Click here to switch to the map view.

The map label for this gene is cat [H]

Identifier: 167623931

GI number: 167623931

Start: 2418903

End: 2419556

Strand: Direct

Name: cat [H]

Synonym: Shal_2005

Alternate gene names: 167623931

Gene position: 2418903-2419556 (Clockwise)

Preceding gene: 167623930

Following gene: 167623934

Centisome position: 46.28

GC content: 47.4

Gene sequence:

>654_bases
ATGAACACCTTTACAAGCTGGTTAGAGTCTAAAAAGCTAAAAGAACAAATTGTTAACCCCAATATCCAAGTCGGTGAGTA
TTCTTACTATTCGGGCTTTTATCACGGGAAGTCGTTTGAAGATCAAGCGGTGCGTTATCTACTCGGTGATGACTCAACCA
TCGATGTGTGGGAGGCTGGGGTATTTGGTGAAGTCGATAAGCTCATTATCGGTAAGTTCTGCGCTATCGCCTCGGGCGCG
TGTTTTATGCTGGCCGGTAATCAGGGCCATCGGCTCGATTGGATCTCAACCTATCCTTTCTCAGCCGAAGAGTTTGGTGA
TGGGGTGAAGAGTGGCTTTGAGCGCGCTGGCGATACGGTTATTGGCAACGATGTATGGATCGGTAGTGAAGCGATGATCA
TGCCTGGTGTGACCATAGGTGATGGCGCGGTGATTGGGGCGAGGGCTGTGATCAGTAAAGATGTCGCGCCTTACAGTGTG
GTGGTGGGCAGTAATAAACTGGTGAAGCAGCGATTTCCCAGTGAGTCAGTCGAAAAACTACAACAGATAAAGTGGTGGGA
TTGGCCGTTAGAAAAGCTTCAAGTTGCGATGCCTATTCTATGCAGTGGTGATATCGACGCTTTGCATCAATATTATCTAG
AGCAAATGAAATAA

Upstream 100 bases:

>100_bases
AAGGGTTAAGAGGCTACTTGAAACTGCAAAGTGGATATGGACTAACCATCTCTGATTATAATCATTTTGATAATGCTGTA
GGCATTGGTATTGCACTTTA

Downstream 100 bases:

>100_bases
AAAATGGCGCTAACCACTGGGGTTAGCGCCATTTTATTATGGGGTTTACGGGGTATTTTACATCGCCGTATTCAAGAGAT
ATCGATTACGCTAATTTTTG

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MNTFTSWLESKKLKEQIVNPNIQVGEYSYYSGFYHGKSFEDQAVRYLLGDDSTIDVWEAGVFGEVDKLIIGKFCAIASGA
CFMLAGNQGHRLDWISTYPFSAEEFGDGVKSGFERAGDTVIGNDVWIGSEAMIMPGVTIGDGAVIGARAVISKDVAPYSV
VVGSNKLVKQRFPSESVEKLQQIKWWDWPLEKLQVAMPILCSGDIDALHQYYLEQMK

Sequences:

>Translated_217_residues
MNTFTSWLESKKLKEQIVNPNIQVGEYSYYSGFYHGKSFEDQAVRYLLGDDSTIDVWEAGVFGEVDKLIIGKFCAIASGA
CFMLAGNQGHRLDWISTYPFSAEEFGDGVKSGFERAGDTVIGNDVWIGSEAMIMPGVTIGDGAVIGARAVISKDVAPYSV
VVGSNKLVKQRFPSESVEKLQQIKWWDWPLEKLQVAMPILCSGDIDALHQYYLEQMK
>Mature_217_residues
MNTFTSWLESKKLKEQIVNPNIQVGEYSYYSGFYHGKSFEDQAVRYLLGDDSTIDVWEAGVFGEVDKLIIGKFCAIASGA
CFMLAGNQGHRLDWISTYPFSAEEFGDGVKSGFERAGDTVIGNDVWIGSEAMIMPGVTIGDGAVIGARAVISKDVAPYSV
VVGSNKLVKQRFPSESVEKLQQIKWWDWPLEKLQVAMPILCSGDIDALHQYYLEQMK

Specific function: This enzyme is an effector of chloramphenicol resistance in bacteria [H]

COG id: COG0110

COG function: function code R; Acetyltransferase (isoleucine patch superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1786664, Length=120, Percent_Identity=36.6666666666667, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001451
- InterPro:   IPR018357
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00132 Hexapep [H]

EC number: =2.3.1.28 [H]

Molecular weight: Translated: 24097; Mature: 24097

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFTSWLESKKLKEQIVNPNIQVGEYSYYSGFYHGKSFEDQAVRYLLGDDSTIDVWEAG
CCHHHHHHHHHHHHHHHCCCCCEECCCHHHCCCCCCCCCHHHHHHHHHCCCCEEEHCCCC
VFGEVDKLIIGKFCAIASGACFMLAGNQGHRLDWISTYPFSAEEFGDGVKSGFERAGDTV
CCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCHHHHCCHHHHHHHHCCCEE
IGNDVWIGSEAMIMPGVTIGDGAVIGARAVISKDVAPYSVVVGSNKLVKQRFPSESVEKL
ECCCEEECCCCEEECCEEECCCCEEHHHHHHHCCCCCEEEEECCCHHHHHHCCHHHHHHH
QQIKWWDWPLEKLQVAMPILCSGDIDALHQYYLEQMK
HHCCCCCCCHHHHHHHHCEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNTFTSWLESKKLKEQIVNPNIQVGEYSYYSGFYHGKSFEDQAVRYLLGDDSTIDVWEAG
CCHHHHHHHHHHHHHHHCCCCCEECCCHHHCCCCCCCCCHHHHHHHHHCCCCEEEHCCCC
VFGEVDKLIIGKFCAIASGACFMLAGNQGHRLDWISTYPFSAEEFGDGVKSGFERAGDTV
CCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCHHHHCCHHHHHHHHCCCEE
IGNDVWIGSEAMIMPGVTIGDGAVIGARAVISKDVAPYSVVVGSNKLVKQRFPSESVEKL
ECCCEEECCCCEEECCEEECCCCEEHHHHHHHCCCCCEEEEECCCHHHHHHCCHHHHHHH
QQIKWWDWPLEKLQVAMPILCSGDIDALHQYYLEQMK
HHCCCCCCCHHHHHHHHCEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA