The gene/protein map for NC_010334 is currently unavailable.
Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is ylxH [H]

Identifier: 167623395

GI number: 167623395

Start: 1762410

End: 1763309

Strand: Direct

Name: ylxH [H]

Synonym: Shal_1464

Alternate gene names: 167623395

Gene position: 1762410-1763309 (Clockwise)

Preceding gene: 167623394

Following gene: 167623396

Centisome position: 33.72

GC content: 46.89

Gene sequence:

>900_bases
ATGCATTTGAGTAAAGCCATGACTCCGGATCAAGCAAGCGGTTTACGTATGATGAATCAGCCAAATAATGAAAAAGTAAA
AGTAATCGCCGTATCAGGTGGTAAAGGTGGCGTTGGTAAAACCAGCGTGTCAATTAATACCGCCGTCGCGTTAGCCGAAA
AGGGTAAACGTGTGTTGGTATTAGACGCCGATTTAGGTCTAGCGAACGTCGATGTGATGTTAGGTTTGCGCGCAGAGCGA
AATTTATCTCATGTTTTGTCGGGAGAGGCCGAATTAGATGATGTGATCTTAAGAGGACCTAAAGGGATTGGTATTATTCC
TGCCACTTCGGGGACTCAGGCAATGGTCGAACTGACTCAAGCTCAGCATGCTGGTCTTATTCGTGCGTTTAGCGAAATGA
GAACCCAGTTTGATATCTTGATTGTCGATACCGCTGCTGGCATTTCTGATATGGTACTGAGCTTTTCACGGGCGTCACAA
GATGTATTAATTGTGGTGTGTGATGAGCCAACGTCGATCACCGATGCCTACGCCTTGATTAAGATTTTAAGTCGTGAACA
CGGGGTGTTCCGCTTTAAGATTGTCGCGAACATGGTACGCAGCTTACGGGAAGGCATGGAGCTTTTTGCCAAGTTAAGCA
AGGTGACCGACAGGTTCCTTGATGTGGCGTTAGAGCTTGTGGCCACGGTGCCATTTGATGAGAATTTACGTAAGTCTGTA
CGTAAGCAGAAATTGATTGTTGAGGCGTTTCCTAAGTCGCCAGCAGCCATTGCATACCAAGGGTTAGCGAATAAGGTTAT
GAGCTGGCCAGTCCCGTCACAACCCGGTGGCCATTTAGAGTTCTTCGTTGAGCGTTTGGTGCAGCGTCCAAGCTATCAAG
AGGATAAGTCGGGTGAATAA

Upstream 100 bases:

>100_bases
GTGGCTGATACATTATCGTTAGCCAATCGTGCATTAGCAGCATTAGATAACAAACCTACCGAACCAATACATAATAGTGA
AGGGTCGCAAGAGATGACCT

Downstream 100 bases:

>100_bases
AGCGGCAGCGTATACTCGTTTTGATAATAAGACGTCTATCGTTGAACAGTATGCACCGCTTGTAAAAAGAATAGCCCATC
ATCTTTTGGCTCGTTTACCC

Product: cobyrinic acid ac-diamide synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MHLSKAMTPDQASGLRMMNQPNNEKVKVIAVSGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGLRAER
NLSHVLSGEAELDDVILRGPKGIGIIPATSGTQAMVELTQAQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQ
DVLIVVCDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATVPFDENLRKSV
RKQKLIVEAFPKSPAAIAYQGLANKVMSWPVPSQPGGHLEFFVERLVQRPSYQEDKSGE

Sequences:

>Translated_299_residues
MHLSKAMTPDQASGLRMMNQPNNEKVKVIAVSGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGLRAER
NLSHVLSGEAELDDVILRGPKGIGIIPATSGTQAMVELTQAQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQ
DVLIVVCDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATVPFDENLRKSV
RKQKLIVEAFPKSPAAIAYQGLANKVMSWPVPSQPGGHLEFFVERLVQRPSYQEDKSGE
>Mature_299_residues
MHLSKAMTPDQASGLRMMNQPNNEKVKVIAVSGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGLRAER
NLSHVLSGEAELDDVILRGPKGIGIIPATSGTQAMVELTQAQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQ
DVLIVVCDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATVPFDENLRKSV
RKQKLIVEAFPKSPAAIAYQGLANKVMSWPVPSQPGGHLEFFVERLVQRPSYQEDKSGE

Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest

COG id: COG0455

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787423, Length=162, Percent_Identity=31.4814814814815, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082045, Length=283, Percent_Identity=25.7950530035336, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 32440; Mature: 32440

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLSKAMTPDQASGLRMMNQPNNEKVKVIAVSGGKGGVGKTSVSINTAVALAEKGKRVLV
CCCCCCCCCCCCCCCCHHCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCEEEE
LDADLGLANVDVMLGLRAERNLSHVLSGEAELDDVILRGPKGIGIIPATSGTQAMVELTQ
EECCCCEECEEEEEECCCCCCHHHHHCCCCCHHHHHEECCCCCEEEECCCCCHHHHHHHH
AQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQDVLIVVCDEPTSITDAYALI
HHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
KILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATVPFDENLRKSV
HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
RKQKLIVEAFPKSPAAIAYQGLANKVMSWPVPSQPGGHLEFFVERLVQRPSYQEDKSGE
HHHHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MHLSKAMTPDQASGLRMMNQPNNEKVKVIAVSGGKGGVGKTSVSINTAVALAEKGKRVLV
CCCCCCCCCCCCCCCCHHCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCEEEE
LDADLGLANVDVMLGLRAERNLSHVLSGEAELDDVILRGPKGIGIIPATSGTQAMVELTQ
EECCCCEECEEEEEECCCCCCHHHHHCCCCCHHHHHEECCCCCEEEECCCCCHHHHHHHH
AQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQDVLIVVCDEPTSITDAYALI
HHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
KILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATVPFDENLRKSV
HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
RKQKLIVEAFPKSPAAIAYQGLANKVMSWPVPSQPGGHLEFFVERLVQRPSYQEDKSGE
HHHHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7987014; 9384377 [H]