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The map label for this gene is 167624371

Identifier: 167624371

GI number: 167624371

Start: 2953908

End: 2955185

Strand: Reverse

Name: 167624371

Synonym: Shal_2448

Alternate gene names: NA

Gene position: 2955185-2953908 (Counterclockwise)

Preceding gene: 167624372

Following gene: 167624370

Centisome position: 56.54

GC content: 46.24

Gene sequence:

>1278_bases
ATGATTAACCTAATGGATAAAAACGTAAACGTGCCTGATGAGCGACAAATGAACGCAAGTTTGACGGCTAAGCGGCCTCG
ATTACTCAGTGTTTTGCTCGTCGGTATCATGCTGTCTGTAACGGCTTGTGGTGACTCGGCAAGCAAAGGGGTGTTAACGG
TTGAAGTGAGTCGTTCTGACTTTAAAGTTGATATTCCAGCATCTGGCGAGTTAGAGGCAAGCAACTCGACCACGGTTAAT
GTTCCTACAGGTCTGAGAGGCCCGCAGTCTCTTGCTTGGATCATGAACAATTTTAGTATCGTTAAAGCCGGTGATGTGGT
TGCACGAATGGATGGCACTCGAGAAAGCTTTCGGTTAGAGATGGAAGCGCTCGATTATGATCGCCTAGGCCTCGATAGCC
AAATCCAGACTCAAAAAGATAAAACCATTGATAAGAGTTTGACAACCGACACTAGGCTTACTGCTCAAGAGCAGGACTTA
GCCGATCGATTTTTCAGCGAAGATGAACGGATTTATACCAAAATCGATATTATCGACCAGATGCGTAACCAAGATTATCT
CGAAGCCAAGATGGATTTTTACGACTGGGGCCTTAGTCAGCACGGCTCTCAAGCGCAAGCGGAGCAAGAGTTAATTAAGT
TAAAGCAAAAGGGCCATAAGGCGAAGATGAACCGTTACTCCAGTAACCTAAAGCAGATGGAGATCGTCGCGCCTCATGAC
GGGATATTTGTCGCGCAAACGGGCTGGAATGGTAAGTTACCCGCTGCCGGCGACATGATGTGGTCGGGTATGGCTATCGG
CCTATTACCCGACACATCAAAGATGCAGGCCAAATTACATGTACTCGAATCGGAAGCTTTAGGGTTAGCGATAGGTAAGC
CTGTGACCTTATATCTTGATGCTTATCCGGAGTTTGCAATAAACGGTACCTTGACTCAACTCGATGCATTAGCAAAAGCC
AAAGAGCAAGACAGTCCGGTAAACTATTTTGAGATAACGGTGACTTTGGATAAGACCATAACGGAAATCATGCAACCTGG
CCGACAAGTTAATGCCATGGTTCATGCTTTAGATCTCAATGATGTTATTACCGTGCCGAATCAGGCTCTGTTTCAAAAGT
CTGGCGAATACTGGGTTTACCTAAAGACATCGGCAGGCTTTGCTAAGCAAAGGGTTACACTTGGGAATCGTAGCCTCAAC
AGAACGGTGATCACCGAAGGGTTGAAGCAAGGGGATACCATTGCATTGACTACGCCACCGAAAAGGAATCGTGTATGA

Upstream 100 bases:

>100_bases
TAGTTAGCGACACTAAACAATACGTGGGTCTTGGAGCTATGGGGAAAGAGCGAGTAGCGATTACCTCAGGGTTAATAGCG
GGAGATGAGGTGCTATTGCC

Downstream 100 bases:

>100_bases
CCGTTAACAGAGCATCGGTGAACCTGGTTAAACCGCTTAAAAATGACGCCTCTAGAAAATCATCGGTGCTTATCGCCGTC
TATTGGGAGGGCATTAAACA

Product: membrane-fusion protein

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; RND Family Efflux Transporter MFP Subunit; Multidrug Resistance Efflux Pump-Like Protein; Secretion Protein HlyD Family Protein; Secretion Protein HlyD; HlyD Family Secretion Protein; Efflux Transporter Rnd Family Mfp Subunit; Membrane-Fusion Protein-Like Protein

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MINLMDKNVNVPDERQMNASLTAKRPRLLSVLLVGIMLSVTACGDSASKGVLTVEVSRSDFKVDIPASGELEASNSTTVN
VPTGLRGPQSLAWIMNNFSIVKAGDVVARMDGTRESFRLEMEALDYDRLGLDSQIQTQKDKTIDKSLTTDTRLTAQEQDL
ADRFFSEDERIYTKIDIIDQMRNQDYLEAKMDFYDWGLSQHGSQAQAEQELIKLKQKGHKAKMNRYSSNLKQMEIVAPHD
GIFVAQTGWNGKLPAAGDMMWSGMAIGLLPDTSKMQAKLHVLESEALGLAIGKPVTLYLDAYPEFAINGTLTQLDALAKA
KEQDSPVNYFEITVTLDKTITEIMQPGRQVNAMVHALDLNDVITVPNQALFQKSGEYWVYLKTSAGFAKQRVTLGNRSLN
RTVITEGLKQGDTIALTTPPKRNRV

Sequences:

>Translated_425_residues
MINLMDKNVNVPDERQMNASLTAKRPRLLSVLLVGIMLSVTACGDSASKGVLTVEVSRSDFKVDIPASGELEASNSTTVN
VPTGLRGPQSLAWIMNNFSIVKAGDVVARMDGTRESFRLEMEALDYDRLGLDSQIQTQKDKTIDKSLTTDTRLTAQEQDL
ADRFFSEDERIYTKIDIIDQMRNQDYLEAKMDFYDWGLSQHGSQAQAEQELIKLKQKGHKAKMNRYSSNLKQMEIVAPHD
GIFVAQTGWNGKLPAAGDMMWSGMAIGLLPDTSKMQAKLHVLESEALGLAIGKPVTLYLDAYPEFAINGTLTQLDALAKA
KEQDSPVNYFEITVTLDKTITEIMQPGRQVNAMVHALDLNDVITVPNQALFQKSGEYWVYLKTSAGFAKQRVTLGNRSLN
RTVITEGLKQGDTIALTTPPKRNRV
>Mature_425_residues
MINLMDKNVNVPDERQMNASLTAKRPRLLSVLLVGIMLSVTACGDSASKGVLTVEVSRSDFKVDIPASGELEASNSTTVN
VPTGLRGPQSLAWIMNNFSIVKAGDVVARMDGTRESFRLEMEALDYDRLGLDSQIQTQKDKTIDKSLTTDTRLTAQEQDL
ADRFFSEDERIYTKIDIIDQMRNQDYLEAKMDFYDWGLSQHGSQAQAEQELIKLKQKGHKAKMNRYSSNLKQMEIVAPHD
GIFVAQTGWNGKLPAAGDMMWSGMAIGLLPDTSKMQAKLHVLESEALGLAIGKPVTLYLDAYPEFAINGTLTQLDALAKA
KEQDSPVNYFEITVTLDKTITEIMQPGRQVNAMVHALDLNDVITVPNQALFQKSGEYWVYLKTSAGFAKQRVTLGNRSLN
RTVITEGLKQGDTIALTTPPKRNRV

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47153; Mature: 47153

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLMDKNVNVPDERQMNASLTAKRPRLLSVLLVGIMLSVTACGDSASKGVLTVEVSRSD
CCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
FKVDIPASGELEASNSTTVNVPTGLRGPQSLAWIMNNFSIVKAGDVVARMDGTRESFRLE
EEEECCCCCCEECCCCEEEECCCCCCCHHHHHHHHCCCEEEECCCEEEECCCCCHHHEEE
MEALDYDRLGLDSQIQTQKDKTIDKSLTTDTRLTAQEQDLADRFFSEDERIYTKIDIIDQ
EECCCCHHCCCCCHHHCCHHHHHHHHCCCCCEECCHHHHHHHHHHCCCCEEEEEHHHHHH
MRNQDYLEAKMDFYDWGLSQHGSQAQAEQELIKLKQKGHKAKMNRYSSNLKQMEIVAPHD
HCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCC
GIFVAQTGWNGKLPAAGDMMWSGMAIGLLPDTSKMQAKLHVLESEALGLAIGKPVTLYLD
CEEEEECCCCCCCCCCCCHHCCCEEEEECCCCHHHHHEEEEECCCCCEEEECCCEEEEEE
AYPEFAINGTLTQLDALAKAKEQDSPVNYFEITVTLDKTITEIMQPGRQVNAMVHALDLN
CCCCEEECCHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHCCCHHEEHEEEEECCC
DVITVPNQALFQKSGEYWVYLKTSAGFAKQRVTLGNRSLNRTVITEGLKQGDTIALTTPP
CEEECCCHHHHHCCCCEEEEEECCCCCCHHEEEECCCCCCHHHHHHHHCCCCEEEEECCC
KRNRV
CCCCC
>Mature Secondary Structure
MINLMDKNVNVPDERQMNASLTAKRPRLLSVLLVGIMLSVTACGDSASKGVLTVEVSRSD
CCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
FKVDIPASGELEASNSTTVNVPTGLRGPQSLAWIMNNFSIVKAGDVVARMDGTRESFRLE
EEEECCCCCCEECCCCEEEECCCCCCCHHHHHHHHCCCEEEECCCEEEECCCCCHHHEEE
MEALDYDRLGLDSQIQTQKDKTIDKSLTTDTRLTAQEQDLADRFFSEDERIYTKIDIIDQ
EECCCCHHCCCCCHHHCCHHHHHHHHCCCCCEECCHHHHHHHHHHCCCCEEEEEHHHHHH
MRNQDYLEAKMDFYDWGLSQHGSQAQAEQELIKLKQKGHKAKMNRYSSNLKQMEIVAPHD
HCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCC
GIFVAQTGWNGKLPAAGDMMWSGMAIGLLPDTSKMQAKLHVLESEALGLAIGKPVTLYLD
CEEEEECCCCCCCCCCCCHHCCCEEEEECCCCHHHHHEEEEECCCCCEEEECCCEEEEEE
AYPEFAINGTLTQLDALAKAKEQDSPVNYFEITVTLDKTITEIMQPGRQVNAMVHALDLN
CCCCEEECCHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHCCCHHEEHEEEEECCC
DVITVPNQALFQKSGEYWVYLKTSAGFAKQRVTLGNRSLNRTVITEGLKQGDTIALTTPP
CEEECCCHHHHHCCCCEEEEEECCCCCCHHEEEECCCCCCHHHHHHHHCCCCEEEEECCC
KRNRV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA