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The map label for this gene is xylB [H]

Identifier: 167623935

GI number: 167623935

Start: 2423877

End: 2425424

Strand: Direct

Name: xylB [H]

Synonym: Shal_2009

Alternate gene names: 167623935

Gene position: 2423877-2425424 (Clockwise)

Preceding gene: 167623934

Following gene: 167623936

Centisome position: 46.37

GC content: 47.03

Gene sequence:

>1548_bases
ATGAGTATTGTCGCGGGTGTCGATTGTGGCACACAGGGAACCAAGGTCATTCTGGTTGATTTAAACACATCGACTGTGTT
GGCCGAGTGTTCCGCTCCCCATGAACTGATCTCACAGTCAAACGGCCGAAGAGAGCAACAACCTATATGGTGGATTGATG
CCATGGTTAATGCTTTTGAGAAAGCAATAACGGCAGCAAAGATAGATCCGAAAACCATTGCAGCTATAGGTGTGTCTGGT
CAGCAACATGGCCTAGTTGCATTGGATAGCCAAGGTGATGTGATCCGTCCAGCTAAGCTCTGGTGTGATACAGAAACGGC
GCCAGAGAATGCAGAGCTATTACAGATGCTTGGTGGCGAGCAGGCGTGTATCGATAGGTTGGGGCTTCGAGTTGAAACTG
GCTATACCGCATCAAAGATCCTGTGGATGAAGAATCATGAGCCGGAAAATTTTGCCAAGATTGCTCATATTTTGTTACCT
CATGATTACCTGAATTTCTGGCTTACGGGCGAGTTAAGCGCTGAATATGGTGATGCATCAGGCACAGGCTTATTTAATGT
GCGTAATCGCTGCTGGGATGAACATGTTTGCTCAGTTATCGATCCTACTGGCAATTTATTTAAGGCGTTGCCGGCGTTAA
ATAGTGCAGAAAAACCAGCCGGAGTTGTTATTGGGCAGGCTAAAGAGCGTTTAGGCTTGAATGATAACGTGGTGGTCTCT
TGTGGTGGTGGTGACAATATGATGGGCGCTATCGGCACCGGCAATGTAAAAAACGGCATCATCACTATGTCACTGGGAAC
GTCGGGCACTATCTACACCTTTTCAGATAAACCCGTTGAGCTGAAACACCCTAGTATCGCTAATTTCTGCTCAAGCTCAA
ATGGTTGGATGCCGCTGATCTGCACCATGAATGTCACCTCTGCCACGAGTTTAGTGCAAGACGTTTTAACGATGAACCTG
ACTGAATTTAATCAGTCTCTTGAAGCGAGCCACATTGGTGCAGGTAATATTTCATTCCTGCAATTCTTTAATGGCGAGCG
TGTTCCCGCGCTTCCTGACGGCAAAGCCTCAATTCATGGCTTAGATGCGGCAAACTTTACTCGTGACAACTTAGTACGCT
CGGTGGTTGAAGGTGCGACGTATGGCCTTAAATATGGTCTAGAGCTGCTACGTGATGCTGGGATCAATATTGAGCAAATT
CGCTTAATTGGTGGCGGGGCTAAGTCAGGTCAATGGCGTCAAATGATTGCAGATACCATGAACTGCGAGGTCATATGCCC
TGAGGTGGAGGAGGCGGCTGCGCTTGGGGCTGCGATTCAGGCTTCTTGGGCGCTTAATGGTGAGCTTGGTACCGGTCTTA
TTGATCAATTGATTGTACTCAATGAAGACAGTCGCACATTGCCAATTTCTGGCAATGTTGAGCAGTATGAGATGGCGTAT
CAGCGCTATATGAGTACGCTGTTTAATCAATATCCGCAATTGAACGACTCTCAGTTGAAAGAGCAGCAATTGAACGCTCG
ACAACAGGTTGGGAGTTATGATGAATAA

Upstream 100 bases:

>100_bases
CAGCCAAACCTTTAAGTTTGAAGATTCACTAAAGGCCTATGCAAGAGCGCTTGAAGCTAACCCTTCAGATGTGAAGATCA
TGATTGAGATGGAGTAAGCG

Downstream 100 bases:

>100_bases
GCCTCCTTTACTCTCAGTCAATTCCATTAAAAAGTCTTTCGGTGAGGTTAATGCGCTTAAGCACATTAACTTCACTCTTA
ATGCGGGCGAAATACATGCA

Product: xylulokinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MSIVAGVDCGTQGTKVILVDLNTSTVLAECSAPHELISQSNGRREQQPIWWIDAMVNAFEKAITAAKIDPKTIAAIGVSG
QQHGLVALDSQGDVIRPAKLWCDTETAPENAELLQMLGGEQACIDRLGLRVETGYTASKILWMKNHEPENFAKIAHILLP
HDYLNFWLTGELSAEYGDASGTGLFNVRNRCWDEHVCSVIDPTGNLFKALPALNSAEKPAGVVIGQAKERLGLNDNVVVS
CGGGDNMMGAIGTGNVKNGIITMSLGTSGTIYTFSDKPVELKHPSIANFCSSSNGWMPLICTMNVTSATSLVQDVLTMNL
TEFNQSLEASHIGAGNISFLQFFNGERVPALPDGKASIHGLDAANFTRDNLVRSVVEGATYGLKYGLELLRDAGINIEQI
RLIGGGAKSGQWRQMIADTMNCEVICPEVEEAAALGAAIQASWALNGELGTGLIDQLIVLNEDSRTLPISGNVEQYEMAY
QRYMSTLFNQYPQLNDSQLKEQQLNARQQVGSYDE

Sequences:

>Translated_515_residues
MSIVAGVDCGTQGTKVILVDLNTSTVLAECSAPHELISQSNGRREQQPIWWIDAMVNAFEKAITAAKIDPKTIAAIGVSG
QQHGLVALDSQGDVIRPAKLWCDTETAPENAELLQMLGGEQACIDRLGLRVETGYTASKILWMKNHEPENFAKIAHILLP
HDYLNFWLTGELSAEYGDASGTGLFNVRNRCWDEHVCSVIDPTGNLFKALPALNSAEKPAGVVIGQAKERLGLNDNVVVS
CGGGDNMMGAIGTGNVKNGIITMSLGTSGTIYTFSDKPVELKHPSIANFCSSSNGWMPLICTMNVTSATSLVQDVLTMNL
TEFNQSLEASHIGAGNISFLQFFNGERVPALPDGKASIHGLDAANFTRDNLVRSVVEGATYGLKYGLELLRDAGINIEQI
RLIGGGAKSGQWRQMIADTMNCEVICPEVEEAAALGAAIQASWALNGELGTGLIDQLIVLNEDSRTLPISGNVEQYEMAY
QRYMSTLFNQYPQLNDSQLKEQQLNARQQVGSYDE
>Mature_514_residues
SIVAGVDCGTQGTKVILVDLNTSTVLAECSAPHELISQSNGRREQQPIWWIDAMVNAFEKAITAAKIDPKTIAAIGVSGQ
QHGLVALDSQGDVIRPAKLWCDTETAPENAELLQMLGGEQACIDRLGLRVETGYTASKILWMKNHEPENFAKIAHILLPH
DYLNFWLTGELSAEYGDASGTGLFNVRNRCWDEHVCSVIDPTGNLFKALPALNSAEKPAGVVIGQAKERLGLNDNVVVSC
GGGDNMMGAIGTGNVKNGIITMSLGTSGTIYTFSDKPVELKHPSIANFCSSSNGWMPLICTMNVTSATSLVQDVLTMNLT
EFNQSLEASHIGAGNISFLQFFNGERVPALPDGKASIHGLDAANFTRDNLVRSVVEGATYGLKYGLELLRDAGINIEQIR
LIGGGAKSGQWRQMIADTMNCEVICPEVEEAAALGAAIQASWALNGELGTGLIDQLIVLNEDSRTLPISGNVEQYEMAYQ
RYMSTLFNQYPQLNDSQLKEQQLNARQQVGSYDE

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI18860918, Length=519, Percent_Identity=22.9287090558767, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI42794763, Length=459, Percent_Identity=22.8758169934641, Blast_Score=66, Evalue=8e-11,
Organism=Escherichia coli, GI1789987, Length=500, Percent_Identity=31.6, Blast_Score=182, Evalue=5e-47,
Organism=Escherichia coli, GI1790005, Length=492, Percent_Identity=25, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1787789, Length=419, Percent_Identity=25.7756563245823, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1790361, Length=456, Percent_Identity=22.3684210526316, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17554530, Length=537, Percent_Identity=21.2290502793296, Blast_Score=85, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6321633, Length=401, Percent_Identity=26.4339152119701, Blast_Score=91, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21356607, Length=497, Percent_Identity=24.748490945674, Blast_Score=98, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 55615; Mature: 55483

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS00933 FGGY_KINASES_1 ; PS00445 FGGY_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVAGVDCGTQGTKVILVDLNTSTVLAECSAPHELISQSNGRREQQPIWWIDAMVNAFE
CCEEEECCCCCCCCEEEEEECCCCEEEEECCCCHHHHHCCCCCCCCCCEEHHHHHHHHHH
KAITAAKIDPKTIAAIGVSGQQHGLVALDSQGDVIRPAKLWCDTETAPENAELLQMLGGE
HHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCEECCHHEEECCCCCCCHHHHHHHHCCC
QACIDRLGLRVETGYTASKILWMKNHEPENFAKIAHILLPHDYLNFWLTGELSAEYGDAS
HHHHHHCCCEEECCCCEEEEEEEECCCCHHHHHHHHHHCCCHHHEEEEEEEECCCCCCCC
GTGLFNVRNRCWDEHVCSVIDPTGNLFKALPALNSAEKPAGVVIGQAKERLGLNDNVVVS
CCEEEHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCCCCCEEEECHHHHCCCCCCEEEE
CGGGDNMMGAIGTGNVKNGIITMSLGTSGTIYTFSDKPVELKHPSIANFCSSSNGWMPLI
ECCCCCCEEEECCCCCCCCEEEEEECCCCEEEEECCCCEEECCCCHHHHHCCCCCCEEEE
CTMNVTSATSLVQDVLTMNLTEFNQSLEASHIGAGNISFLQFFNGERVPALPDGKASIHG
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEE
LDAANFTRDNLVRSVVEGATYGLKYGLELLRDAGINIEQIRLIGGGAKSGQWRQMIADTM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCC
NCEVICPEVEEAAALGAAIQASWALNGELGTGLIDQLIVLNEDSRTLPISGNVEQYEMAY
CCEEECCCHHHHHHHHHHEEEEEEECCCCCCCHHHEEEEECCCCCEECCCCCHHHHHHHH
QRYMSTLFNQYPQLNDSQLKEQQLNARQQVGSYDE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SIVAGVDCGTQGTKVILVDLNTSTVLAECSAPHELISQSNGRREQQPIWWIDAMVNAFE
CEEEECCCCCCCCEEEEEECCCCEEEEECCCCHHHHHCCCCCCCCCCEEHHHHHHHHHH
KAITAAKIDPKTIAAIGVSGQQHGLVALDSQGDVIRPAKLWCDTETAPENAELLQMLGGE
HHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCEECCHHEEECCCCCCCHHHHHHHHCCC
QACIDRLGLRVETGYTASKILWMKNHEPENFAKIAHILLPHDYLNFWLTGELSAEYGDAS
HHHHHHCCCEEECCCCEEEEEEEECCCCHHHHHHHHHHCCCHHHEEEEEEEECCCCCCCC
GTGLFNVRNRCWDEHVCSVIDPTGNLFKALPALNSAEKPAGVVIGQAKERLGLNDNVVVS
CCEEEHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCCCCCEEEECHHHHCCCCCCEEEE
CGGGDNMMGAIGTGNVKNGIITMSLGTSGTIYTFSDKPVELKHPSIANFCSSSNGWMPLI
ECCCCCCEEEECCCCCCCCEEEEEECCCCEEEEECCCCEEECCCCHHHHHCCCCCCEEEE
CTMNVTSATSLVQDVLTMNLTEFNQSLEASHIGAGNISFLQFFNGERVPALPDGKASIHG
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEE
LDAANFTRDNLVRSVVEGATYGLKYGLELLRDAGINIEQIRLIGGGAKSGQWRQMIADTM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCC
NCEVICPEVEEAAALGAAIQASWALNGELGTGLIDQLIVLNEDSRTLPISGNVEQYEMAY
CCEEECCCHHHHHHHHHHEEEEEEECCCCCCCHHHEEEEECCCCCEECCCCCHHHHHHHH
QRYMSTLFNQYPQLNDSQLKEQQLNARQQVGSYDE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]