Click here to switch to the map view.

The map label for this gene is 167623670

Identifier: 167623670

GI number: 167623670

Start: 2085801

End: 2086673

Strand: Reverse

Name: 167623670

Synonym: Shal_1739

Alternate gene names: NA

Gene position: 2086673-2085801 (Counterclockwise)

Preceding gene: 167623671

Following gene: 167623669

Centisome position: 39.92

GC content: 40.32

Gene sequence:

>873_bases
ATGGTTAAAAGTTTCATCATTTGCGGCGCTGCCACGCTCACTTTGGTCGCAAGCCCTTTAACGTTTGCTGATAACGATAC
CGTTATCAGGATTGGTGGCTTTTATGCGAATACGGATTCAACCATAGATGTTAACGACCCAATTCTAGGTAATGCCTTTA
AACTCGATTTCGAAACCGATTTAAAGCTAGAAGAGTCACAATTTTTGCCTTTCTTTGAAATCTCTCATCATTTTAATGAT
CGCCACACCTTATACGCAGATTGGAAACAGTTACACCGTACCGCTTTGGTTCAGTCTGTTGAAAAACCTTTTCAGTTTAC
CTGGGATGACACCACATACGATATTAAGTCGGGCATAGCTCTAGATAGTACACTCAACATAGATATTATGCGCATTGGCT
ATGGCTATGACATTTGGCAAGGGCATAACTACGACGTTGGCGTTTCTGTTGGTTTACATGCCATGTTTATCAAAACTGCT
TTTAAAGGCAATATTGGGATCTGTGAGATAGATACTGAAACTCGCTGCCCAGATACCATAGAAATCCCTAAAGTTGTTGA
TGAAAAGCTCACTGCACCACTACCAGATATTGGTGTTTACGGTGCTTACGAGTTCTATCCTGGCTTTAAATTCAATGCTC
ATGCTCAGTATTTTTATATAAAGTTAGACGATTTAAAAGGCGGATTAGTCGATGTGAGAATGGGTGTTGAAGCTGCGATA
AGTGAAAATTGGCATATGACAGCAGCATTTAACTATTACGAAGTCGACGTTGAATACACGTCAACGATTACAGCTGCCGA
TATCAAGATTGCAGATTACAACATCTATTACAGCTTTATCGGTCCGATGCTTTCAGTCAGTTACCAGTTCTAG

Upstream 100 bases:

>100_bases
CATTTTATTCACATCCAGAAAGATCCTGCTATGCTAGAAACAAAATAATAAAAGCTCTATGAATTTAGACTAATAAAAAA
GAAAGACGGAGTTACTTTTA

Downstream 100 bases:

>100_bases
TTCTAAAAGAATTAAGTTATCACGACACAAAAAGGCCCCTTTCGGTGCCTTTTTGTTGTTAAGCGTTTAGGGGGCAGCAG
CAAACTTAGCGACGATATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MVKSFIICGAATLTLVASPLTFADNDTVIRIGGFYANTDSTIDVNDPILGNAFKLDFETDLKLEESQFLPFFEISHHFND
RHTLYADWKQLHRTALVQSVEKPFQFTWDDTTYDIKSGIALDSTLNIDIMRIGYGYDIWQGHNYDVGVSVGLHAMFIKTA
FKGNIGICEIDTETRCPDTIEIPKVVDEKLTAPLPDIGVYGAYEFYPGFKFNAHAQYFYIKLDDLKGGLVDVRMGVEAAI
SENWHMTAAFNYYEVDVEYTSTITAADIKIADYNIYYSFIGPMLSVSYQF

Sequences:

>Translated_290_residues
MVKSFIICGAATLTLVASPLTFADNDTVIRIGGFYANTDSTIDVNDPILGNAFKLDFETDLKLEESQFLPFFEISHHFND
RHTLYADWKQLHRTALVQSVEKPFQFTWDDTTYDIKSGIALDSTLNIDIMRIGYGYDIWQGHNYDVGVSVGLHAMFIKTA
FKGNIGICEIDTETRCPDTIEIPKVVDEKLTAPLPDIGVYGAYEFYPGFKFNAHAQYFYIKLDDLKGGLVDVRMGVEAAI
SENWHMTAAFNYYEVDVEYTSTITAADIKIADYNIYYSFIGPMLSVSYQF
>Mature_290_residues
MVKSFIICGAATLTLVASPLTFADNDTVIRIGGFYANTDSTIDVNDPILGNAFKLDFETDLKLEESQFLPFFEISHHFND
RHTLYADWKQLHRTALVQSVEKPFQFTWDDTTYDIKSGIALDSTLNIDIMRIGYGYDIWQGHNYDVGVSVGLHAMFIKTA
FKGNIGICEIDTETRCPDTIEIPKVVDEKLTAPLPDIGVYGAYEFYPGFKFNAHAQYFYIKLDDLKGGLVDVRMGVEAAI
SENWHMTAAFNYYEVDVEYTSTITAADIKIADYNIYYSFIGPMLSVSYQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32800; Mature: 32800

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSFIICGAATLTLVASPLTFADNDTVIRIGGFYANTDSTIDVNDPILGNAFKLDFETD
CCCEEEEECCCEEEEEECCCEECCCCCEEEEEEEEECCCCEEECCCCCCCCEEEEEECCC
LKLEESQFLPFFEISHHFNDRHTLYADWKQLHRTALVQSVEKPFQFTWDDTTYDIKSGIA
CEECHHHCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCEE
LDSTLNIDIMRIGYGYDIWQGHNYDVGVSVGLHAMFIKTAFKGNIGICEIDTETRCPDTI
ECCCCCEEEEEEECCEEECCCCCEEEEEECCEEEEEEEHHHCCCCEEEEECCCCCCCCCE
EIPKVVDEKLTAPLPDIGVYGAYEFYPGFKFNAHAQYFYIKLDDLKGGLVDVRMGVEAAI
ECHHHHHHHHCCCCCCCCCCEEEECCCCCEECCCEEEEEEEEECCCCCEEEEEECCEEEC
SENWHMTAAFNYYEVDVEYTSTITAADIKIADYNIYYSFIGPMLSVSYQF
CCCEEEEEEEEEEEEEEEECCEEEEEEEEEEEEEEEEEECCCCEEEEECC
>Mature Secondary Structure
MVKSFIICGAATLTLVASPLTFADNDTVIRIGGFYANTDSTIDVNDPILGNAFKLDFETD
CCCEEEEECCCEEEEEECCCEECCCCCEEEEEEEEECCCCEEECCCCCCCCEEEEEECCC
LKLEESQFLPFFEISHHFNDRHTLYADWKQLHRTALVQSVEKPFQFTWDDTTYDIKSGIA
CEECHHHCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCEE
LDSTLNIDIMRIGYGYDIWQGHNYDVGVSVGLHAMFIKTAFKGNIGICEIDTETRCPDTI
ECCCCCEEEEEEECCEEECCCCCEEEEEECCEEEEEEEHHHCCCCEEEEECCCCCCCCCE
EIPKVVDEKLTAPLPDIGVYGAYEFYPGFKFNAHAQYFYIKLDDLKGGLVDVRMGVEAAI
ECHHHHHHHHCCCCCCCCCCEEEECCCCCEECCCEEEEEEEEECCCCCEEEEEECCEEEC
SENWHMTAAFNYYEVDVEYTSTITAADIKIADYNIYYSFIGPMLSVSYQF
CCCEEEEEEEEEEEEEEEECCEEEEEEEEEEEEEEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA