| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is trpE [H]
Identifier: 167623589
GI number: 167623589
Start: 1988317
End: 1989909
Strand: Reverse
Name: trpE [H]
Synonym: Shal_1658
Alternate gene names: 167623589
Gene position: 1989909-1988317 (Counterclockwise)
Preceding gene: 167623595
Following gene: 167623588
Centisome position: 38.07
GC content: 49.22
Gene sequence:
>1593_bases ATGGAACACACTATCGCTAAGGTTATCACCCAAAAAGAAGCGCTGGCGTATCATGACGATCCACTTAGTCTATACCAGGA TGTGACTCAAGATGCCCCTCACACCATGCTGCTAGAGTCGGCTGAAATAGACAGCAAAGATCACCTAAAGAGTATCGTAT TAACTCACGCAGCAATGATGATCCGTTGCAGTGGCTACCAGCTTGAGTTTAGCGCGTTAACAGACAATGGTAAGACACTA CTCGCGCCAATCAAGTCCTTTTTCGAGCAAACTTTTCTGGCCACGGAAATTAACCATATTAATGGATCAAGCCTAAGCCT AACGCTACAAAAAGAGTCTAATCAACTCGATGAAGACGCTCGCCTAAAGTCAACCTCTCCTCTCGATGGCCTGCGAGCGC TAGTTAAGCACATTCGCTGCGATGAAAGCCCCGAGTTTGAAGATCTGTTTCTAGGTGGCGTACTCTCCTATGACTTAATC GATACCGTCGAGCCACTGCCAAGCGTGCCAGAAGGCGATAACACCTGCCCTGACTATCTATTTTATCTCGCCGAAACCTT AATTCTTGTGGATCATCAGCTACAAAGCGCCGAAATTGTGACTCACCAATTTGTGCTGCCAGGCTACAACAGCTTAAACA AGCACTCAGACAAGAGTGCGGCACAGCTTGCAACCCGCATGAGCAAGCTGCAACAAAAGTGTCATTCACTCGCGCCCATT GCCGAGCTACTAGGTGTCGATGCCGAGACTCAGGTTAATATTTCAGACAATGACTTCAAAGACACGGTCAACAGCCTAAA AGAGCACATCGTCGCTGGCGATATTTTCCAAGTGGTTCCATCGCGCAGTTTCAGCCTACCTTGCCCCAATACATTAGGTG CCTATCGCGCACTAAGGCTGACAAACCCAAGCCCTTACATGTTCTACTTTCGCGGCGATGACTTTACCTTGTTTGGCGCC TCACCAGAAAGTGCCCTTAAGTATGAGGCGAAGAGCAATCAGGTTGAGATCTACCCGATTGCCGGAACACGTAAACGTGG CAAAACCGCCAGCGGTGATATTGATTTTGATCTCGATAGCCGTAACGAGCTTGAACTGCGCCTAGATAAAAAAGAGCTGT CTGAGCACATCATGTTGGTGGACTTGGCTCGCAACGATATCGCTCGCATCAGCCAAAGTGGTACTCGCAAAGTACCTGAG CTACTAAAGGTGGATAGATACTCCCATGTAATGCACCTCGTTAGCCGCGTCACAGGCCAGCTTCGATCCGATTTAGATGC ACTGCATGCCTATCAAGCTTGCATGAATATGGGCACCTTAACTGGCGCGCCAAAAGTGAGTGCCGCTCAGCTGATTCGCG GCGCTGAAAAAACACGTCGTGGCAGCTACGGCGGTGCGGTCGGTTACCTCAATGGTCTTGGTGATATGGATACCTGTATT GTAATCCGCTCAGCCTTTGTTAAAAACGACATCGCCTACATTCAAGCCGGAGCCGGCGTGGTATTTGATTCAGACCCTCA GGCGGAAGCCGATGAAACCCGCCAAAAGGCACAAGCGGTTATTTCAGCCATTAAGATGGGAGGTGGGCTATGA
Upstream 100 bases:
>100_bases TAATAAAATAAGCAAGAAGATAGAAAACTCGCAGCGGCAGGCTAGAAAAGTGAGATAAAACAATGAACAATGCATTACCC TACAAGGCAGGAGCATAAGC
Downstream 100 bases:
>100_bases AAATCTATCTGTTAGATAACTTTGACTCCTTCACTTACAACCTAGTCGATCAGTTTAGAAGTCTAGGCTACGAAGTGGTG ATTTATCGTAATGATGTCGA
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MEHTIAKVITQKEALAYHDDPLSLYQDVTQDAPHTMLLESAEIDSKDHLKSIVLTHAAMMIRCSGYQLEFSALTDNGKTL LAPIKSFFEQTFLATEINHINGSSLSLTLQKESNQLDEDARLKSTSPLDGLRALVKHIRCDESPEFEDLFLGGVLSYDLI DTVEPLPSVPEGDNTCPDYLFYLAETLILVDHQLQSAEIVTHQFVLPGYNSLNKHSDKSAAQLATRMSKLQQKCHSLAPI AELLGVDAETQVNISDNDFKDTVNSLKEHIVAGDIFQVVPSRSFSLPCPNTLGAYRALRLTNPSPYMFYFRGDDFTLFGA SPESALKYEAKSNQVEIYPIAGTRKRGKTASGDIDFDLDSRNELELRLDKKELSEHIMLVDLARNDIARISQSGTRKVPE LLKVDRYSHVMHLVSRVTGQLRSDLDALHAYQACMNMGTLTGAPKVSAAQLIRGAEKTRRGSYGGAVGYLNGLGDMDTCI VIRSAFVKNDIAYIQAGAGVVFDSDPQAEADETRQKAQAVISAIKMGGGL
Sequences:
>Translated_530_residues MEHTIAKVITQKEALAYHDDPLSLYQDVTQDAPHTMLLESAEIDSKDHLKSIVLTHAAMMIRCSGYQLEFSALTDNGKTL LAPIKSFFEQTFLATEINHINGSSLSLTLQKESNQLDEDARLKSTSPLDGLRALVKHIRCDESPEFEDLFLGGVLSYDLI DTVEPLPSVPEGDNTCPDYLFYLAETLILVDHQLQSAEIVTHQFVLPGYNSLNKHSDKSAAQLATRMSKLQQKCHSLAPI AELLGVDAETQVNISDNDFKDTVNSLKEHIVAGDIFQVVPSRSFSLPCPNTLGAYRALRLTNPSPYMFYFRGDDFTLFGA SPESALKYEAKSNQVEIYPIAGTRKRGKTASGDIDFDLDSRNELELRLDKKELSEHIMLVDLARNDIARISQSGTRKVPE LLKVDRYSHVMHLVSRVTGQLRSDLDALHAYQACMNMGTLTGAPKVSAAQLIRGAEKTRRGSYGGAVGYLNGLGDMDTCI VIRSAFVKNDIAYIQAGAGVVFDSDPQAEADETRQKAQAVISAIKMGGGL >Mature_530_residues MEHTIAKVITQKEALAYHDDPLSLYQDVTQDAPHTMLLESAEIDSKDHLKSIVLTHAAMMIRCSGYQLEFSALTDNGKTL LAPIKSFFEQTFLATEINHINGSSLSLTLQKESNQLDEDARLKSTSPLDGLRALVKHIRCDESPEFEDLFLGGVLSYDLI DTVEPLPSVPEGDNTCPDYLFYLAETLILVDHQLQSAEIVTHQFVLPGYNSLNKHSDKSAAQLATRMSKLQQKCHSLAPI AELLGVDAETQVNISDNDFKDTVNSLKEHIVAGDIFQVVPSRSFSLPCPNTLGAYRALRLTNPSPYMFYFRGDDFTLFGA SPESALKYEAKSNQVEIYPIAGTRKRGKTASGDIDFDLDSRNELELRLDKKELSEHIMLVDLARNDIARISQSGTRKVPE LLKVDRYSHVMHLVSRVTGQLRSDLDALHAYQACMNMGTLTGAPKVSAAQLIRGAEKTRRGSYGGAVGYLNGLGDMDTCI VIRSAFVKNDIAYIQAGAGVVFDSDPQAEADETRQKAQAVISAIKMGGGL
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787518, Length=510, Percent_Identity=53.5294117647059, Blast_Score=504, Evalue=1e-144, Organism=Escherichia coli, GI1788114, Length=425, Percent_Identity=30.1176470588235, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI87082077, Length=267, Percent_Identity=27.3408239700375, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1786809, Length=228, Percent_Identity=28.9473684210526, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320935, Length=407, Percent_Identity=37.8378378378378, Blast_Score=226, Evalue=5e-60, Organism=Saccharomyces cerevisiae, GI6324361, Length=231, Percent_Identity=25.5411255411255, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005257 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 58333; Mature: 58333
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHTIAKVITQKEALAYHDDPLSLYQDVTQDAPHTMLLESAEIDSKDHLKSIVLTHAAMM CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH IRCSGYQLEFSALTDNGKTLLAPIKSFFEQTFLATEINHINGSSLSLTLQKESNQLDEDA HEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHH RLKSTSPLDGLRALVKHIRCDESPEFEDLFLGGVLSYDLIDTVEPLPSVPEGDNTCPDYL HCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH FYLAETLILVDHQLQSAEIVTHQFVLPGYNSLNKHSDKSAAQLATRMSKLQQKCHSLAPI HHHHHHHHHHHCCCCHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AELLGVDAETQVNISDNDFKDTVNSLKEHIVAGDIFQVVPSRSFSLPCPNTLGAYRALRL HHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEEE TNPSPYMFYFRGDDFTLFGASPESALKYEAKSNQVEIYPIAGTRKRGKTASGDIDFDLDS CCCCCEEEEEECCCEEEECCCCHHHHEEECCCCEEEEEECCCCCCCCCCCCCCEEECCCC RNELELRLDKKELSEHIMLVDLARNDIARISQSGTRKVPELLKVDRYSHVMHLVSRVTGQ CCCEEEEECHHHHHCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LRSDLDALHAYQACMNMGTLTGAPKVSAAQLIRGAEKTRRGSYGGAVGYLNGLGDMDTCI HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHH VIRSAFVKNDIAYIQAGAGVVFDSDPQAEADETRQKAQAVISAIKMGGGL HHHHHHHHCCHHEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEHTIAKVITQKEALAYHDDPLSLYQDVTQDAPHTMLLESAEIDSKDHLKSIVLTHAAMM CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH IRCSGYQLEFSALTDNGKTLLAPIKSFFEQTFLATEINHINGSSLSLTLQKESNQLDEDA HEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHH RLKSTSPLDGLRALVKHIRCDESPEFEDLFLGGVLSYDLIDTVEPLPSVPEGDNTCPDYL HCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH FYLAETLILVDHQLQSAEIVTHQFVLPGYNSLNKHSDKSAAQLATRMSKLQQKCHSLAPI HHHHHHHHHHHCCCCHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AELLGVDAETQVNISDNDFKDTVNSLKEHIVAGDIFQVVPSRSFSLPCPNTLGAYRALRL HHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEEE TNPSPYMFYFRGDDFTLFGASPESALKYEAKSNQVEIYPIAGTRKRGKTASGDIDFDLDS CCCCCEEEEEECCCEEEECCCCHHHHEEECCCCEEEEEECCCCCCCCCCCCCCEEECCCC RNELELRLDKKELSEHIMLVDLARNDIARISQSGTRKVPELLKVDRYSHVMHLVSRVTGQ CCCEEEEECHHHHHCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LRSDLDALHAYQACMNMGTLTGAPKVSAAQLIRGAEKTRRGSYGGAVGYLNGLGDMDTCI HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHH VIRSAFVKNDIAYIQAGAGVVFDSDPQAEADETRQKAQAVISAIKMGGGL HHHHHHHHCCHHEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]