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The map label for this gene is flhF [H]

Identifier: 167623394

GI number: 167623394

Start: 1761011

End: 1762423

Strand: Direct

Name: flhF [H]

Synonym: Shal_1463

Alternate gene names: 167623394

Gene position: 1761011-1762423 (Clockwise)

Preceding gene: 167623393

Following gene: 167623395

Centisome position: 33.69

GC content: 46.07

Gene sequence:

>1413_bases
TTGAAGATTAAAAGATTTTTAGCAAAAGATATGCGTTCGGCCTTAGCCCAAGTTAAAGAAACGTTGGGGTCAGATGCCGT
CATTATGTCGAACAAGAAAGTGACGGGCGGCATTGAGATTGTTGCCGCAGTGGATTATGACGAGCCTAAGCCCAAGGTTG
CTGAAGCCAAGCCGTCGGCTGGCATGTTCACCGACCTTGCAGAAGAGAGAGTGACCTTAGGCGCACAGGCAAATGTCAGG
TCGCCTAATGTAAAAGCTCAAAGCCGTGCTCAACCCACGCCTGCGCCTGATTCACTGCAAGCGTTACTTGAGCGTCAGCA
AAGCCGAATTAGTCAGCAAACACAGCCTAGAAGCAGTGAAGATTTAGATATGCCTGAATGGGCGAAAGGGCTTCAGGCAC
AGGTGAAGAAACCGGAACCCGCTAAAGCTGAGTTTACTCCGCATCGTGCACCTGATAGCTTTAACGCGAACAAGCAAAAC
AGCAGTGCTGAAATGGACGCGATGAAACAAGAGTTAGCGTCAATTCGTAGCTTATTAACGCATCAAGTCAGTAGTTTGAT
GGTTGAACAGAAAAAACGGGTTGACCCTGTTGGTGCTATGCTAGAGAGCAAGTTGTTAGAGGCTGAGTTTTCTCCAGCAA
TTGCAAAGAAGCTATCGAGTCTTAGCGAGCATTATTCGCCCGCGGAATTAGTCGCCTCTTTGCCACGCAGTTTAGCTAAT
ATGCTCGATAATCAAGGTGATGATATTGTGCGTCAAGGTGGTGTGGTCGCATTCGTTGGGCCAACAGGTGTTGGCAAGAC
AACGACTGTGGCCAAATTAGCGGCGCGTTTTGCTGCATATCATGGCTCAGATCAAGTTGCGCTCATTACAACCGACCATT
ATCGCATTGGAGCCTTTGAGCAATTAGCAACTTATGGCAAAATAATGGGATGCCCCGTAAAACAGGCTCATGATTTTAGT
GAGTTAGAGCAAATACTGTATCAATTTAGGAACCGCAAGCTGGTTCTCATTGATACAGCGGGTATGGGGCAAAGAGACCA
GCGTTTATTCCAACAACTCGATAGCTTAGCCGCAAATAGCAGATTACCAATACGCAGTTATCTGGTAATGTCAGCAACGG
GGCAGCGTAGAGTGTTAGAAGATGCGGTAAAACAGTTTACGCGTATTCCACTTTCGGGTGCGGTACTAACAAAATTAGAT
GAATCAATTTCTTTAGCGCCAGCGCTAAGTGTCTTGATTCAAAGTGGGTTGCCTTTAAGTTATGTAACGGATGGACAAAG
AGTTCCTGAAGATATGCAGGTGGCTGATACATTATCGTTAGCCAATCGTGCATTAGCAGCATTAGATAACAAACCTACCG
AACCAATACATAATAGTGAAGGGTCGCAAGAGATGACCTATGCATTTGAGTAA

Upstream 100 bases:

>100_bases
AGCATACGATCCCTAATTTGCGGGTGATTTCATATCAAGAGGTACCCGATGAGAAGCAGATCCGTATCGTTTCGGCAGTG
GGCCAGTAGAGGTCGAATAA

Downstream 100 bases:

>100_bases
AGCCATGACTCCGGATCAAGCAAGCGGTTTACGTATGATGAATCAGCCAAATAATGAAAAAGTAAAAGTAATCGCCGTAT
CAGGTGGTAAAGGTGGCGTT

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MKIKRFLAKDMRSALAQVKETLGSDAVIMSNKKVTGGIEIVAAVDYDEPKPKVAEAKPSAGMFTDLAEERVTLGAQANVR
SPNVKAQSRAQPTPAPDSLQALLERQQSRISQQTQPRSSEDLDMPEWAKGLQAQVKKPEPAKAEFTPHRAPDSFNANKQN
SSAEMDAMKQELASIRSLLTHQVSSLMVEQKKRVDPVGAMLESKLLEAEFSPAIAKKLSSLSEHYSPAELVASLPRSLAN
MLDNQGDDIVRQGGVVAFVGPTGVGKTTTVAKLAARFAAYHGSDQVALITTDHYRIGAFEQLATYGKIMGCPVKQAHDFS
ELEQILYQFRNRKLVLIDTAGMGQRDQRLFQQLDSLAANSRLPIRSYLVMSATGQRRVLEDAVKQFTRIPLSGAVLTKLD
ESISLAPALSVLIQSGLPLSYVTDGQRVPEDMQVADTLSLANRALAALDNKPTEPIHNSEGSQEMTYAFE

Sequences:

>Translated_470_residues
MKIKRFLAKDMRSALAQVKETLGSDAVIMSNKKVTGGIEIVAAVDYDEPKPKVAEAKPSAGMFTDLAEERVTLGAQANVR
SPNVKAQSRAQPTPAPDSLQALLERQQSRISQQTQPRSSEDLDMPEWAKGLQAQVKKPEPAKAEFTPHRAPDSFNANKQN
SSAEMDAMKQELASIRSLLTHQVSSLMVEQKKRVDPVGAMLESKLLEAEFSPAIAKKLSSLSEHYSPAELVASLPRSLAN
MLDNQGDDIVRQGGVVAFVGPTGVGKTTTVAKLAARFAAYHGSDQVALITTDHYRIGAFEQLATYGKIMGCPVKQAHDFS
ELEQILYQFRNRKLVLIDTAGMGQRDQRLFQQLDSLAANSRLPIRSYLVMSATGQRRVLEDAVKQFTRIPLSGAVLTKLD
ESISLAPALSVLIQSGLPLSYVTDGQRVPEDMQVADTLSLANRALAALDNKPTEPIHNSEGSQEMTYAFE
>Mature_470_residues
MKIKRFLAKDMRSALAQVKETLGSDAVIMSNKKVTGGIEIVAAVDYDEPKPKVAEAKPSAGMFTDLAEERVTLGAQANVR
SPNVKAQSRAQPTPAPDSLQALLERQQSRISQQTQPRSSEDLDMPEWAKGLQAQVKKPEPAKAEFTPHRAPDSFNANKQN
SSAEMDAMKQELASIRSLLTHQVSSLMVEQKKRVDPVGAMLESKLLEAEFSPAIAKKLSSLSEHYSPAELVASLPRSLAN
MLDNQGDDIVRQGGVVAFVGPTGVGKTTTVAKLAARFAAYHGSDQVALITTDHYRIGAFEQLATYGKIMGCPVKQAHDFS
ELEQILYQFRNRKLVLIDTAGMGQRDQRLFQQLDSLAANSRLPIRSYLVMSATGQRRVLEDAVKQFTRIPLSGAVLTKLD
ESISLAPALSVLIQSGLPLSYVTDGQRVPEDMQVADTLSLANRALAALDNKPTEPIHNSEGSQEMTYAFE

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1789874, Length=192, Percent_Identity=32.2916666666667, Blast_Score=78, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6325345, Length=186, Percent_Identity=26.8817204301075, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 51255; Mature: 51255

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKRFLAKDMRSALAQVKETLGSDAVIMSNKKVTGGIEIVAAVDYDEPKPKVAEAKPSA
CCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEECCCEEEEEEECCCCCCCCCCCCCCCC
GMFTDLAEERVTLGAQANVRSPNVKAQSRAQPTPAPDSLQALLERQQSRISQQTQPRSSE
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
DLDMPEWAKGLQAQVKKPEPAKAEFTPHRAPDSFNANKQNSSAEMDAMKQELASIRSLLT
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
HQVSSLMVEQKKRVDPVGAMLESKLLEAEFSPAIAKKLSSLSEHYSPAELVASLPRSLAN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
MLDNQGDDIVRQGGVVAFVGPTGVGKTTTVAKLAARFAAYHGSDQVALITTDHYRIGAFE
HHCCCCCHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHH
QLATYGKIMGCPVKQAHDFSELEQILYQFRNRKLVLIDTAGMGQRDQRLFQQLDSLAANS
HHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
RLPIRSYLVMSATGQRRVLEDAVKQFTRIPLSGAVLTKLDESISLAPALSVLIQSGLPLS
CCCHHHHHEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
YVTDGQRVPEDMQVADTLSLANRALAALDNKPTEPIHNSEGSQEMTYAFE
EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MKIKRFLAKDMRSALAQVKETLGSDAVIMSNKKVTGGIEIVAAVDYDEPKPKVAEAKPSA
CCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEECCCEEEEEEECCCCCCCCCCCCCCCC
GMFTDLAEERVTLGAQANVRSPNVKAQSRAQPTPAPDSLQALLERQQSRISQQTQPRSSE
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
DLDMPEWAKGLQAQVKKPEPAKAEFTPHRAPDSFNANKQNSSAEMDAMKQELASIRSLLT
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
HQVSSLMVEQKKRVDPVGAMLESKLLEAEFSPAIAKKLSSLSEHYSPAELVASLPRSLAN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
MLDNQGDDIVRQGGVVAFVGPTGVGKTTTVAKLAARFAAYHGSDQVALITTDHYRIGAFE
HHCCCCCHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHH
QLATYGKIMGCPVKQAHDFSELEQILYQFRNRKLVLIDTAGMGQRDQRLFQQLDSLAANS
HHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
RLPIRSYLVMSATGQRRVLEDAVKQFTRIPLSGAVLTKLDESISLAPALSVLIQSGLPLS
CCCHHHHHEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
YVTDGQRVPEDMQVADTLSLANRALAALDNKPTEPIHNSEGSQEMTYAFE
EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]