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The map label for this gene is ydjJ [C]

Identifier: 167623934

GI number: 167623934

Start: 2422839

End: 2423873

Strand: Direct

Name: ydjJ [C]

Synonym: Shal_2008

Alternate gene names: 167623934

Gene position: 2422839-2423873 (Clockwise)

Preceding gene: 167623931

Following gene: 167623935

Centisome position: 46.35

GC content: 45.12

Gene sequence:

>1035_bases
ATGAAGGCTTTGGTACTAGAAAAAGTAAATGAACTTGTCTTAAAAGAGGTCGCCACTCCAGAAGAGGTAGGCGCTAATGA
TGTGAAGATAAAAATTCAGGCTGTCGGTATTTGTGGATCAGACGTTCATTACTTATCTCATGGTCGTATTGGACATTTCA
TTGTTGAAAAGCCAATGATCCTTGGACATGAGGCTGCTGGCATCATTACTGCTGTAGGTAGCAAGGTTAAGCATCTCAAA
GAAGGTGATCGCGTGTGTATGGAGCCAGGCATACCCCAGCCACAGTCTCCTGAAACGATGGAAGGGATCTATAACCTTGA
TCCCGATGTGCAGTTTTGGGCAACACCGCCTTATGACGGTTGCTGTTCAGAGTATGTTGTTCATCCTGCAGCGTTCACTT
TTAAGATCCCTGAGCATATGAGCTATGCCGAAGGCGCTATGGTTGAGCCGTTAGCGATTGGTATGCAAGCAGTAACTAAA
GCGGACATAAAAGCTGGCGATATTGGTTTAGTTTACGGTGCTGGCACCATTGGCGTCATGTGCGCACTTTCTGCTTTAGC
CGGTGGCTGTGCAGAGGTGATCGTCGTTGATGTGGTCAATGAAAAACTGGCAACGGTTAATGATTATGAAGGCATTACTG
TCGTTAATAGCTTACACCAAGATGTGGCTGAGGTTGTTGCGGCTAAAACTGCGGGCCGTGGCGTGAATGTGGTGTTTGAA
TGTTGTGGCGTTGAGTCGGTGATTACCCATATTTGTCAGCATGTAGCACCTAATGGCACCGTGGTATTAGTGGGCATGCC
AGTTGAACCGGTTAAGTTTGACATTGTTGCGGCTCAGGTAAAAGAAATCACTTTTAAGACGATTTTCCGCTACGCCAATA
TGTATCCGAAAACCATCAATCTTATCGCTTCAGGAAAGTTAAACGTTAAGCCGTTAATCAGCCAAACCTTTAAGTTTGAA
GATTCACTAAAGGCCTATGCAAGAGCGCTTGAAGCTAACCCTTCAGATGTGAAGATCATGATTGAGATGGAGTAA

Upstream 100 bases:

>100_bases
TTTTGTGAAGATCAGCGCAAAATGATTTTTGCTAAAATATTATCTTTAAAAAAAGTGTTAATGACATCGATAACATAATT
TTGAAAGAGGGAACCATTAC

Downstream 100 bases:

>100_bases
GCGATGAGTATTGTCGCGGGTGTCGATTGTGGCACACAGGGAACCAAGGTCATTCTGGTTGATTTAAACACATCGACTGT
GTTGGCCGAGTGTTCCGCTC

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: Xylitol dehydrogenase; XDH [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MKALVLEKVNELVLKEVATPEEVGANDVKIKIQAVGICGSDVHYLSHGRIGHFIVEKPMILGHEAAGIITAVGSKVKHLK
EGDRVCMEPGIPQPQSPETMEGIYNLDPDVQFWATPPYDGCCSEYVVHPAAFTFKIPEHMSYAEGAMVEPLAIGMQAVTK
ADIKAGDIGLVYGAGTIGVMCALSALAGGCAEVIVVDVVNEKLATVNDYEGITVVNSLHQDVAEVVAAKTAGRGVNVVFE
CCGVESVITHICQHVAPNGTVVLVGMPVEPVKFDIVAAQVKEITFKTIFRYANMYPKTINLIASGKLNVKPLISQTFKFE
DSLKAYARALEANPSDVKIMIEME

Sequences:

>Translated_344_residues
MKALVLEKVNELVLKEVATPEEVGANDVKIKIQAVGICGSDVHYLSHGRIGHFIVEKPMILGHEAAGIITAVGSKVKHLK
EGDRVCMEPGIPQPQSPETMEGIYNLDPDVQFWATPPYDGCCSEYVVHPAAFTFKIPEHMSYAEGAMVEPLAIGMQAVTK
ADIKAGDIGLVYGAGTIGVMCALSALAGGCAEVIVVDVVNEKLATVNDYEGITVVNSLHQDVAEVVAAKTAGRGVNVVFE
CCGVESVITHICQHVAPNGTVVLVGMPVEPVKFDIVAAQVKEITFKTIFRYANMYPKTINLIASGKLNVKPLISQTFKFE
DSLKAYARALEANPSDVKIMIEME
>Mature_344_residues
MKALVLEKVNELVLKEVATPEEVGANDVKIKIQAVGICGSDVHYLSHGRIGHFIVEKPMILGHEAAGIITAVGSKVKHLK
EGDRVCMEPGIPQPQSPETMEGIYNLDPDVQFWATPPYDGCCSEYVVHPAAFTFKIPEHMSYAEGAMVEPLAIGMQAVTK
ADIKAGDIGLVYGAGTIGVMCALSALAGGCAEVIVVDVVNEKLATVNDYEGITVVNSLHQDVAEVVAAKTAGRGVNVVFE
CCGVESVITHICQHVAPNGTVVLVGMPVEPVKFDIVAAQVKEITFKTIFRYANMYPKTINLIASGKLNVKPLISQTFKFE
DSLKAYARALEANPSDVKIMIEME

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI156627571, Length=346, Percent_Identity=39.0173410404624, Blast_Score=247, Evalue=1e-65,
Organism=Homo sapiens, GI71565154, Length=349, Percent_Identity=26.647564469914, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1788073, Length=338, Percent_Identity=36.094674556213, Blast_Score=212, Evalue=2e-56,
Organism=Escherichia coli, GI1790045, Length=331, Percent_Identity=30.5135951661631, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1787863, Length=325, Percent_Identity=28.6153846153846, Blast_Score=121, Evalue=7e-29,
Organism=Escherichia coli, GI1788407, Length=352, Percent_Identity=26.7045454545455, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1790718, Length=314, Percent_Identity=27.7070063694268, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI87082125, Length=342, Percent_Identity=28.3625730994152, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI226510992, Length=345, Percent_Identity=27.2463768115942, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1788075, Length=324, Percent_Identity=26.2345679012346, Blast_Score=92, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17562876, Length=333, Percent_Identity=39.6396396396396, Blast_Score=255, Evalue=3e-68,
Organism=Caenorhabditis elegans, GI17562878, Length=340, Percent_Identity=39.4117647058824, Blast_Score=236, Evalue=1e-62,
Organism=Saccharomyces cerevisiae, GI6323099, Length=347, Percent_Identity=40.9221902017291, Blast_Score=272, Evalue=5e-74,
Organism=Saccharomyces cerevisiae, GI6319955, Length=346, Percent_Identity=41.0404624277457, Blast_Score=253, Evalue=2e-68,
Organism=Saccharomyces cerevisiae, GI6322619, Length=346, Percent_Identity=41.0404624277457, Blast_Score=253, Evalue=2e-68,
Organism=Saccharomyces cerevisiae, GI6319257, Length=378, Percent_Identity=25.3968253968254, Blast_Score=100, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6319258, Length=385, Percent_Identity=24.4155844155844, Blast_Score=87, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6323729, Length=298, Percent_Identity=29.1946308724832, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17137530, Length=343, Percent_Identity=37.6093294460641, Blast_Score=242, Evalue=3e-64,
Organism=Drosophila melanogaster, GI17737897, Length=344, Percent_Identity=38.6627906976744, Blast_Score=240, Evalue=1e-63,
Organism=Drosophila melanogaster, GI221457811, Length=307, Percent_Identity=28.6644951140065, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI45551930, Length=307, Percent_Identity=28.6644951140065, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI45550770, Length=307, Percent_Identity=28.6644951140065, Blast_Score=115, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR002328
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: =1.1.1.9 [H]

Molecular weight: Translated: 36893; Mature: 36893

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS00059 ADH_ZINC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALVLEKVNELVLKEVATPEEVGANDVKIKIQAVGICGSDVHYLSHGRIGHFIVEKPMI
CCCHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEEEECCCCCHHHCCCCEEEEEECCCEE
LGHEAAGIITAVGSKVKHLKEGDRVCMEPGIPQPQSPETMEGIYNLDPDVQFWATPPYDG
ECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCC
CCSEYVVHPAAFTFKIPEHMSYAEGAMVEPLAIGMQAVTKADIKAGDIGLVYGAGTIGVM
CHHHHEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH
CALSALAGGCAEVIVVDVVNEKLATVNDYEGITVVNSLHQDVAEVVAAKTAGRGVNVVFE
HHHHHHCCCHHHEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
CCGVESVITHICQHVAPNGTVVLVGMPVEPVKFDIVAAQVKEITFKTIFRYANMYPKTIN
CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEE
LIASGKLNVKPLISQTFKFEDSLKAYARALEANPSDVKIMIEME
EEECCCCCCCHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEEEC
>Mature Secondary Structure
MKALVLEKVNELVLKEVATPEEVGANDVKIKIQAVGICGSDVHYLSHGRIGHFIVEKPMI
CCCHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEEEECCCCCHHHCCCCEEEEEECCCEE
LGHEAAGIITAVGSKVKHLKEGDRVCMEPGIPQPQSPETMEGIYNLDPDVQFWATPPYDG
ECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCC
CCSEYVVHPAAFTFKIPEHMSYAEGAMVEPLAIGMQAVTKADIKAGDIGLVYGAGTIGVM
CHHHHEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH
CALSALAGGCAEVIVVDVVNEKLATVNDYEGITVVNSLHQDVAEVVAAKTAGRGVNVVFE
HHHHHHCCCHHHEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
CCGVESVITHICQHVAPNGTVVLVGMPVEPVKFDIVAAQVKEITFKTIFRYANMYPKTIN
CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEE
LIASGKLNVKPLISQTFKFEDSLKAYARALEANPSDVKIMIEME
EEECCCCCCCHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3886639 [H]