| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167624212
Identifier: 167624212
GI number: 167624212
Start: 2771079
End: 2773133
Strand: Direct
Name: 167624212
Synonym: Shal_2288
Alternate gene names: NA
Gene position: 2771079-2773133 (Clockwise)
Preceding gene: 167624195
Following gene: 167624213
Centisome position: 53.02
GC content: 41.02
Gene sequence:
>2055_bases ATGAGCGATGACTATGGTTTTGACGAATCCAGAACACAGTTATTAAGGGTGTTCTTTAGAACGCTTGCTATTTTAATATT GTTTACCGTCATTCTGTTTAACTTTAAATCCTCGCTTCAAACCTACTCCGTAATGTCTTTAGCCTCCACAATGAATAGTT TAGATAGCCAGTCCCTATCTGCATACGGGTTGATCTACGACGTTATATTTTTTTTCTGTATTCTAATCGCTATACACATC ATCTGGGCTGCAGTAATAACCGTTTCAACCCGCTGCCCTTGGTTACCTATAGAGGGAAAAAAACAGCAAGATCTATACTG GATGCTATTTGTTGGTCTCCACATTACCTGTTTGATTGCAATTAACTCCTATTTTTACCCTACCTCATTAGTTTCGTACT TTAGGCATACGCCTGTCAGCGAACCTCTTATATGGGGAGGGTTGGCACTGTTTTTAATTATCAGTTTCTATCGAGGCTTA GCCACTTTCACCTCAAAGCAAGTTGTTTTTTCCATCTCTCTGTTATTTACGGTAGGACTCTTCATCCCCTTTCTCTCAAT CAATCAGACAAATGTACAGCCTCAAAAAGATCCAAATATTATTATTTTAGGCATCGACGGTCTTAGGCCAGACCATTTGA AGTACATGGGAGCAGCACCTCAAGTTGCCCCTAACTTGAATCGCTTACTCGATAACATGACGATATACAAAAATGCTTAT ACCCCACAGGGACGAACTTACGTTGCGTGGATGAGTCTTCTTACCGGTAAGTATCCGATTAATAATGGCGTTAGATTTAA TTTAGCCCCACCAGAAATGGTAAATAAAACACTTCCTATAATTGAACTATTAAAGGAGAGAGGCTACCACACGACCTATG CTATTGATGAGCGTCGCTTTAACCAAATTGATTCTAGCTATGGTTTTGATAATACAGTAGGACCCAAGGCTGGTGCCGCA GATGCTCTCATATCGGGGTTAGGCGATCTCCCCTATCTAAATATTCTACTCATGCACCCCTACTCCTCCTATATACTGCC TTACCTATACAACAATAGGGCCTATGGTAAAGCCTACTCGCCTATTGCATTTAATAAGGCTGTCATCGAGAGCCTTGATT ATGAAAACCCCAACTTTCTTGCCGTACACTATTGTCAATTGCATTGGCCATATACCTCTAAAGATTTTATATCGGAGCCT CTAGAAAATTGGGACGGAAATTACAATCACTATATGTATAAGGAGATGTTAAAAAGCGTTGATAAACAAGTTGCTGATCT CTTTACTCGCTTAAAACAGAAAGGAATGCTAGACGATGCGATAGTCTATATTATTTCCGATCATGGTGAGAGCTTTAAAC TGCCCAGTTTCGAGACGCCCACGCCACAAGGTCCCAAGGTATTCCCTAAGACAAAGTCTTGGGGTCATGGCACAAATATC TTGGACCAGCAGCAATCCCTTATTCTTCTGGCTCGGGCTGAATTCAATAATTCGACTATCACCTCTCCCGCACAAAAAAT CGAAGGGCTTTATTCACTGGTAGACATCGTCCCTACGTTAGTGAGTACGTTAAACATTTCAACAGCATCTGTTTCGAGGT TTAAAGGTGCCGATTCCGACGGGATAACGCTCCCTTGGACAGCAGAACAAGTATCGCCTAAGCGATATGTTTTTGTTGAG TCTTCAGTCCCGGTAAAGTCCATTAATAAGAGCTTTATTGATAAGAAAGAGGTCATGTCAGAGACCGCTTCAAATTATGA AGTTAGAAGTGATGGTAAAGCCTACATGCGCACTGAAAACTACATAGAGCTGATAGCCAAAAAACAGCGGGCAATCTACT ACCAACAGTGGCAGCTAAGCTTACTACCCGATTACAACTCTCCCGTGCTTTTAAACACAGAAACAAATGAAATTTATGAC GCTGATAACTACCAAGGTGATTTTAATTGGCGACCAATGATGAGAGAGCTTTGCTCTCAATACAAAGAGGATCCAGGATT TGATCAACACGCAGTTTGTACCGAAGTCAATATTAGTCGTAACTCACTCAATTAA
Upstream 100 bases:
>100_bases TTGGGGGCTGGCCGGCATCAAAAGAGCATAACTTCGTATCATCAGATATTGATTACCCCATAAGAGCGAGCAGTAACAAC GCTTCACAGAAGGAGCGAAA
Downstream 100 bases:
>100_bases TGTCCAACAGTTGAGCGGCAATTACTTCATTTTTCAGGGAACAAGACAGGTACGTTAGCTGTAGCTAGCTGTTTTATAAA AATATGTACTACAGTTATCT
Product: sulfatase
Products: NA
Alternate protein names: Sulfatase Domain Protein; Sulfatase Domain-Containing Protein; Arylsulfatase
Number of amino acids: Translated: 684; Mature: 683
Protein sequence:
>684_residues MSDDYGFDESRTQLLRVFFRTLAILILFTVILFNFKSSLQTYSVMSLASTMNSLDSQSLSAYGLIYDVIFFFCILIAIHI IWAAVITVSTRCPWLPIEGKKQQDLYWMLFVGLHITCLIAINSYFYPTSLVSYFRHTPVSEPLIWGGLALFLIISFYRGL ATFTSKQVVFSISLLFTVGLFIPFLSINQTNVQPQKDPNIIILGIDGLRPDHLKYMGAAPQVAPNLNRLLDNMTIYKNAY TPQGRTYVAWMSLLTGKYPINNGVRFNLAPPEMVNKTLPIIELLKERGYHTTYAIDERRFNQIDSSYGFDNTVGPKAGAA DALISGLGDLPYLNILLMHPYSSYILPYLYNNRAYGKAYSPIAFNKAVIESLDYENPNFLAVHYCQLHWPYTSKDFISEP LENWDGNYNHYMYKEMLKSVDKQVADLFTRLKQKGMLDDAIVYIISDHGESFKLPSFETPTPQGPKVFPKTKSWGHGTNI LDQQQSLILLARAEFNNSTITSPAQKIEGLYSLVDIVPTLVSTLNISTASVSRFKGADSDGITLPWTAEQVSPKRYVFVE SSVPVKSINKSFIDKKEVMSETASNYEVRSDGKAYMRTENYIELIAKKQRAIYYQQWQLSLLPDYNSPVLLNTETNEIYD ADNYQGDFNWRPMMRELCSQYKEDPGFDQHAVCTEVNISRNSLN
Sequences:
>Translated_684_residues MSDDYGFDESRTQLLRVFFRTLAILILFTVILFNFKSSLQTYSVMSLASTMNSLDSQSLSAYGLIYDVIFFFCILIAIHI IWAAVITVSTRCPWLPIEGKKQQDLYWMLFVGLHITCLIAINSYFYPTSLVSYFRHTPVSEPLIWGGLALFLIISFYRGL ATFTSKQVVFSISLLFTVGLFIPFLSINQTNVQPQKDPNIIILGIDGLRPDHLKYMGAAPQVAPNLNRLLDNMTIYKNAY TPQGRTYVAWMSLLTGKYPINNGVRFNLAPPEMVNKTLPIIELLKERGYHTTYAIDERRFNQIDSSYGFDNTVGPKAGAA DALISGLGDLPYLNILLMHPYSSYILPYLYNNRAYGKAYSPIAFNKAVIESLDYENPNFLAVHYCQLHWPYTSKDFISEP LENWDGNYNHYMYKEMLKSVDKQVADLFTRLKQKGMLDDAIVYIISDHGESFKLPSFETPTPQGPKVFPKTKSWGHGTNI LDQQQSLILLARAEFNNSTITSPAQKIEGLYSLVDIVPTLVSTLNISTASVSRFKGADSDGITLPWTAEQVSPKRYVFVE SSVPVKSINKSFIDKKEVMSETASNYEVRSDGKAYMRTENYIELIAKKQRAIYYQQWQLSLLPDYNSPVLLNTETNEIYD ADNYQGDFNWRPMMRELCSQYKEDPGFDQHAVCTEVNISRNSLN >Mature_683_residues SDDYGFDESRTQLLRVFFRTLAILILFTVILFNFKSSLQTYSVMSLASTMNSLDSQSLSAYGLIYDVIFFFCILIAIHII WAAVITVSTRCPWLPIEGKKQQDLYWMLFVGLHITCLIAINSYFYPTSLVSYFRHTPVSEPLIWGGLALFLIISFYRGLA TFTSKQVVFSISLLFTVGLFIPFLSINQTNVQPQKDPNIIILGIDGLRPDHLKYMGAAPQVAPNLNRLLDNMTIYKNAYT PQGRTYVAWMSLLTGKYPINNGVRFNLAPPEMVNKTLPIIELLKERGYHTTYAIDERRFNQIDSSYGFDNTVGPKAGAAD ALISGLGDLPYLNILLMHPYSSYILPYLYNNRAYGKAYSPIAFNKAVIESLDYENPNFLAVHYCQLHWPYTSKDFISEPL ENWDGNYNHYMYKEMLKSVDKQVADLFTRLKQKGMLDDAIVYIISDHGESFKLPSFETPTPQGPKVFPKTKSWGHGTNIL DQQQSLILLARAEFNNSTITSPAQKIEGLYSLVDIVPTLVSTLNISTASVSRFKGADSDGITLPWTAEQVSPKRYVFVES SVPVKSINKSFIDKKEVMSETASNYEVRSDGKAYMRTENYIELIAKKQRAIYYQQWQLSLLPDYNSPVLLNTETNEIYDA DNYQGDFNWRPMMRELCSQYKEDPGFDQHAVCTEVNISRNSLN
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77915; Mature: 77784
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDYGFDESRTQLLRVFFRTLAILILFTVILFNFKSSLQTYSVMSLASTMNSLDSQSLS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYGLIYDVIFFFCILIAIHIIWAAVITVSTRCPWLPIEGKKQQDLYWMLFVGLHITCLIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH INSYFYPTSLVSYFRHTPVSEPLIWGGLALFLIISFYRGLATFTSKQVVFSISLLFTVGL HHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FIPFLSINQTNVQPQKDPNIIILGIDGLRPDHLKYMGAAPQVAPNLNRLLDNMTIYKNAY HHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHCCEEEECCC TPQGRTYVAWMSLLTGKYPINNGVRFNLAPPEMVNKTLPIIELLKERGYHTTYAIDERRF CCCCCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCHHHHHHHHHCCCCEEEEECHHHH NQIDSSYGFDNTVGPKAGAADALISGLGDLPYLNILLMHPYSSYILPYLYNNRAYGKAYS HHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHEECCCCCCCCCC PIAFNKAVIESLDYENPNFLAVHYCQLHWPYTSKDFISEPLENWDGNYNHYMYKEMLKSV CCHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH DKQVADLFTRLKQKGMLDDAIVYIISDHGESFKLPSFETPTPQGPKVFPKTKSWGHGTNI HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LDQQQSLILLARAEFNNSTITSPAQKIEGLYSLVDIVPTLVSTLNISTASVSRFKGADSD HHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC GITLPWTAEQVSPKRYVFVESSVPVKSINKSFIDKKEVMSETASNYEVRSDGKAYMRTEN CEECCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHH YIELIAKKQRAIYYQQWQLSLLPDYNSPVLLNTETNEIYDADNYQGDFNWRPMMRELCSQ HHHHHHHHHHHHEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH YKEDPGFDQHAVCTEVNISRNSLN HCCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure SDDYGFDESRTQLLRVFFRTLAILILFTVILFNFKSSLQTYSVMSLASTMNSLDSQSLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYGLIYDVIFFFCILIAIHIIWAAVITVSTRCPWLPIEGKKQQDLYWMLFVGLHITCLIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH INSYFYPTSLVSYFRHTPVSEPLIWGGLALFLIISFYRGLATFTSKQVVFSISLLFTVGL HHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FIPFLSINQTNVQPQKDPNIIILGIDGLRPDHLKYMGAAPQVAPNLNRLLDNMTIYKNAY HHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHCCEEEECCC TPQGRTYVAWMSLLTGKYPINNGVRFNLAPPEMVNKTLPIIELLKERGYHTTYAIDERRF CCCCCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCHHHHHHHHHCCCCEEEEECHHHH NQIDSSYGFDNTVGPKAGAADALISGLGDLPYLNILLMHPYSSYILPYLYNNRAYGKAYS HHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHEECCCCCCCCCC PIAFNKAVIESLDYENPNFLAVHYCQLHWPYTSKDFISEPLENWDGNYNHYMYKEMLKSV CCHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH DKQVADLFTRLKQKGMLDDAIVYIISDHGESFKLPSFETPTPQGPKVFPKTKSWGHGTNI HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LDQQQSLILLARAEFNNSTITSPAQKIEGLYSLVDIVPTLVSTLNISTASVSRFKGADSD HHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC GITLPWTAEQVSPKRYVFVESSVPVKSINKSFIDKKEVMSETASNYEVRSDGKAYMRTEN CEECCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHH YIELIAKKQRAIYYQQWQLSLLPDYNSPVLLNTETNEIYDADNYQGDFNWRPMMRELCSQ HHHHHHHHHHHHEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH YKEDPGFDQHAVCTEVNISRNSLN HCCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA