| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623838
Identifier: 167623838
GI number: 167623838
Start: 2290987
End: 2291253
Strand: Direct
Name: 167623838
Synonym: Shal_1908
Alternate gene names: NA
Gene position: 2290987-2291253 (Clockwise)
Preceding gene: 167623836
Following gene: 167623839
Centisome position: 43.83
GC content: 46.44
Gene sequence:
>267_bases ATGCAGATCCCACCGAGTATTATCTCTGGGCAGAATGGTTTTCAGTCTGCGCAGTCAGACTTAACTCAAGCAACGGTTGA TGTTGCTGGTGCAAGTCAATCAGCTGCAGGCACGACGACTGTTGATAGTAGCAGTACTAATGCTAGTGCTAGTGCATCCG AAGCATTAGTCGATGCGACTCAAGCGGTTATTCATGCTCAGGCGTCGGCAGAGGTGATACAAACCTCATCAGATATGATA GGCAACATAATCAATATTAAGGTGTAG
Upstream 100 bases:
>100_bases CATTATTGCTGCAGACTTTATAAACGAGTTTGTCACTGTACTTTATTCAAATTTTAGATAATAATTGAGCAAATAAGTTC CTATTTATAAGGGCGATGTT
Downstream 100 bases:
>100_bases GTCATTTTAACTACATCTAACCCTTCAAACTGAACTCGTAAAAAGTATTCGTCACTCGTTAAAAGTACATTTTATAGACT AATATCCCTTATCTTTTTGA
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MQIPPSIISGQNGFQSAQSDLTQATVDVAGASQSAAGTTTVDSSSTNASASASEALVDATQAVIHAQASAEVIQTSSDMI GNIINIKV
Sequences:
>Translated_88_residues MQIPPSIISGQNGFQSAQSDLTQATVDVAGASQSAAGTTTVDSSSTNASASASEALVDATQAVIHAQASAEVIQTSSDMI GNIINIKV >Mature_88_residues MQIPPSIISGQNGFQSAQSDLTQATVDVAGASQSAAGTTTVDSSSTNASASASEALVDATQAVIHAQASAEVIQTSSDMI GNIINIKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8736; Mature: 8736
Theoretical pI: Translated: 3.69; Mature: 3.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIPPSIISGQNGFQSAQSDLTQATVDVAGASQSAAGTTTVDSSSTNASASASEALVDAT CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QAVIHAQASAEVIQTSSDMIGNIINIKV HHHHHHHHHHHHHHCCHHHHCCEEEECC >Mature Secondary Structure MQIPPSIISGQNGFQSAQSDLTQATVDVAGASQSAAGTTTVDSSSTNASASASEALVDAT CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QAVIHAQASAEVIQTSSDMIGNIINIKV HHHHHHHHHHHHHHCCHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA