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The map label for this gene is mrp [H]

Identifier: 167624304

GI number: 167624304

Start: 2879892

End: 2881007

Strand: Reverse

Name: mrp [H]

Synonym: Shal_2380

Alternate gene names: 167624304

Gene position: 2881007-2879892 (Counterclockwise)

Preceding gene: 167624306

Following gene: 167624303

Centisome position: 55.12

GC content: 46.33

Gene sequence:

>1116_bases
TTGTCTTCAACTCATCCAAATTATCATCTTGATGATGCTCTTCTCAGCCAGGTGTTGGCGATTCTTGATACGTTCCAAGA
CACGTATTTGAACAAGAGTCTGCTAAGTGCAGGTATGGTCACTAAGCTTGCAATTGAAGGTAAGCGACTACAGTTAGGCT
TGTGTTACTCGTATCCTTGTCAGACGCTGTACCGTGACACTGTGATGGCTGTGACTAAAGCGTTAGCAGTATTGGATGCG
ATTGAAGAAGTTGAATGTGAAATAGACTTCCAGCCAGAGACCGTTTCTGCGATTAGCGCGGTTGAGCCTCTGCCAAACAT
TAAGCAAGTGATTGCCGTTGCATCAGGTAAAGGTGGTGTGGGTAAATCGACAACTGCCGTTAACTTAGCTTTGGCATTAG
CAGCAGAAGGCGCAAGTGTTGGTATCTTAGATGCCGATATCTACGGCCCATCGATTCCAATGATGCTTGGGGTTGAAGAC
TTCAAGCCTGTCTCACCTGATGGCAAGATCATGACATTTGCACCTGCTCATGGCATTGCTGCACAGTCAATCGGTTTTAT
GCTTGATGGCGACCAAGCTGCCGTGTGGCGCGGCCCTATGGCAGCGGGTGCATTGGTACAGTTACTCACAGAAACTGAGT
GGCCAGAGCTGGATTACTTAGTCATTGATATGCCACCAGGAACCGGTGATATTCAGTTAACCTTGTCACAAAAAGTACCT
GTAAGTGGCGCCGTGATTGTGACGACACCACAGGATATCGCCTTGGCTGACGCTAAAAAAGGCGTGAATATGTTCCAGAA
AGTGAACATTCCTGTATTAGGTATTGTTGAAAACATGAGCTTCCACCTTTGCCCTGAGTGTGGTCATAAAGATCATCCAT
TTGGTGCAGAAGGCGGTCAAAAAATGGCGACGCGCTACAATGTGCCGCTATTAGGTCAGTTACCATTGCAACTGAATATA
CGTGAGGATGTGGATAAAGGCACACCTACAGTTGTGGCTGATGAATCGAGTCAAGTTGCTGGTATTTATCGTGAAATCGC
AAGAAAGGTTGGGGCTCAGCTTGCGTTATGTCAAGCACAGCCTAAAGTATCAATTAGCATGTCTGATGACGAATAA

Upstream 100 bases:

>100_bases
ATAGTTTCATCAAAAGCTCGCACAAGTGCATTAAATCTAGACTAATGTTTGCCAGAATATCTGGTACAATTGCGCAAATC
ATATTTAGGGGGTCTGCATT

Downstream 100 bases:

>100_bases
GGTCTATTTAAATGAATTCTAAAGATTGTGTTGTAATTGGTATTGCGGGTGCGTCAGCATCAGGTAAGAGTCTTATCGCT
AAAACGATTTATGAAGAACT

Product: ATP-binding Mrp/Nbp35 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MSSTHPNYHLDDALLSQVLAILDTFQDTYLNKSLLSAGMVTKLAIEGKRLQLGLCYSYPCQTLYRDTVMAVTKALAVLDA
IEEVECEIDFQPETVSAISAVEPLPNIKQVIAVASGKGGVGKSTTAVNLALALAAEGASVGILDADIYGPSIPMMLGVED
FKPVSPDGKIMTFAPAHGIAAQSIGFMLDGDQAAVWRGPMAAGALVQLLTETEWPELDYLVIDMPPGTGDIQLTLSQKVP
VSGAVIVTTPQDIALADAKKGVNMFQKVNIPVLGIVENMSFHLCPECGHKDHPFGAEGGQKMATRYNVPLLGQLPLQLNI
REDVDKGTPTVVADESSQVAGIYREIARKVGAQLALCQAQPKVSISMSDDE

Sequences:

>Translated_371_residues
MSSTHPNYHLDDALLSQVLAILDTFQDTYLNKSLLSAGMVTKLAIEGKRLQLGLCYSYPCQTLYRDTVMAVTKALAVLDA
IEEVECEIDFQPETVSAISAVEPLPNIKQVIAVASGKGGVGKSTTAVNLALALAAEGASVGILDADIYGPSIPMMLGVED
FKPVSPDGKIMTFAPAHGIAAQSIGFMLDGDQAAVWRGPMAAGALVQLLTETEWPELDYLVIDMPPGTGDIQLTLSQKVP
VSGAVIVTTPQDIALADAKKGVNMFQKVNIPVLGIVENMSFHLCPECGHKDHPFGAEGGQKMATRYNVPLLGQLPLQLNI
REDVDKGTPTVVADESSQVAGIYREIARKVGAQLALCQAQPKVSISMSDDE
>Mature_370_residues
SSTHPNYHLDDALLSQVLAILDTFQDTYLNKSLLSAGMVTKLAIEGKRLQLGLCYSYPCQTLYRDTVMAVTKALAVLDAI
EEVECEIDFQPETVSAISAVEPLPNIKQVIAVASGKGGVGKSTTAVNLALALAAEGASVGILDADIYGPSIPMMLGVEDF
KPVSPDGKIMTFAPAHGIAAQSIGFMLDGDQAAVWRGPMAAGALVQLLTETEWPELDYLVIDMPPGTGDIQLTLSQKVPV
SGAVIVTTPQDIALADAKKGVNMFQKVNIPVLGIVENMSFHLCPECGHKDHPFGAEGGQKMATRYNVPLLGQLPLQLNIR
EDVDKGTPTVVADESSQVAGIYREIARKVGAQLALCQAQPKVSISMSDDE

Specific function: Not Known. [C]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]

Homologues:

Organism=Homo sapiens, GI157384956, Length=255, Percent_Identity=52.156862745098, Blast_Score=254, Evalue=8e-68,
Organism=Homo sapiens, GI118572611, Length=275, Percent_Identity=37.8181818181818, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI6912540, Length=263, Percent_Identity=38.7832699619772, Blast_Score=169, Evalue=5e-42,
Organism=Escherichia coli, GI87082045, Length=343, Percent_Identity=51.0204081632653, Blast_Score=345, Evalue=3e-96,
Organism=Caenorhabditis elegans, GI25143050, Length=257, Percent_Identity=40.0778210116732, Blast_Score=178, Evalue=4e-45,
Organism=Saccharomyces cerevisiae, GI6322188, Length=268, Percent_Identity=37.3134328358209, Blast_Score=182, Evalue=8e-47,
Organism=Saccharomyces cerevisiae, GI6321347, Length=232, Percent_Identity=39.6551724137931, Blast_Score=152, Evalue=6e-38,
Organism=Drosophila melanogaster, GI221511043, Length=249, Percent_Identity=37.7510040160643, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24667611, Length=260, Percent_Identity=42.3076923076923, Blast_Score=188, Evalue=4e-48,
Organism=Drosophila melanogaster, GI19921440, Length=241, Percent_Identity=39.0041493775934, Blast_Score=140, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019591
- InterPro:   IPR000808 [H]

Pfam domain/function: PF10609 ParA [H]

EC number: NA

Molecular weight: Translated: 39403; Mature: 39272

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS01215 MRP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTHPNYHLDDALLSQVLAILDTFQDTYLNKSLLSAGMVTKLAIEGKRLQLGLCYSYPC
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCH
QTLYRDTVMAVTKALAVLDAIEEVECEIDFQPETVSAISAVEPLPNIKQVIAVASGKGGV
HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCHHHHHEEECCCCCC
GKSTTAVNLALALAAEGASVGILDADIYGPSIPMMLGVEDFKPVSPDGKIMTFAPAHGIA
CCCCHHEEEEEEEEECCCEEEEEEECCCCCCCCEEEEHHHCCCCCCCCCEEEEECCCCCH
AQSIGFMLDGDQAAVWRGPMAAGALVQLLTETEWPELDYLVIDMPPGTGDIQLTLSQKVP
HHHCCEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCC
VSGAVIVTTPQDIALADAKKGVNMFQKVNIPVLGIVENMSFHLCPECGHKDHPFGAEGGQ
CCCEEEEECCCCHHHHHHHHCHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCC
KMATRYNVPLLGQLPLQLNIREDVDKGTPTVVADESSQVAGIYREIARKVGAQLALCQAQ
HHHHCCCCCEEECCCEEEEEHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCC
PKVSISMSDDE
CCEEEEECCCC
>Mature Secondary Structure 
SSTHPNYHLDDALLSQVLAILDTFQDTYLNKSLLSAGMVTKLAIEGKRLQLGLCYSYPC
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCH
QTLYRDTVMAVTKALAVLDAIEEVECEIDFQPETVSAISAVEPLPNIKQVIAVASGKGGV
HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCHHHHHEEECCCCCC
GKSTTAVNLALALAAEGASVGILDADIYGPSIPMMLGVEDFKPVSPDGKIMTFAPAHGIA
CCCCHHEEEEEEEEECCCEEEEEEECCCCCCCCEEEEHHHCCCCCCCCCEEEEECCCCCH
AQSIGFMLDGDQAAVWRGPMAAGALVQLLTETEWPELDYLVIDMPPGTGDIQLTLSQKVP
HHHCCEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCC
VSGAVIVTTPQDIALADAKKGVNMFQKVNIPVLGIVENMSFHLCPECGHKDHPFGAEGGQ
CCCEEEEECCCCHHHHHHHHCHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCC
KMATRYNVPLLGQLPLQLNIREDVDKGTPTVVADESSQVAGIYREIARKVGAQLALCQAQ
HHHHCCCCCEEECCCEEEEEHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCC
PKVSISMSDDE
CCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]