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The map label for this gene is ybgI [C]

Identifier: 167624306

GI number: 167624306

Start: 2883391

End: 2884143

Strand: Reverse

Name: ybgI [C]

Synonym: Shal_2382

Alternate gene names: 167624306

Gene position: 2884143-2883391 (Counterclockwise)

Preceding gene: 167624312

Following gene: 167624304

Centisome position: 55.18

GC content: 44.36

Gene sequence:

>753_bases
ATGACTCGAACCGAATTAAGCCAATACTTGGCAAGCTTTTTACAAATTTCAAATTTTAAAGATTATGCGCCAAACGGTTT
GCAGGTCGAAGGCAAGGCTGAGATCAACACGATTGTGACAGGTGTAACGGCTTGCCAAGCATTGATTGATGCAGCAATAG
CGCTGAACGCAGACGCAATTTTGGTTCATCATGGATTCTTTTGGAAAAGTGAACCAGAAGTGATTGTTGGTATGAAACAA
AAGCGGATCAAAGCACTGTTGATTAATGACATTAATTTGTTTGGCTATCACTTGCCGTTAGATGCTCATCCTGCGGTTGG
TAATAATGCCCAGTTGGCAAGCGTGTTAGGGCTTGTTGAGCCGGAAGTGATTGAAAACGTCGCACAAGGTTTAATGTGGC
AAGGAAAGCTTACGACTCCCATAACTGCGAGTGATTTTAACCAGCAGATCTCTAATAAGCTGAGCCGTCAATGTCAGCAT
CTAGGCGATAGTGATGCCATGGTTAGCACGGTCGCTTGGTGTACTGGTGGCGCGCAGGATTATATTGATATCGCAGCAAA
TATGGGATTTGACGCGTTTATTAGCGGAGAGGTATCTGAGCGAACTTATCACTGCGCTGTAGAGCAGGGGATCCAGTATT
ATGCAGCAGGCCATCATGCGACAGAATTATACGGTATTCAGGCGTTAGGTGAACACCTCGCCGAGCAGTTTGGTATTAAG
CATCATTTCGTCGATATTGTTAATCCTATCTAA

Upstream 100 bases:

>100_bases
GCTTTTTAAGCAGACCACCTTAGTGGCGTATTGATGACTTAACTGTATATTTACACTAACAATAGGTTAAAATACCGTTT
TTGCTACTCTCGGTGGACTT

Downstream 100 bases:

>100_bases
CCGCTAAAACAAACAGATTAGCTTTCGATTTTCTCTCGTTTCGGCACACATTTGTCGAAGCTAATTTGGCCATCTCTTTG
TACTGAACAGCCAATAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTRTELSQYLASFLQISNFKDYAPNGLQVEGKAEINTIVTGVTACQALIDAAIALNADAILVHHGFFWKSEPEVIVGMKQ
KRIKALLINDINLFGYHLPLDAHPAVGNNAQLASVLGLVEPEVIENVAQGLMWQGKLTTPITASDFNQQISNKLSRQCQH
LGDSDAMVSTVAWCTGGAQDYIDIAANMGFDAFISGEVSERTYHCAVEQGIQYYAAGHHATELYGIQALGEHLAEQFGIK
HHFVDIVNPI

Sequences:

>Translated_250_residues
MTRTELSQYLASFLQISNFKDYAPNGLQVEGKAEINTIVTGVTACQALIDAAIALNADAILVHHGFFWKSEPEVIVGMKQ
KRIKALLINDINLFGYHLPLDAHPAVGNNAQLASVLGLVEPEVIENVAQGLMWQGKLTTPITASDFNQQISNKLSRQCQH
LGDSDAMVSTVAWCTGGAQDYIDIAANMGFDAFISGEVSERTYHCAVEQGIQYYAAGHHATELYGIQALGEHLAEQFGIK
HHFVDIVNPI
>Mature_249_residues
TRTELSQYLASFLQISNFKDYAPNGLQVEGKAEINTIVTGVTACQALIDAAIALNADAILVHHGFFWKSEPEVIVGMKQK
RIKALLINDINLFGYHLPLDAHPAVGNNAQLASVLGLVEPEVIENVAQGLMWQGKLTTPITASDFNQQISNKLSRQCQHL
GDSDAMVSTVAWCTGGAQDYIDIAANMGFDAFISGEVSERTYHCAVEQGIQYYAAGHHATELYGIQALGEHLAEQFGIKH
HFVDIVNPI

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=250, Percent_Identity=54, Blast_Score=265, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27251; Mature: 27120

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTELSQYLASFLQISNFKDYAPNGLQVEGKAEINTIVTGVTACQALIDAAIALNADAI
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
LVHHGFFWKSEPEVIVGMKQKRIKALLINDINLFGYHLPLDAHPAVGNNAQLASVLGLVE
EEEECCEECCCCCEEECCHHHHHHHHHEECCEEEEEECCCCCCCCCCCCHHHHHHHHCCC
PEVIENVAQGLMWQGKLTTPITASDFNQQISNKLSRQCQHLGDSDAMVSTVAWCTGGAQD
HHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
YIDIAANMGFDAFISGEVSERTYHCAVEQGIQYYAAGHHATELYGIQALGEHLAEQFGIK
HHHHHHCCCCCEEECCCCCCHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCH
HHFVDIVNPI
HHHHHHCCCC
>Mature Secondary Structure 
TRTELSQYLASFLQISNFKDYAPNGLQVEGKAEINTIVTGVTACQALIDAAIALNADAI
CHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
LVHHGFFWKSEPEVIVGMKQKRIKALLINDINLFGYHLPLDAHPAVGNNAQLASVLGLVE
EEEECCEECCCCCEEECCHHHHHHHHHEECCEEEEEECCCCCCCCCCCCHHHHHHHHCCC
PEVIENVAQGLMWQGKLTTPITASDFNQQISNKLSRQCQHLGDSDAMVSTVAWCTGGAQD
HHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
YIDIAANMGFDAFISGEVSERTYHCAVEQGIQYYAAGHHATELYGIQALGEHLAEQFGIK
HHHHHHCCCCCEEECCCCCCHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCH
HHFVDIVNPI
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]