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The map label for this gene is yfcC [H]

Identifier: 167624507

GI number: 167624507

Start: 3135155

End: 3136699

Strand: Reverse

Name: yfcC [H]

Synonym: Shal_2586

Alternate gene names: 167624507

Gene position: 3136699-3135155 (Counterclockwise)

Preceding gene: 167624508

Following gene: 167624503

Centisome position: 60.01

GC content: 48.09

Gene sequence:

>1545_bases
ATGGACCCTGTTAGCGCTTCTAATACCCTAGATAATCAGTTGGTTACTCCGAAAACAACCGTGAGAATGCCCGACACCCT
CGTCATTATCTTCTTCGTTGCCATTGCGGCGGCAATTCTGACTTATTTTGTTCCTATTGGCTCATTTCAAACTCAAGACA
TTAGCTACGTTGTTGATGGTGTGGAAAAGAGCCGCAGCGTTATCGATCCCAACTCCTTTGCCTATGAAGTCGATGATGCA
GGCTCACCCATATTAAACCCTGTCGCACTATTTGAAGGCAACGGCGGGGCGGGCTTCTTTAACTTTGCCTTTGAAGGCTT
AGTCTCGGGCTCTAAGTGGGGTAGTGCTATTGGTGTGATCATGTTCATGTTAGTTATTGGCGGTGCTTTTGGCATCGTGA
TGGCGACAGGTACCATAGATAACGGCATTTTAAAGCTAATTGATCGCACCCGTGGTAATGAGGCGCTGTTTATTCCAGTA
ATTTTCATACTCTTTTCCCTTGGTGGTGCAGTCTTTGGCATGGGGGAGGAGGCGATTGCGTTTGCCATTATCATCTGCCC
GCTGATGATCCGCTTAGGCTATGATGGTATTACCACAGTGATGGTGACCTATGTAGCGACTCAAATTGGTTTCGCTTCCT
CTTGGATGAACCCATTTAGCGTGGCTATCGCCCAAGGTATCGCCGGTGTACCAGTGTTGTCCGGCTCAGGTATGCGCTTT
GTGATGTGGTCCGGTTTTACCCTGATGGGACTTATCTTCACCATGCGTTATGCCGCCAAAGTGAAAGCCATGCCTACGCA
CTCTTTTAGTTACCAAAGTGATAGCTACTTTAGAGAAAACCTTAAAGAATCCAACCTTGAAAGCCGCTTTAACCTAGGCG
ATATCTTGGTATTGCTCACTATATTCGCAACGGTTGCGTGGATCATCTGGGGGGTGATTGCCAAGGCGTGGTTTATCCCA
GAGATTGCCAGTCAGTTCTTCACCATGGGGATTGTTGTCGGCATTATCGGTGTCGTCTTTAAGCTCAACAAGATGAATAT
CAATACCGTAGCGGTGAGCTTTAAGCAGGGCGCTGCCACTATGCTTGAACCCGCTGTTTTAGTCGGCTGTGCCTCGGGTA
TTTTGCTGCTGCTCGGTGGCGGAGATGCTTCAACCCCAAGTGTACTCAATACCATATTGAGTAAAGCGGGGGAGTTTATT
GGCCAACTTCCGAGCGTGATGTCGGCATGGTTTATGTATGTGTTCCAATCGGTGTTTAATTTCTTTGTTACCTCGGGTTC
GGGACAGGCTGCGCTCACCATGCCACTCATGGCTCCTCTTGCTGACTTGGTTGGAGTCACTCGTCAGGTGGCAGTGTTAG
CATTTCAATTGGGCGATGGATTTACCAATATATTGGTACCAACATCGGCATCCTTGATGGCGACATTAGGTGTGTGCCGT
GTCGACTGGGGTCAGTGGCTTAAGTTTATCTGGCGTTTTATGCTGACACTATTTGTGACCTCGAGTGTGATTGTGATTGG
CGCGCACTATATGGGATTTAGCTAG

Upstream 100 bases:

>100_bases
GAGCTCTATCGCAAGTGGTTAAGGTAGATGGTTAACTTGGCTAGCTAATAGTCAGTCATTGGTTTATATTGCCGCCATAT
AATAATAAAATGGTGGCAAA

Downstream 100 bases:

>100_bases
GGCTGGAACCGCTGATAAAAAACGGCATCCTAGGATGCCGTTTTAGTGTGGAGTAAACTAATATCAGTTCTTATTTAGAA
CTTCACTTCACCTTCAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MDPVSASNTLDNQLVTPKTTVRMPDTLVIIFFVAIAAAILTYFVPIGSFQTQDISYVVDGVEKSRSVIDPNSFAYEVDDA
GSPILNPVALFEGNGGAGFFNFAFEGLVSGSKWGSAIGVIMFMLVIGGAFGIVMATGTIDNGILKLIDRTRGNEALFIPV
IFILFSLGGAVFGMGEEAIAFAIIICPLMIRLGYDGITTVMVTYVATQIGFASSWMNPFSVAIAQGIAGVPVLSGSGMRF
VMWSGFTLMGLIFTMRYAAKVKAMPTHSFSYQSDSYFRENLKESNLESRFNLGDILVLLTIFATVAWIIWGVIAKAWFIP
EIASQFFTMGIVVGIIGVVFKLNKMNINTVAVSFKQGAATMLEPAVLVGCASGILLLLGGGDASTPSVLNTILSKAGEFI
GQLPSVMSAWFMYVFQSVFNFFVTSGSGQAALTMPLMAPLADLVGVTRQVAVLAFQLGDGFTNILVPTSASLMATLGVCR
VDWGQWLKFIWRFMLTLFVTSSVIVIGAHYMGFS

Sequences:

>Translated_514_residues
MDPVSASNTLDNQLVTPKTTVRMPDTLVIIFFVAIAAAILTYFVPIGSFQTQDISYVVDGVEKSRSVIDPNSFAYEVDDA
GSPILNPVALFEGNGGAGFFNFAFEGLVSGSKWGSAIGVIMFMLVIGGAFGIVMATGTIDNGILKLIDRTRGNEALFIPV
IFILFSLGGAVFGMGEEAIAFAIIICPLMIRLGYDGITTVMVTYVATQIGFASSWMNPFSVAIAQGIAGVPVLSGSGMRF
VMWSGFTLMGLIFTMRYAAKVKAMPTHSFSYQSDSYFRENLKESNLESRFNLGDILVLLTIFATVAWIIWGVIAKAWFIP
EIASQFFTMGIVVGIIGVVFKLNKMNINTVAVSFKQGAATMLEPAVLVGCASGILLLLGGGDASTPSVLNTILSKAGEFI
GQLPSVMSAWFMYVFQSVFNFFVTSGSGQAALTMPLMAPLADLVGVTRQVAVLAFQLGDGFTNILVPTSASLMATLGVCR
VDWGQWLKFIWRFMLTLFVTSSVIVIGAHYMGFS
>Mature_514_residues
MDPVSASNTLDNQLVTPKTTVRMPDTLVIIFFVAIAAAILTYFVPIGSFQTQDISYVVDGVEKSRSVIDPNSFAYEVDDA
GSPILNPVALFEGNGGAGFFNFAFEGLVSGSKWGSAIGVIMFMLVIGGAFGIVMATGTIDNGILKLIDRTRGNEALFIPV
IFILFSLGGAVFGMGEEAIAFAIIICPLMIRLGYDGITTVMVTYVATQIGFASSWMNPFSVAIAQGIAGVPVLSGSGMRF
VMWSGFTLMGLIFTMRYAAKVKAMPTHSFSYQSDSYFRENLKESNLESRFNLGDILVLLTIFATVAWIIWGVIAKAWFIP
EIASQFFTMGIVVGIIGVVFKLNKMNINTVAVSFKQGAATMLEPAVLVGCASGILLLLGGGDASTPSVLNTILSKAGEFI
GQLPSVMSAWFMYVFQSVFNFFVTSGSGQAALTMPLMAPLADLVGVTRQVAVLAFQLGDGFTNILVPTSASLMATLGVCR
VDWGQWLKFIWRFMLTLFVTSSVIVIGAHYMGFS

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycgA [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=500, Percent_Identity=65, Blast_Score=634, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 55104; Mature: 55104

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPVSASNTLDNQLVTPKTTVRMPDTLVIIFFVAIAAAILTYFVPIGSFQTQDISYVVDG
CCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
VEKSRSVIDPNSFAYEVDDAGSPILNPVALFEGNGGAGFFNFAFEGLVSGSKWGSAIGVI
HHHCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHH
MFMLVIGGAFGIVMATGTIDNGILKLIDRTRGNEALFIPVIFILFSLGGAVFGMGEEAIA
HHHHHHCCHHEEHEEECCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHCCCCHHHHH
FAIIICPLMIRLGYDGITTVMVTYVATQIGFASSWMNPFSVAIAQGIAGVPVLSGSGMRF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCCEE
VMWSGFTLMGLIFTMRYAAKVKAMPTHSFSYQSDSYFRENLKESNLESRFNLGDILVLLT
EEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHH
IFATVAWIIWGVIAKAWFIPEIASQFFTMGIVVGIIGVVFKLNKMNINTVAVSFKQGAAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHH
MLEPAVLVGCASGILLLLGGGDASTPSVLNTILSKAGEFIGQLPSVMSAWFMYVFQSVFN
HHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFVTSGSGQAALTMPLMAPLADLVGVTRQVAVLAFQLGDGFTNILVPTSASLMATLGVCR
HHEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
VDWGQWLKFIWRFMLTLFVTSSVIVIGAHYMGFS
CCHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCC
>Mature Secondary Structure
MDPVSASNTLDNQLVTPKTTVRMPDTLVIIFFVAIAAAILTYFVPIGSFQTQDISYVVDG
CCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
VEKSRSVIDPNSFAYEVDDAGSPILNPVALFEGNGGAGFFNFAFEGLVSGSKWGSAIGVI
HHHCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHH
MFMLVIGGAFGIVMATGTIDNGILKLIDRTRGNEALFIPVIFILFSLGGAVFGMGEEAIA
HHHHHHCCHHEEHEEECCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHCCCCHHHHH
FAIIICPLMIRLGYDGITTVMVTYVATQIGFASSWMNPFSVAIAQGIAGVPVLSGSGMRF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCCEE
VMWSGFTLMGLIFTMRYAAKVKAMPTHSFSYQSDSYFRENLKESNLESRFNLGDILVLLT
EEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHH
IFATVAWIIWGVIAKAWFIPEIASQFFTMGIVVGIIGVVFKLNKMNINTVAVSFKQGAAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHH
MLEPAVLVGCASGILLLLGGGDASTPSVLNTILSKAGEFIGQLPSVMSAWFMYVFQSVFN
HHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFVTSGSGQAALTMPLMAPLADLVGVTRQVAVLAFQLGDGFTNILVPTSASLMATLGVCR
HHEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
VDWGQWLKFIWRFMLTLFVTSSVIVIGAHYMGFS
CCHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 7883769 [H]