| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is ylxH [H]
Identifier: 167623395
GI number: 167623395
Start: 1762410
End: 1763309
Strand: Direct
Name: ylxH [H]
Synonym: Shal_1464
Alternate gene names: 167623395
Gene position: 1762410-1763309 (Clockwise)
Preceding gene: 167623394
Following gene: 167623396
Centisome position: 33.72
GC content: 46.89
Gene sequence:
>900_bases ATGCATTTGAGTAAAGCCATGACTCCGGATCAAGCAAGCGGTTTACGTATGATGAATCAGCCAAATAATGAAAAAGTAAA AGTAATCGCCGTATCAGGTGGTAAAGGTGGCGTTGGTAAAACCAGCGTGTCAATTAATACCGCCGTCGCGTTAGCCGAAA AGGGTAAACGTGTGTTGGTATTAGACGCCGATTTAGGTCTAGCGAACGTCGATGTGATGTTAGGTTTGCGCGCAGAGCGA AATTTATCTCATGTTTTGTCGGGAGAGGCCGAATTAGATGATGTGATCTTAAGAGGACCTAAAGGGATTGGTATTATTCC TGCCACTTCGGGGACTCAGGCAATGGTCGAACTGACTCAAGCTCAGCATGCTGGTCTTATTCGTGCGTTTAGCGAAATGA GAACCCAGTTTGATATCTTGATTGTCGATACCGCTGCTGGCATTTCTGATATGGTACTGAGCTTTTCACGGGCGTCACAA GATGTATTAATTGTGGTGTGTGATGAGCCAACGTCGATCACCGATGCCTACGCCTTGATTAAGATTTTAAGTCGTGAACA CGGGGTGTTCCGCTTTAAGATTGTCGCGAACATGGTACGCAGCTTACGGGAAGGCATGGAGCTTTTTGCCAAGTTAAGCA AGGTGACCGACAGGTTCCTTGATGTGGCGTTAGAGCTTGTGGCCACGGTGCCATTTGATGAGAATTTACGTAAGTCTGTA CGTAAGCAGAAATTGATTGTTGAGGCGTTTCCTAAGTCGCCAGCAGCCATTGCATACCAAGGGTTAGCGAATAAGGTTAT GAGCTGGCCAGTCCCGTCACAACCCGGTGGCCATTTAGAGTTCTTCGTTGAGCGTTTGGTGCAGCGTCCAAGCTATCAAG AGGATAAGTCGGGTGAATAA
Upstream 100 bases:
>100_bases GTGGCTGATACATTATCGTTAGCCAATCGTGCATTAGCAGCATTAGATAACAAACCTACCGAACCAATACATAATAGTGA AGGGTCGCAAGAGATGACCT
Downstream 100 bases:
>100_bases AGCGGCAGCGTATACTCGTTTTGATAATAAGACGTCTATCGTTGAACAGTATGCACCGCTTGTAAAAAGAATAGCCCATC ATCTTTTGGCTCGTTTACCC
Product: cobyrinic acid ac-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MHLSKAMTPDQASGLRMMNQPNNEKVKVIAVSGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGLRAER NLSHVLSGEAELDDVILRGPKGIGIIPATSGTQAMVELTQAQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQ DVLIVVCDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATVPFDENLRKSV RKQKLIVEAFPKSPAAIAYQGLANKVMSWPVPSQPGGHLEFFVERLVQRPSYQEDKSGE
Sequences:
>Translated_299_residues MHLSKAMTPDQASGLRMMNQPNNEKVKVIAVSGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGLRAER NLSHVLSGEAELDDVILRGPKGIGIIPATSGTQAMVELTQAQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQ DVLIVVCDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATVPFDENLRKSV RKQKLIVEAFPKSPAAIAYQGLANKVMSWPVPSQPGGHLEFFVERLVQRPSYQEDKSGE >Mature_299_residues MHLSKAMTPDQASGLRMMNQPNNEKVKVIAVSGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGLRAER NLSHVLSGEAELDDVILRGPKGIGIIPATSGTQAMVELTQAQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQ DVLIVVCDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATVPFDENLRKSV RKQKLIVEAFPKSPAAIAYQGLANKVMSWPVPSQPGGHLEFFVERLVQRPSYQEDKSGE
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787423, Length=162, Percent_Identity=31.4814814814815, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI87082045, Length=283, Percent_Identity=25.7950530035336, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 32440; Mature: 32440
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLSKAMTPDQASGLRMMNQPNNEKVKVIAVSGGKGGVGKTSVSINTAVALAEKGKRVLV CCCCCCCCCCCCCCCCHHCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCEEEE LDADLGLANVDVMLGLRAERNLSHVLSGEAELDDVILRGPKGIGIIPATSGTQAMVELTQ EECCCCEECEEEEEECCCCCCHHHHHCCCCCHHHHHEECCCCCEEEECCCCCHHHHHHHH AQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQDVLIVVCDEPTSITDAYALI HHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH KILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATVPFDENLRKSV HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RKQKLIVEAFPKSPAAIAYQGLANKVMSWPVPSQPGGHLEFFVERLVQRPSYQEDKSGE HHHHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MHLSKAMTPDQASGLRMMNQPNNEKVKVIAVSGGKGGVGKTSVSINTAVALAEKGKRVLV CCCCCCCCCCCCCCCCHHCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCEEEE LDADLGLANVDVMLGLRAERNLSHVLSGEAELDDVILRGPKGIGIIPATSGTQAMVELTQ EECCCCEECEEEEEECCCCCCHHHHHCCCCCHHHHHEECCCCCEEEECCCCCHHHHHHHH AQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQDVLIVVCDEPTSITDAYALI HHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH KILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATVPFDENLRKSV HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RKQKLIVEAFPKSPAAIAYQGLANKVMSWPVPSQPGGHLEFFVERLVQRPSYQEDKSGE HHHHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]