| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is aroH [H]
Identifier: 167623634
GI number: 167623634
Start: 2044154
End: 2045215
Strand: Reverse
Name: aroH [H]
Synonym: Shal_1703
Alternate gene names: 167623634
Gene position: 2045215-2044154 (Counterclockwise)
Preceding gene: 167623635
Following gene: 167623633
Centisome position: 39.13
GC content: 44.73
Gene sequence:
>1062_bases ATGACCATTAAAACAGACGAACTACGCACCTCCCTTTTATGTAAGGTAATTTCACCTGCACAACTCGCTTCTGAATATCC TTTAACACAAGATGCCGCTGACTACCTAGTCCAGCAACGCAATGAAGTTGAAGCCATTATTAATGGTGAAGACCAACGTT TACTTGTGATTATTGGTCCATGTTCAATCCACGACACAGAAGCCGCGCTCGATTACGCTCAGCGCCTAGCTAAGCTTCAC CAGCAATATAAAGATGATTTATGCATCTTAATGCGCGTTTACTTTGAGAAGCCTCGTACCACAGTTGGCTGGAAAGGGCT TATTTCTGACCCAGACCTAGATGGCAGTTTTAGCCCTAATAAAGGCCTACGTAAAGCGCGTCACCTATTGCAACAAATTA CAGAACTGAAGTTGCCTATCGCGACTGAGTTTTTAGATATGGTTAACGGTCAGTATATTGCCGACTTGATTACTTGGGGT GCTATTGGTGCTCGTACCACTGAAAGTCAAATTCACCGCGAGATGGCTTCAGCGCTTTCTTGCCCGGTAGGCTTTAAAAA TGGTACCGATGGCAATATCGATATTGCAGTTGATGCCGTTCGCGCCGCGCAAGCACCGCACATCTTCTACTCACCAGATA AAGATGGTGCTATGGCTGTTTACCGTACTCATGGTAACCCATTTGGTCACATTATTTTACGTGGTGGTAAAGAGCCAAAC TACCATAGCGACGATATTCAAAAAGTAGCGAAACAGCTCAAGAGCGTGGGTGTCACCCAGCGTATGGTTGTCGACTTTAG CCATGGTAACAGCCGCAAGATGCATAAAGAACAGCTTAATGTTGCAGAGTCTATTATGCAGCAGATGGTTAATGGCGAAA CCGCTATCGCCGGCATTATGGCTGAAAGCTTTATCGAAGAAGGTAACCAAAAAGTGGTTGCTGGCGAGCAGCTCACATAC GGTAAGAGTATTACAGATGCTTGTATCCACTGGGAAGACTCAGAAATCTTACTTCGTGATTTAGCCAAAGCATCACGTGT GAGAATGGAATTGCTAAAATAA
Upstream 100 bases:
>100_bases TAGCGTCACTTTTAAGGCAATTGCCACTGTGCACAGCCAAACTATTAGTTATAATCCGAAGTAATCAGGCTAAAGCCCAT ACGAACGCTCGGTATTTTGA
Downstream 100 bases:
>100_bases CAGTAAGGGTAAGACCAGTAATTTAGCTTAACTTAAAGAAAACGTACCCACTCACTAAGTCGGTACGTTTTTTTATTACA CTTTTTATCAAGTTCACTAT
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MTIKTDELRTSLLCKVISPAQLASEYPLTQDAADYLVQQRNEVEAIINGEDQRLLVIIGPCSIHDTEAALDYAQRLAKLH QQYKDDLCILMRVYFEKPRTTVGWKGLISDPDLDGSFSPNKGLRKARHLLQQITELKLPIATEFLDMVNGQYIADLITWG AIGARTTESQIHREMASALSCPVGFKNGTDGNIDIAVDAVRAAQAPHIFYSPDKDGAMAVYRTHGNPFGHIILRGGKEPN YHSDDIQKVAKQLKSVGVTQRMVVDFSHGNSRKMHKEQLNVAESIMQQMVNGETAIAGIMAESFIEEGNQKVVAGEQLTY GKSITDACIHWEDSEILLRDLAKASRVRMELLK
Sequences:
>Translated_353_residues MTIKTDELRTSLLCKVISPAQLASEYPLTQDAADYLVQQRNEVEAIINGEDQRLLVIIGPCSIHDTEAALDYAQRLAKLH QQYKDDLCILMRVYFEKPRTTVGWKGLISDPDLDGSFSPNKGLRKARHLLQQITELKLPIATEFLDMVNGQYIADLITWG AIGARTTESQIHREMASALSCPVGFKNGTDGNIDIAVDAVRAAQAPHIFYSPDKDGAMAVYRTHGNPFGHIILRGGKEPN YHSDDIQKVAKQLKSVGVTQRMVVDFSHGNSRKMHKEQLNVAESIMQQMVNGETAIAGIMAESFIEEGNQKVVAGEQLTY GKSITDACIHWEDSEILLRDLAKASRVRMELLK >Mature_352_residues TIKTDELRTSLLCKVISPAQLASEYPLTQDAADYLVQQRNEVEAIINGEDQRLLVIIGPCSIHDTEAALDYAQRLAKLHQ QYKDDLCILMRVYFEKPRTTVGWKGLISDPDLDGSFSPNKGLRKARHLLQQITELKLPIATEFLDMVNGQYIADLITWGA IGARTTESQIHREMASALSCPVGFKNGTDGNIDIAVDAVRAAQAPHIFYSPDKDGAMAVYRTHGNPFGHIILRGGKEPNY HSDDIQKVAKQLKSVGVTQRMVVDFSHGNSRKMHKEQLNVAESIMQQMVNGETAIAGIMAESFIEEGNQKVVAGEQLTYG KSITDACIHWEDSEILLRDLAKASRVRMELLK
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787996, Length=346, Percent_Identity=63.2947976878613, Blast_Score=471, Evalue=1e-134, Organism=Escherichia coli, GI1786969, Length=348, Percent_Identity=54.8850574712644, Blast_Score=400, Evalue=1e-113, Organism=Escherichia coli, GI1788953, Length=327, Percent_Identity=50.7645259938838, Blast_Score=346, Evalue=1e-96, Organism=Saccharomyces cerevisiae, GI6319726, Length=339, Percent_Identity=51.3274336283186, Blast_Score=338, Evalue=7e-94, Organism=Saccharomyces cerevisiae, GI6320240, Length=343, Percent_Identity=48.9795918367347, Blast_Score=334, Evalue=2e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 39261; Mature: 39130
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKTDELRTSLLCKVISPAQLASEYPLTQDAADYLVQQRNEVEAIINGEDQRLLVIIGP CCCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCHHEEECCCCCEEEEEEEC CSIHDTEAALDYAQRLAKLHQQYKDDLCILMRVYFEKPRTTVGWKGLISDPDLDGSFSPN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC KGLRKARHLLQQITELKLPIATEFLDMVNGQYIADLITWGAIGARTTESQIHREMASALS HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC CPVGFKNGTDGNIDIAVDAVRAAQAPHIFYSPDKDGAMAVYRTHGNPFGHIILRGGKEPN CCCCCCCCCCCCEEEEEEHHHHCCCCEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCC YHSDDIQKVAKQLKSVGVTQRMVVDFSHGNSRKMHKEQLNVAESIMQQMVNGETAIAGIM CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH AESFIEEGNQKVVAGEQLTYGKSITDACIHWEDSEILLRDLAKASRVRMELLK HHHHHHCCCCEEEECCCEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TIKTDELRTSLLCKVISPAQLASEYPLTQDAADYLVQQRNEVEAIINGEDQRLLVIIGP CCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCHHEEECCCCCEEEEEEEC CSIHDTEAALDYAQRLAKLHQQYKDDLCILMRVYFEKPRTTVGWKGLISDPDLDGSFSPN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC KGLRKARHLLQQITELKLPIATEFLDMVNGQYIADLITWGAIGARTTESQIHREMASALS HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC CPVGFKNGTDGNIDIAVDAVRAAQAPHIFYSPDKDGAMAVYRTHGNPFGHIILRGGKEPN CCCCCCCCCCCCEEEEEEHHHHCCCCEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCC YHSDDIQKVAKQLKSVGVTQRMVVDFSHGNSRKMHKEQLNVAESIMQQMVNGETAIAGIM CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH AESFIEEGNQKVVAGEQLTYGKSITDACIHWEDSEILLRDLAKASRVRMELLK HHHHHHCCCCEEEECCCEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]