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The map label for this gene is 167624501

Identifier: 167624501

GI number: 167624501

Start: 3126071

End: 3127411

Strand: Reverse

Name: 167624501

Synonym: Shal_2580

Alternate gene names: NA

Gene position: 3127411-3126071 (Counterclockwise)

Preceding gene: 167624503

Following gene: 167624500

Centisome position: 59.83

GC content: 44.82

Gene sequence:

>1341_bases
ATGAGGCAGCAGCAGATGAGTAAACATGATGATCCTAAGACCTGGGTAACGCCATTTGCCTTTGATGTATCGCCAAATAT
TCTTTACTTGCCATTAGCAAGTCCGCTTAAGCGAGGCTTGGCCATGATGATCGATGGCCTTTTGGTTGCCGTGCTCGCCG
AAAGCGCTGGCTGGCTCTTTATCTTATTGGTGTTGGCTACACTCTTAATTCAAAAGCAGAGTAAAGCCGTGGGCAAGTTG
TTTAAGTGGGGATTATACCTACTGATGTTGGCTGCTTTGATCTCGGCAGTCGTTGGTTATTATAGCGACGTAACGGTTAA
ACCGCCAAAGCAGGGAAGCCATTTAGACGCTAATGGCAGCATTGTGAAACCAGCAAATGGCGATGATGGCTTAGCGAGTT
TGACTGAAATGGTGGGCTATGTGCCGGCCGTGATTGTTGCAAGTCAGTGTGAAGATTTTGCTTGTGCGCAAAAGAAAATG
GCCGAAGTGGAGCAGGCCTTGTCTCGCTCAAGCCTGCCAACAGCAGAGCAAACACAAATAATCAATGAGTTAGTAGCAGG
ATTACCGCTTTCGACGATGGAGAAGCAACAGCTTTATCGACAGCAAGATCTTGAGAAAGGCGCACCGCAAGTCAGTGAGT
TAGGAGCCAACCCAGATACGGAGGCTGGTATAAGTAGTAATACAAAGAACAGTACTAAATTAATTGCTAAATCAAGCGCT
AAATCAAATACTGGATCCGATGAAGAAGCGGATATCAAAGCCAAAACCGCTCTAGACTCAAAACCTGAGATTGGAGCCGA
TTTATCTGAAGCTGGCGATATGCAGGCTCAAGGTTTTATGTCAGAGACCGCGATGGAAGGAAGCTTAGAAAAGATAGAGG
AAGCTGCGCAAGCGTTAGAAAATCAAAATGTTCAGCTCGAATTTCTGCCAGAAAAAAATGAATCGACAACTAGTCCGTTG
GCGTGGATTAAAGGTTTACTCAATGATCTTGGTTTAGGCTTTGGTTGGGCCGCTTTTTATTTTACCGTGTTCACCGCATG
GTTTGATGGTCAAACATTAGGTAAGAAGCTATTTGGCATTCGTGTCATTCAACTCGATGGCACCAAAATCTCACTCTGGG
ATGCGTTTGGTCGATATGGTGGTTACGCGGCAGGGTTTACCACTGGTTTGTTAGGCTTTTTCCAGATCTACTGGGACGCT
AATAGGCAAGCGATTCAAGATAAAATTTCGGCAACCGTGGTCATTGATGTGCGTAAAACCAAACATGAAGCTGCACTTGA
ACATGCCGCTATAGATAATAAATCTATTAACTTAGCGGTTGAAACGGGTGTAAATATTTGA

Upstream 100 bases:

>100_bases
ATGCTGTGTTAACATAATGTTACTTTTGAGGTTCGAGTCTGTCAGTTCCCCAGTTACAACGGGATATTCGTGTCGCTAAA
CAGGCTAATGAGGTGGTTCT

Downstream 100 bases:

>100_bases
CATTAGTTATACCGTTTTCTCCCCGCAGACGTTAAGCTGAAAACGAATAAGAAGCGCGTAAATATAATATGCGACGGAAT
AATATTTCCTATTTCGACCT

Product: RDD domain-containing protein

Products: NA

Alternate protein names: RDD Domain Containing Protein

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MRQQQMSKHDDPKTWVTPFAFDVSPNILYLPLASPLKRGLAMMIDGLLVAVLAESAGWLFILLVLATLLIQKQSKAVGKL
FKWGLYLLMLAALISAVVGYYSDVTVKPPKQGSHLDANGSIVKPANGDDGLASLTEMVGYVPAVIVASQCEDFACAQKKM
AEVEQALSRSSLPTAEQTQIINELVAGLPLSTMEKQQLYRQQDLEKGAPQVSELGANPDTEAGISSNTKNSTKLIAKSSA
KSNTGSDEEADIKAKTALDSKPEIGADLSEAGDMQAQGFMSETAMEGSLEKIEEAAQALENQNVQLEFLPEKNESTTSPL
AWIKGLLNDLGLGFGWAAFYFTVFTAWFDGQTLGKKLFGIRVIQLDGTKISLWDAFGRYGGYAAGFTTGLLGFFQIYWDA
NRQAIQDKISATVVIDVRKTKHEAALEHAAIDNKSINLAVETGVNI

Sequences:

>Translated_446_residues
MRQQQMSKHDDPKTWVTPFAFDVSPNILYLPLASPLKRGLAMMIDGLLVAVLAESAGWLFILLVLATLLIQKQSKAVGKL
FKWGLYLLMLAALISAVVGYYSDVTVKPPKQGSHLDANGSIVKPANGDDGLASLTEMVGYVPAVIVASQCEDFACAQKKM
AEVEQALSRSSLPTAEQTQIINELVAGLPLSTMEKQQLYRQQDLEKGAPQVSELGANPDTEAGISSNTKNSTKLIAKSSA
KSNTGSDEEADIKAKTALDSKPEIGADLSEAGDMQAQGFMSETAMEGSLEKIEEAAQALENQNVQLEFLPEKNESTTSPL
AWIKGLLNDLGLGFGWAAFYFTVFTAWFDGQTLGKKLFGIRVIQLDGTKISLWDAFGRYGGYAAGFTTGLLGFFQIYWDA
NRQAIQDKISATVVIDVRKTKHEAALEHAAIDNKSINLAVETGVNI
>Mature_446_residues
MRQQQMSKHDDPKTWVTPFAFDVSPNILYLPLASPLKRGLAMMIDGLLVAVLAESAGWLFILLVLATLLIQKQSKAVGKL
FKWGLYLLMLAALISAVVGYYSDVTVKPPKQGSHLDANGSIVKPANGDDGLASLTEMVGYVPAVIVASQCEDFACAQKKM
AEVEQALSRSSLPTAEQTQIINELVAGLPLSTMEKQQLYRQQDLEKGAPQVSELGANPDTEAGISSNTKNSTKLIAKSSA
KSNTGSDEEADIKAKTALDSKPEIGADLSEAGDMQAQGFMSETAMEGSLEKIEEAAQALENQNVQLEFLPEKNESTTSPL
AWIKGLLNDLGLGFGWAAFYFTVFTAWFDGQTLGKKLFGIRVIQLDGTKISLWDAFGRYGGYAAGFTTGLLGFFQIYWDA
NRQAIQDKISATVVIDVRKTKHEAALEHAAIDNKSINLAVETGVNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48207; Mature: 48207

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQQQMSKHDDPKTWVTPFAFDVSPNILYLPLASPLKRGLAMMIDGLLVAVLAESAGWLF
CCCHHCCCCCCCCCEECEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHH
ILLVLATLLIQKQSKAVGKLFKWGLYLLMLAALISAVVGYYSDVTVKPPKQGSHLDANGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC
IVKPANGDDGLASLTEMVGYVPAVIVASQCEDFACAQKKMAEVEQALSRSSLPTAEQTQI
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
INELVAGLPLSTMEKQQLYRQQDLEKGAPQVSELGANPDTEAGISSNTKNSTKLIAKSSA
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHEEEECCC
KSNTGSDEEADIKAKTALDSKPEIGADLSEAGDMQAQGFMSETAMEGSLEKIEEAAQALE
CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
NQNVQLEFLPEKNESTTSPLAWIKGLLNDLGLGFGWAAFYFTVFTAWFDGQTLGKKLFGI
CCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCE
RVIQLDGTKISLWDAFGRYGGYAAGFTTGLLGFFQIYWDANRQAIQDKISATVVIDVRKT
EEEEECCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEEHHH
KHEAALEHAAIDNKSINLAVETGVNI
HHHHHHHHHHCCCCCEEEEECCCCCC
>Mature Secondary Structure
MRQQQMSKHDDPKTWVTPFAFDVSPNILYLPLASPLKRGLAMMIDGLLVAVLAESAGWLF
CCCHHCCCCCCCCCEECEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHH
ILLVLATLLIQKQSKAVGKLFKWGLYLLMLAALISAVVGYYSDVTVKPPKQGSHLDANGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC
IVKPANGDDGLASLTEMVGYVPAVIVASQCEDFACAQKKMAEVEQALSRSSLPTAEQTQI
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
INELVAGLPLSTMEKQQLYRQQDLEKGAPQVSELGANPDTEAGISSNTKNSTKLIAKSSA
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHEEEECCC
KSNTGSDEEADIKAKTALDSKPEIGADLSEAGDMQAQGFMSETAMEGSLEKIEEAAQALE
CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
NQNVQLEFLPEKNESTTSPLAWIKGLLNDLGLGFGWAAFYFTVFTAWFDGQTLGKKLFGI
CCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCE
RVIQLDGTKISLWDAFGRYGGYAAGFTTGLLGFFQIYWDANRQAIQDKISATVVIDVRKT
EEEEECCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEEHHH
KHEAALEHAAIDNKSINLAVETGVNI
HHHHHHHHHHCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA