Click here to switch to the map view.

The map label for this gene is 167623595

Identifier: 167623595

GI number: 167623595

Start: 1993934

End: 1994518

Strand: Reverse

Name: 167623595

Synonym: Shal_1664

Alternate gene names: NA

Gene position: 1994518-1993934 (Counterclockwise)

Preceding gene: 167623597

Following gene: 167623589

Centisome position: 38.16

GC content: 41.2

Gene sequence:

>585_bases
ATGGAAGCCAACGCCTTACCTAATGATATCGGAACCAAAATAGCCTCATCACTCATCGAAAACTTAGATGCGGCCAACTT
CTGTGGCCAGGTTCATCGAAACCTTCAACATATATCGCCGACTAGAGAACGAATACTCGATCGACTCATCGTGCATAAAT
TTGAGGAGTACTACGCTCAGGTTATTGAGATGATTTCAGGAAAAAAGCATAGAGCTAGGCGCATTGGCGAGTTATTTGAT
GTTATTCCTCGAGGAGAGTGTCTGGATCTATTCTTATCTTTGATCAAAGAACACTGTATGGGTACGGAGCAAATAAGAAA
ATACACCCAAGACATAGACTTACTAGCACTGAGATTTTCCGAACAGACCGGGATCCAATGGGAGCAACTATATGCTAGCG
ATGAATATGAAGCCTGTATGTCAGGGTTATTTTCGATAATTTTCCACCACCTTATCGATAGAAGCGTCCCCATCCCCGCA
CTAAATACAAAGCTAAATGATAAATATCAAGCCGAAAAGATCAATAAACTACTACGCCATATGAGCAAGTTGTGGTTGAA
TCAACATCATGACTACTCAATATAG

Upstream 100 bases:

>100_bases
CAATTTGAAATGTTCAAAAAAAGGTTCTTGCCAATTTCCCTGTAATGGCAAGCTTCCGCCACGTTTTGATTGCTATATCG
CGCTTGGCATAGATAAGGTC

Downstream 100 bases:

>100_bases
GCGTTTATCCAGCAAGGCCTTTGTCTATTACATTACCCATCATCGAGCCTCATCGCCTCTTTGATTTCATCACAGCTAAA
GCCTTTACGAGATAAGTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MEANALPNDIGTKIASSLIENLDAANFCGQVHRNLQHISPTRERILDRLIVHKFEEYYAQVIEMISGKKHRARRIGELFD
VIPRGECLDLFLSLIKEHCMGTEQIRKYTQDIDLLALRFSEQTGIQWEQLYASDEYEACMSGLFSIIFHHLIDRSVPIPA
LNTKLNDKYQAEKINKLLRHMSKLWLNQHHDYSI

Sequences:

>Translated_194_residues
MEANALPNDIGTKIASSLIENLDAANFCGQVHRNLQHISPTRERILDRLIVHKFEEYYAQVIEMISGKKHRARRIGELFD
VIPRGECLDLFLSLIKEHCMGTEQIRKYTQDIDLLALRFSEQTGIQWEQLYASDEYEACMSGLFSIIFHHLIDRSVPIPA
LNTKLNDKYQAEKINKLLRHMSKLWLNQHHDYSI
>Mature_194_residues
MEANALPNDIGTKIASSLIENLDAANFCGQVHRNLQHISPTRERILDRLIVHKFEEYYAQVIEMISGKKHRARRIGELFD
VIPRGECLDLFLSLIKEHCMGTEQIRKYTQDIDLLALRFSEQTGIQWEQLYASDEYEACMSGLFSIIFHHLIDRSVPIPA
LNTKLNDKYQAEKINKLLRHMSKLWLNQHHDYSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22606; Mature: 22606

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEANALPNDIGTKIASSLIENLDAANFCGQVHRNLQHISPTRERILDRLIVHKFEEYYAQ
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VIEMISGKKHRARRIGELFDVIPRGECLDLFLSLIKEHCMGTEQIRKYTQDIDLLALRFS
HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
EQTGIQWEQLYASDEYEACMSGLFSIIFHHLIDRSVPIPALNTKLNDKYQAEKINKLLRH
HHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
MSKLWLNQHHDYSI
HHHHHHHCCCCCCC
>Mature Secondary Structure
MEANALPNDIGTKIASSLIENLDAANFCGQVHRNLQHISPTRERILDRLIVHKFEEYYAQ
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VIEMISGKKHRARRIGELFDVIPRGECLDLFLSLIKEHCMGTEQIRKYTQDIDLLALRFS
HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
EQTGIQWEQLYASDEYEACMSGLFSIIFHHLIDRSVPIPALNTKLNDKYQAEKINKLLRH
HHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
MSKLWLNQHHDYSI
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA