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The map label for this gene is vdlD [H]

Identifier: 167623633

GI number: 167623633

Start: 2043462

End: 2043884

Strand: Reverse

Name: vdlD [H]

Synonym: Shal_1702

Alternate gene names: 167623633

Gene position: 2043884-2043462 (Counterclockwise)

Preceding gene: 167623634

Following gene: 167623632

Centisome position: 39.1

GC content: 43.97

Gene sequence:

>423_bases
ATGCCTTTATCTCAAACTCCCACGCAATTTCCCGAAGACGTTGCCCTTCGAATCGAACAATCTGAAGCTCGCGTTATCAA
AGCAGTGTTCCCCTCTATTACTAATCATCACAATACCTTATTTGGTGGTGAGGCTTTAGCCTGGATGGATGAAACCGCCT
TTATCGCTGCAACCCGCTTTTGCCGCAAAACCTTAGTGACGGTGAGCTCTGATAGAATTGATTTTAACAAGCCTATCCCT
GCGGGCTCATTAGCCGAAATTATTGCTAGAGTCATTCATGTAGGCAACACCTCAATCAAAGTTGAAGTAAACATTTTTGT
TGAGGACATGTATCAAGATCTAAGAGAGCACGCTATTCGTGGCGTATTTACTTTCGTTGCAGTTGATGAACAGAGAAAGC
CCACAGCTGTTTGGCCGCTATAA

Upstream 100 bases:

>100_bases
AACCACTCTATTTATTCAAGCTAAAGCTCGCCTAATCTGTTATTAAATTACAAAAACAGCTACAATATTGTACTTCAAAT
GCATAACCATAGGTTGCCGT

Downstream 100 bases:

>100_bases
ACAGGCAGAAAGAAACTCAGTCAGGGCCTGTTTTTTGGTCCTGTGCTTTTCCGGACCGACTGCGTTCACGTATTAAAGCC
ATCACATTTTTTGCTTTAGA

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MPLSQTPTQFPEDVALRIEQSEARVIKAVFPSITNHHNTLFGGEALAWMDETAFIAATRFCRKTLVTVSSDRIDFNKPIP
AGSLAEIIARVIHVGNTSIKVEVNIFVEDMYQDLREHAIRGVFTFVAVDEQRKPTAVWPL

Sequences:

>Translated_140_residues
MPLSQTPTQFPEDVALRIEQSEARVIKAVFPSITNHHNTLFGGEALAWMDETAFIAATRFCRKTLVTVSSDRIDFNKPIP
AGSLAEIIARVIHVGNTSIKVEVNIFVEDMYQDLREHAIRGVFTFVAVDEQRKPTAVWPL
>Mature_139_residues
PLSQTPTQFPEDVALRIEQSEARVIKAVFPSITNHHNTLFGGEALAWMDETAFIAATRFCRKTLVTVSSDRIDFNKPIPA
GSLAEIIARVIHVGNTSIKVEVNIFVEDMYQDLREHAIRGVFTFVAVDEQRKPTAVWPL

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 15708; Mature: 15577

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSQTPTQFPEDVALRIEQSEARVIKAVFPSITNHHNTLFGGEALAWMDETAFIAATRF
CCCCCCCCCCCHHHHEEEECCHHHHHHHHHHHHCCCCCEEECCCEEEHHCCHHHHHHHHH
CRKTLVTVSSDRIDFNKPIPAGSLAEIIARVIHVGNTSIKVEVNIFVEDMYQDLREHAIR
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHH
GVFTFVAVDEQRKPTAVWPL
HHHHEEEECCCCCCCCCCCC
>Mature Secondary Structure 
PLSQTPTQFPEDVALRIEQSEARVIKAVFPSITNHHNTLFGGEALAWMDETAFIAATRF
CCCCCCCCCCHHHHEEEECCHHHHHHHHHHHHCCCCCEEECCCEEEHHCCHHHHHHHHH
CRKTLVTVSSDRIDFNKPIPAGSLAEIIARVIHVGNTSIKVEVNIFVEDMYQDLREHAIR
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHH
GVFTFVAVDEQRKPTAVWPL
HHHHEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]