| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is dgkA [H]
Identifier: 167623671
GI number: 167623671
Start: 2087135
End: 2087506
Strand: Reverse
Name: dgkA [H]
Synonym: Shal_1740
Alternate gene names: 167623671
Gene position: 2087506-2087135 (Counterclockwise)
Preceding gene: 167623673
Following gene: 167623670
Centisome position: 39.94
GC content: 43.82
Gene sequence:
>372_bases ATGAAACCAGCTAACAATAACGGAATTAAACGCGTCATTAGAGCCACAGGCTTTTCAATGCAAGGTCTAAAATTGGCCTG GAAACACGAGGCGGCGTTCAGACAAGAGTTAGTCTTGGCTGCTATTATGCTACCTATAGCACTTTTAGTAGATGTGAGTA CTGTAGAGCGTGTTCTACTCATTATGGGACTATTTATGGTATTGATTGTTGAGCTGCTTAACTCTGCGATCGAAGCTGTA GTAGATAGGATTAGCGATGAGTTTCATCCACTGAGTGGCCAAGCAAAAGATATTGCCTCAGCTGCCGTCTTCATGAGCTT AGCTTTTTGCGGATTAACTTGGGCGCTGATCTTGCTGCCCCTACTCTTCTAA
Upstream 100 bases:
>100_bases AAGTTGAACATGTTATACTTCGTCAAAATCTGAATCGTCTGTCTAAAGATATTGCAATCAACTCGCTATCGCACATGATG GATTATTATTACGGAATACT
Downstream 100 bases:
>100_bases TCGGCTGATGTGATTGAGTAATTAAATTTGAACTAACGCCTTTGATTAAAGGCGTTTGAATTAAAGCCTGTTTAATAGCA ATATTTTAGTAGCATCCACA
Product: diacylglycerol kinase
Products: NA
Alternate protein names: DAGK; Diglyceride kinase; DGK [H]
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKPANNNGIKRVIRATGFSMQGLKLAWKHEAAFRQELVLAAIMLPIALLVDVSTVERVLLIMGLFMVLIVELLNSAIEAV VDRISDEFHPLSGQAKDIASAAVFMSLAFCGLTWALILLPLLF
Sequences:
>Translated_123_residues MKPANNNGIKRVIRATGFSMQGLKLAWKHEAAFRQELVLAAIMLPIALLVDVSTVERVLLIMGLFMVLIVELLNSAIEAV VDRISDEFHPLSGQAKDIASAAVFMSLAFCGLTWALILLPLLF >Mature_123_residues MKPANNNGIKRVIRATGFSMQGLKLAWKHEAAFRQELVLAAIMLPIALLVDVSTVERVLLIMGLFMVLIVELLNSAIEAV VDRISDEFHPLSGQAKDIASAAVFMSLAFCGLTWALILLPLLF
Specific function: Recycling of diacylglycerol produced during the turnover of membrane phospholipid [H]
COG id: COG0818
COG function: function code M; Diacylglycerol kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial diacylglycerol kinase family [H]
Homologues:
Organism=Escherichia coli, GI1790475, Length=116, Percent_Identity=50.8620689655172, Blast_Score=121, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000829 [H]
Pfam domain/function: PF01219 DAGK_prokar [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 13462; Mature: 13462
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: PS01069 DAGK_PROKAR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPANNNGIKRVIRATGFSMQGLKLAWKHEAAFRQELVLAAIMLPIALLVDVSTVERVLL CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMGLFMVLIVELLNSAIEAVVDRISDEFHPLSGQAKDIASAAVFMSLAFCGLTWALILLP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLF HHC >Mature Secondary Structure MKPANNNGIKRVIRATGFSMQGLKLAWKHEAAFRQELVLAAIMLPIALLVDVSTVERVLL CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMGLFMVLIVELLNSAIEAVVDRISDEFHPLSGQAKDIASAAVFMSLAFCGLTWALILLP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLF HHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]