Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624213

Identifier: 167624213

GI number: 167624213

Start: 2773217

End: 2775010

Strand: Direct

Name: 167624213

Synonym: Shal_2289

Alternate gene names: NA

Gene position: 2773217-2775010 (Clockwise)

Preceding gene: 167624212

Following gene: 167624214

Centisome position: 53.06

GC content: 42.53

Gene sequence:

>1794_bases
ATGTACTACAGTTATCTCAAGATGGTTTTTTATTTAGGTAACCTTTTGACAAGCAAAGAAATTAATGTCTCTTATGCTAA
GCCCGCCCCTACTGGCATAGGGAGTGAATGCTGCAGGCTCAGTCAAATACGAGGTCTATCGCTGCTACTTGCGTTTGCAA
TTGCCGCTCGTATTCATGTAGCCCTATTTTATGAGGTTAACTGGGATGAGTTTTATTACTTATCTTTCGTATATCAATAT
GAGAACGGAGTACTTTCTGCCCAGCTTCAGACCTTTCATGTTCACTTCTTTAACTGGCTTAAGTTGATTTCCTCCAATGA
AGTCACTCAAATTAAAGCTGCGCGTTTAGTTTTAGTGATACTTCAGTCAATAACGGGTTTTTTCATTTACCGCATCGCTC
GGCGCATGCTCAGCCCAGCAGCAGCAATATTTGCCGTGCTGTGTTATTTTGCGTTTTCTTTTAACATACGAATGGGAGCA
AGTTTTCGTTCTGACCCTATCGTTACCTTTTTCTTAATGGCTAGCCTAGCGCTTGTTTTATCGGAGAAGTTGGAAATTAA
ACGTCTCGTTTTGGCTGGAGCATGTATCGCGATTGCGGTACTCATAAGCATCAAATCCCTCCTGTATTTACCCACCTTTG
GGTTAATTGCCATCGCGCTTTTTTGCGACTCACAGACTAGAAGCAAGATGATTTATCAGGTCGCTACGGTCTTAGTCGTG
GCTCTAGCGGTTTTTGTGGTGTTATATTTTTACCATGGAGCGCTTCTCAACCTTACAGACTCTCCTGCAGCCGATACCGT
TAGCCGCAGTTTTGATAAAACAATAAAAAGTGCGACCTTCCTACCGGGATTTTTCTATCTAAAATACTCTCTACTTTATG
ATCTTTTTTTCTGGATAACATTGATTTACGGTGTAAAGATTGCATGTGTCGCTCTATTGCCGAAGAAGAGATTAAGCCGA
CAAGATCAGCTTATTTTGCTCAGCTTTACCTTCCCACTCTGCACCATCTTTTTTTACCGAAATGCCTTTCCCTACTTCTA
TTCATTTATGTTAGCCCCTGCGACAGTGTTATGTGGCTTGGCGTGGGATGGGCTAAAACTAAACTCAAGAAGCAGCAAAG
AAACAACCGTGGTGACCAGCTGTATCTTATTCTTTATGGCATTAAGCATCTGCTACCATGGTTTTATTCTTCCAAAAAAG
AAACCGTTACAATCACAGCAGGAATTTGTTGACTTAGTGCATACACTTTTCCCTTCGCCCACAAGCTATATTGATTGTTG
CTCCATGATCTCTTCCTATCCTCAAGCCGGTTTTTTTATGAGTAGCTGGGGGATGGACTCTTATATTCAGGAGCAGCGGC
CTATCTTGAAAAGTTCAATAGAACGGCAACAGCCAACATTTTTAATCGCCAATAACCGCTTTCTTGATCATGCTCGTTTA
GCCGAGTTAGCAGAGCCATTACCGAAACAGCTGCTTCATCAAGATCTAACGGCCCTAGAGCAAAACTACATTCCCCATTG
GGGGGCACTTTATGTTGCTGGTAAGCATCTATACTTACAGGCTGATACCGTTGACTTTATGATTAGTATCCCCGGTGAAT
ACACCCTAGAAGGTACTCAACCCACGGTAATAGACAAACAATGGCTATCTCCAGGAGAAACGGTTTACTTAGCCTTTGGT
AAGCATATCGCTGAGCCGACTCTATTAGGTCAAGAGATCACTTTTCGCTGGGGAAACCATCTATATCGTCCGCCTTTACC
ATCCGGTTACCGACCGATTTTCACAGGGTTTTAA

Upstream 100 bases:

>100_bases
GTAACTCACTCAATTAATGTCCAACAGTTGAGCGGCAATTACTTCATTTTTCAGGGAACAAGACAGGTACGTTAGCTGTA
GCTAGCTGTTTTATAAAAAT

Downstream 100 bases:

>100_bases
CGGTAATTTTTAAGTTCATCTAGAAAGGGATCTGGAAATGAAATTAATTGTGCAAATTCCTTGTTTTAACGAAGCTGACA
ACCTACGTGACGTAATTGAT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 597; Mature: 597

Protein sequence:

>597_residues
MYYSYLKMVFYLGNLLTSKEINVSYAKPAPTGIGSECCRLSQIRGLSLLLAFAIAARIHVALFYEVNWDEFYYLSFVYQY
ENGVLSAQLQTFHVHFFNWLKLISSNEVTQIKAARLVLVILQSITGFFIYRIARRMLSPAAAIFAVLCYFAFSFNIRMGA
SFRSDPIVTFFLMASLALVLSEKLEIKRLVLAGACIAIAVLISIKSLLYLPTFGLIAIALFCDSQTRSKMIYQVATVLVV
ALAVFVVLYFYHGALLNLTDSPAADTVSRSFDKTIKSATFLPGFFYLKYSLLYDLFFWITLIYGVKIACVALLPKKRLSR
QDQLILLSFTFPLCTIFFYRNAFPYFYSFMLAPATVLCGLAWDGLKLNSRSSKETTVVTSCILFFMALSICYHGFILPKK
KPLQSQQEFVDLVHTLFPSPTSYIDCCSMISSYPQAGFFMSSWGMDSYIQEQRPILKSSIERQQPTFLIANNRFLDHARL
AELAEPLPKQLLHQDLTALEQNYIPHWGALYVAGKHLYLQADTVDFMISIPGEYTLEGTQPTVIDKQWLSPGETVYLAFG
KHIAEPTLLGQEITFRWGNHLYRPPLPSGYRPIFTGF

Sequences:

>Translated_597_residues
MYYSYLKMVFYLGNLLTSKEINVSYAKPAPTGIGSECCRLSQIRGLSLLLAFAIAARIHVALFYEVNWDEFYYLSFVYQY
ENGVLSAQLQTFHVHFFNWLKLISSNEVTQIKAARLVLVILQSITGFFIYRIARRMLSPAAAIFAVLCYFAFSFNIRMGA
SFRSDPIVTFFLMASLALVLSEKLEIKRLVLAGACIAIAVLISIKSLLYLPTFGLIAIALFCDSQTRSKMIYQVATVLVV
ALAVFVVLYFYHGALLNLTDSPAADTVSRSFDKTIKSATFLPGFFYLKYSLLYDLFFWITLIYGVKIACVALLPKKRLSR
QDQLILLSFTFPLCTIFFYRNAFPYFYSFMLAPATVLCGLAWDGLKLNSRSSKETTVVTSCILFFMALSICYHGFILPKK
KPLQSQQEFVDLVHTLFPSPTSYIDCCSMISSYPQAGFFMSSWGMDSYIQEQRPILKSSIERQQPTFLIANNRFLDHARL
AELAEPLPKQLLHQDLTALEQNYIPHWGALYVAGKHLYLQADTVDFMISIPGEYTLEGTQPTVIDKQWLSPGETVYLAFG
KHIAEPTLLGQEITFRWGNHLYRPPLPSGYRPIFTGF
>Mature_597_residues
MYYSYLKMVFYLGNLLTSKEINVSYAKPAPTGIGSECCRLSQIRGLSLLLAFAIAARIHVALFYEVNWDEFYYLSFVYQY
ENGVLSAQLQTFHVHFFNWLKLISSNEVTQIKAARLVLVILQSITGFFIYRIARRMLSPAAAIFAVLCYFAFSFNIRMGA
SFRSDPIVTFFLMASLALVLSEKLEIKRLVLAGACIAIAVLISIKSLLYLPTFGLIAIALFCDSQTRSKMIYQVATVLVV
ALAVFVVLYFYHGALLNLTDSPAADTVSRSFDKTIKSATFLPGFFYLKYSLLYDLFFWITLIYGVKIACVALLPKKRLSR
QDQLILLSFTFPLCTIFFYRNAFPYFYSFMLAPATVLCGLAWDGLKLNSRSSKETTVVTSCILFFMALSICYHGFILPKK
KPLQSQQEFVDLVHTLFPSPTSYIDCCSMISSYPQAGFFMSSWGMDSYIQEQRPILKSSIERQQPTFLIANNRFLDHARL
AELAEPLPKQLLHQDLTALEQNYIPHWGALYVAGKHLYLQADTVDFMISIPGEYTLEGTQPTVIDKQWLSPGETVYLAFG
KHIAEPTLLGQEITFRWGNHLYRPPLPSGYRPIFTGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67782; Mature: 67782

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYSYLKMVFYLGNLLTSKEINVSYAKPAPTGIGSECCRLSQIRGLSLLLAFAIAARIHV
CHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE
ALFYEVNWDEFYYLSFVYQYENGVLSAQLQTFHVHFFNWLKLISSNEVTQIKAARLVLVI
EEEEEECCCCEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LQSITGFFIYRIARRMLSPAAAIFAVLCYFAFSFNIRMGASFRSDPIVTFFLMASLALVL
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHH
SEKLEIKRLVLAGACIAIAVLISIKSLLYLPTFGLIAIALFCDSQTRSKMIYQVATVLVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ALAVFVVLYFYHGALLNLTDSPAADTVSRSFDKTIKSATFLPGFFYLKYSLLYDLFFWIT
HHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LIYGVKIACVALLPKKRLSRQDQLILLSFTFPLCTIFFYRNAFPYFYSFMLAPATVLCGL
HHHHHHHHHHHHCCHHHCCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
AWDGLKLNSRSSKETTVVTSCILFFMALSICYHGFILPKKKPLQSQQEFVDLVHTLFPSP
CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHCCCC
TSYIDCCSMISSYPQAGFFMSSWGMDSYIQEQRPILKSSIERQQPTFLIANNRFLDHARL
CHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHCCHHHHHHHHCCCCEEEECCCCHHHHHH
AELAEPLPKQLLHQDLTALEQNYIPHWGALYVAGKHLYLQADTVDFMISIPGEYTLEGTQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCEEEEEECCEEEEEECCCCEEECCCC
PTVIDKQWLSPGETVYLAFGKHIAEPTLLGQEITFRWGNHLYRPPLPSGYRPIFTGF
CCEECHHHCCCCCEEEEECCHHHCCCHHCCCHHEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYYSYLKMVFYLGNLLTSKEINVSYAKPAPTGIGSECCRLSQIRGLSLLLAFAIAARIHV
CHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE
ALFYEVNWDEFYYLSFVYQYENGVLSAQLQTFHVHFFNWLKLISSNEVTQIKAARLVLVI
EEEEEECCCCEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LQSITGFFIYRIARRMLSPAAAIFAVLCYFAFSFNIRMGASFRSDPIVTFFLMASLALVL
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHH
SEKLEIKRLVLAGACIAIAVLISIKSLLYLPTFGLIAIALFCDSQTRSKMIYQVATVLVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ALAVFVVLYFYHGALLNLTDSPAADTVSRSFDKTIKSATFLPGFFYLKYSLLYDLFFWIT
HHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LIYGVKIACVALLPKKRLSRQDQLILLSFTFPLCTIFFYRNAFPYFYSFMLAPATVLCGL
HHHHHHHHHHHHCCHHHCCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
AWDGLKLNSRSSKETTVVTSCILFFMALSICYHGFILPKKKPLQSQQEFVDLVHTLFPSP
CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHCCCC
TSYIDCCSMISSYPQAGFFMSSWGMDSYIQEQRPILKSSIERQQPTFLIANNRFLDHARL
CHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHCCHHHHHHHHCCCCEEEECCCCHHHHHH
AELAEPLPKQLLHQDLTALEQNYIPHWGALYVAGKHLYLQADTVDFMISIPGEYTLEGTQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCEEEEEECCEEEEEECCCCEEECCCC
PTVIDKQWLSPGETVYLAFGKHIAEPTLLGQEITFRWGNHLYRPPLPSGYRPIFTGF
CCEECHHHCCCCCEEEEECCHHHCCCHHCCCHHEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA