| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is hisC [H]
Identifier: 167623752
GI number: 167623752
Start: 2178188
End: 2179321
Strand: Reverse
Name: hisC [H]
Synonym: Shal_1822
Alternate gene names: 167623752
Gene position: 2179321-2178188 (Counterclockwise)
Preceding gene: 167623753
Following gene: 167623751
Centisome position: 41.69
GC content: 46.38
Gene sequence:
>1134_bases ATGATAACTTCAGGGATAACTTCATACACTAGTTCAGAGTCAAGTTTAGAGACAACGTCAAGCAAGCTGAATTTGGCGCA GCGTCTCGCGAGACCGGAACTATTAGCGTTACAGGTTTATCAATCAGCAAGACGTATTGGCGGCCAGGGGGATATCTGGA TCAATGCCAATGAATCCCCCTTTAACAATAGTGAACTAGTCGGCCTCAACCGTTACCCTGAGTGCCAGCCACCTGCATTA TTACGTGCGTATAGCCAATATAGTGGTGTAAATGAGAACAGCATTATCACAAGCCGCGGCGCCGACGAAGCGATTGAGCT GCTAATTCGTGCCTTCTGTGTACCAGGGCAAGATAGCATCGCAACCTTCGGCCCAACATATGGCATGTATGCCATCAGTG CCCAAACCTTCAATGTTGGGGTAAAAGCGCTGTCACTAACAGATGATTTTCAGCTCCCCACTGATTACCTAACTCAAGTC AGTGGCGCTAAGCTGGTATTTATCTGTAACCCAAACAATCCCACAGGCAGTGTGATCCCAAGAAGTAAAATCATCGAAGT TATCGAGCGCTGCCAAAACGCTATCGTGGTTGTCGATGAGGCTTACATTGAGTTTAGCCCAGAGTACAGTGTGGCCGATT TAGTTGCCAGCTATGCAAATCTTGTGGTGCTTCGCACCTTATCAAAAGCGTTTTCCTTAGCTGGTGCGCGCTGTGGTTTT ATGTTGGCAAATCCTGACATTATCGACATTTGCATGCGAGTCATTGCTCCTTATCCAGTGCCACTTCCTGTGAGCGAACT CGCTATCAAAGCCCTGAACACCAGTGGCCTTGAAACCATGAGGCAACAGGTTAATGTAATGAAGCAACAGGGATTAAGGT TGGCAGAAACATTATGCGATTATGGCGCCAACGTTATCAAAGCACATGGTAACTATCTGCTCGCAGAGTTTGATGACAAA GCGCAGGTGCAACAAATGCTCACAACCGCTGGCGTAATCGCTAGAAGCTATAACGATCCTCGTCTGAATAAGGCGATTCG CTTTAGCTTTACTGATCAGGCGCAAACAGACTATCTCATCAATCTGTTTCAACAGCCGTTTCAACAATCGGTTTCAACAA CAGAATATAAGTAA
Upstream 100 bases:
>100_bases ATGCCATTGCAGTTCGAATTGCCAGCCTTGACGCTAATGTAGATAACGAAGAGTTCGCCAGCAAGGGCGCAGATAAAGCG AACTCGATTAAGGAGGCGCT
Downstream 100 bases:
>100_bases GCTGACGTTTAAAAGAATAACAATAGCTTGGCTGAGTATTAAATGAGTTTCGACTTGTTTAACCTTGTTTTAACTCAGTT AAGCCAGAATCTGAAAGGTA
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MITSGITSYTSSESSLETTSSKLNLAQRLARPELLALQVYQSARRIGGQGDIWINANESPFNNSELVGLNRYPECQPPAL LRAYSQYSGVNENSIITSRGADEAIELLIRAFCVPGQDSIATFGPTYGMYAISAQTFNVGVKALSLTDDFQLPTDYLTQV SGAKLVFICNPNNPTGSVIPRSKIIEVIERCQNAIVVVDEAYIEFSPEYSVADLVASYANLVVLRTLSKAFSLAGARCGF MLANPDIIDICMRVIAPYPVPLPVSELAIKALNTSGLETMRQQVNVMKQQGLRLAETLCDYGANVIKAHGNYLLAEFDDK AQVQQMLTTAGVIARSYNDPRLNKAIRFSFTDQAQTDYLINLFQQPFQQSVSTTEYK
Sequences:
>Translated_377_residues MITSGITSYTSSESSLETTSSKLNLAQRLARPELLALQVYQSARRIGGQGDIWINANESPFNNSELVGLNRYPECQPPAL LRAYSQYSGVNENSIITSRGADEAIELLIRAFCVPGQDSIATFGPTYGMYAISAQTFNVGVKALSLTDDFQLPTDYLTQV SGAKLVFICNPNNPTGSVIPRSKIIEVIERCQNAIVVVDEAYIEFSPEYSVADLVASYANLVVLRTLSKAFSLAGARCGF MLANPDIIDICMRVIAPYPVPLPVSELAIKALNTSGLETMRQQVNVMKQQGLRLAETLCDYGANVIKAHGNYLLAEFDDK AQVQQMLTTAGVIARSYNDPRLNKAIRFSFTDQAQTDYLINLFQQPFQQSVSTTEYK >Mature_377_residues MITSGITSYTSSESSLETTSSKLNLAQRLARPELLALQVYQSARRIGGQGDIWINANESPFNNSELVGLNRYPECQPPAL LRAYSQYSGVNENSIITSRGADEAIELLIRAFCVPGQDSIATFGPTYGMYAISAQTFNVGVKALSLTDDFQLPTDYLTQV SGAKLVFICNPNNPTGSVIPRSKIIEVIERCQNAIVVVDEAYIEFSPEYSVADLVASYANLVVLRTLSKAFSLAGARCGF MLANPDIIDICMRVIAPYPVPLPVSELAIKALNTSGLETMRQQVNVMKQQGLRLAETLCDYGANVIKAHGNYLLAEFDDK AQVQQMLTTAGVIARSYNDPRLNKAIRFSFTDQAQTDYLINLFQQPFQQSVSTTEYK
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=345, Percent_Identity=43.4782608695652, Blast_Score=281, Evalue=4e-77, Organism=Saccharomyces cerevisiae, GI6322075, Length=374, Percent_Identity=31.0160427807487, Blast_Score=159, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 41395; Mature: 41395
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITSGITSYTSSESSLETTSSKLNLAQRLARPELLALQVYQSARRIGGQGDIWINANESP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCC FNNSELVGLNRYPECQPPALLRAYSQYSGVNENSIITSRGADEAIELLIRAFCVPGQDSI CCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCC ATFGPTYGMYAISAQTFNVGVKALSLTDDFQLPTDYLTQVSGAKLVFICNPNNPTGSVIP EECCCCCCEEEEEEEEEECCEEEEEECCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCC RSKIIEVIERCQNAIVVVDEAYIEFSPEYSVADLVASYANLVVLRTLSKAFSLAGARCGF HHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE MLANPDIIDICMRVIAPYPVPLPVSELAIKALNTSGLETMRQQVNVMKQQGLRLAETLCD EECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHH YGANVIKAHGNYLLAEFDDKAQVQQMLTTAGVIARSYNDPRLNKAIRFSFTDQAQTDYLI CCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHH NLFQQPFQQSVSTTEYK HHHHHHHHHHCCCCCCC >Mature Secondary Structure MITSGITSYTSSESSLETTSSKLNLAQRLARPELLALQVYQSARRIGGQGDIWINANESP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCC FNNSELVGLNRYPECQPPALLRAYSQYSGVNENSIITSRGADEAIELLIRAFCVPGQDSI CCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCC ATFGPTYGMYAISAQTFNVGVKALSLTDDFQLPTDYLTQVSGAKLVFICNPNNPTGSVIP EECCCCCCEEEEEEEEEECCEEEEEECCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCC RSKIIEVIERCQNAIVVVDEAYIEFSPEYSVADLVASYANLVVLRTLSKAFSLAGARCGF HHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE MLANPDIIDICMRVIAPYPVPLPVSELAIKALNTSGLETMRQQVNVMKQQGLRLAETLCD EECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHH YGANVIKAHGNYLLAEFDDKAQVQQMLTTAGVIARSYNDPRLNKAIRFSFTDQAQTDYLI CCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHH NLFQQPFQQSVSTTEYK HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]