKKQREEEQFAEIPIRPEIQQSELPEQNIETV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCEE
DLGADGNSLADGSQSAEGSKSADGSQSGDDSWHIAEEGGQSQKSEAKPANTQVNKFAPEP
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHCCCCCCCCHHHCCCCC
TKPAAKPKAAWTIQLGSFNNAANVKGLVKRLREKGFTAYTLPTKPVDGQLTKVFVGPNVS
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCC
KDKLSGMQRDIEKLTQLKGRVVVYNPVEK
HHHHHHHHHHHHHHHHHCCCEEEECCCCC
>Mature Secondary Structure 
SSQFQNRLVGVIVIVALGVIFLPDILDGKKQREEEQFAEIPIRPEIQQSELPEQNIETV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCEE
DLGADGNSLADGSQSAEGSKSADGSQSGDDSWHIAEEGGQSQKSEAKPANTQVNKFAPEP
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHCCCCCCCCHHHCCCCC
TKPAAKPKAAWTIQLGSFNNAANVKGLVKRLREKGFTAYTLPTKPVDGQLTKVFVGPNVS
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCC
KDKLSGMQRDIEKLTQLKGRVVVYNPVEK
HHHHHHHHHHHHHHHHHCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3040734; 9205837; 9278503 [H]